RNA–Protein interactions for RNA: ENST00000493758.5

ITGB1-216, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 366 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-216ENST00000493758 TRPM4Q8TD43 1214 aa8.23□□□□□ -1.09
ITGB1-216ENST00000493758 BTBD6Q96KE9 485 aa8.23□□□□□ -1.09
ITGB1-216ENST00000493758 PATL2C9JE40 543 aaKnown RBP8.22□□□□□ -1.09
ITGB1-216ENST00000493758 ZNF211Q13398 564 aaPredicted RBP8.22□□□□□ -1.09
ITGB1-216ENST00000493758 MTMR3Q13615 1198 aa8.22□□□□□ -1.09
ITGB1-216ENST00000493758 ECM1Q16610 540 aa8.22□□□□□ -1.09
ITGB1-216ENST00000493758 NLRP13Q86W25 1043 aa8.22□□□□□ -1.09
ITGB1-216ENST00000493758 NEDD1Q8NHV4 660 aa8.22□□□□□ -1.09
ITGB1-216ENST00000493758 SCARF2Q96GP6 870 aaPredicted RBP8.22□□□□□ -1.09
ITGB1-216ENST00000493758 H3BRB1 525 aa8.21□□□□□ -1.1
ITGB1-216ENST00000493758 PDGFAP04085 211 aa8.21□□□□□ -1.1
ITGB1-216ENST00000493758 RARAP10276 462 aa8.21□□□□□ -1.1
ITGB1-216ENST00000493758 ALAS2P22557 587 aa8.21□□□□□ -1.1
ITGB1-216ENST00000493758 USP5P45974 858 aa8.21□□□□□ -1.1
ITGB1-216ENST00000493758 NRLP54845 237 aa8.21□□□□□ -1.1
ITGB1-216ENST00000493758 XKR5Q6UX68 686 aa8.21□□□□□ -1.1
ITGB1-216ENST00000493758 DHX32Q7L7V1 743 aaKnown RBP8.21□□□□□ -1.1
ITGB1-216ENST00000493758 CMTR1Q8N1G2 835 aaKnown RBP8.21□□□□□ -1.1
ITGB1-216ENST00000493758 GPR152Q8TDT2 470 aa8.21□□□□□ -1.1
ITGB1-216ENST00000493758 TUT1Q9H6E5 874 aaKnown RBP8.21□□□□□ -1.1
ITGB1-216ENST00000493758 TLR7Q9NYK1 1049 aaKnown RBP8.21□□□□□ -1.1
ITGB1-216ENST00000493758 SLC6A14Q9UN76 642 aa8.21□□□□□ -1.1
ITGB1-216ENST00000493758 USP20Q9Y2K6 914 aa8.21□□□□□ -1.1
ITGB1-216ENST00000493758 UBAP1LF5GYI3 381 aa8.2□□□□□ -1.1
ITGB1-216ENST00000493758 PIK3R2O00459 728 aa8.2□□□□□ -1.1
ITGB1-216ENST00000493758 FZD6O60353 706 aa8.2□□□□□ -1.1
ITGB1-216ENST00000493758 ABL1P00519 1130 aa8.2□□□□□ -1.1
ITGB1-216ENST00000493758 ARHGAP4P98171 946 aa8.2□□□□□ -1.1
ITGB1-216ENST00000493758 PODNQ7Z5L7 613 aa8.2□□□□□ -1.1
ITGB1-216ENST00000493758 ATCAYQ86WG3 371 aa8.2□□□□□ -1.1
ITGB1-216ENST00000493758 GJD3Q8N144 294 aa8.2□□□□□ -1.1
ITGB1-216ENST00000493758 NUDT16Q96DE0 195 aaKnown RBP8.2□□□□□ -1.1
ITGB1-216ENST00000493758 DNAJB12Q9NXW2 375 aaKnown RBP8.2□□□□□ -1.1
ITGB1-216ENST00000493758 SASH3O75995 380 aa8.19□□□□□ -1.1
ITGB1-216ENST00000493758 PCSK2P16519 638 aa8.19□□□□□ -1.1
ITGB1-216ENST00000493758 TARSP26639 723 aaKnown RBP8.19□□□□□ -1.1
ITGB1-216ENST00000493758 KCNMA1Q12791 1236 aa8.19□□□□□ -1.1
ITGB1-216ENST00000493758 C20orf204Q6ZNR8 217 aa8.19□□□□□ -1.1
ITGB1-216ENST00000493758 GLYCTKQ8IVS8 523 aa8.19□□□□□ -1.1
ITGB1-216ENST00000493758 UBE2OQ9C0C9 1292 aaKnown RBP8.19□□□□□ -1.1
ITGB1-216ENST00000493758 FRRS1LQ9P0K9 344 aa8.19□□□□□ -1.1
ITGB1-216ENST00000493758 NAGPAQ9UK23 515 aa8.19□□□□□ -1.1
ITGB1-216ENST00000493758 MKL2Q9ULH7 1088 aa8.19□□□□□ -1.1
ITGB1-216ENST00000493758 STARD13Q9Y3M8 1113 aa8.19□□□□□ -1.1
ITGB1-216ENST00000493758 SOWAHDA6NJG2 315 aa8.18□□□□□ -1.1
ITGB1-216ENST00000493758 PHF20L1A8MW92 1017 aa8.18□□□□□ -1.1
ITGB1-216ENST00000493758 MARSP56192 900 aaKnown RBP8.18□□□□□ -1.1
ITGB1-216ENST00000493758 EHHADHQ08426 723 aa8.18□□□□□ -1.1
ITGB1-216ENST00000493758 LINC00114Q6XXX2 140 aa8.18□□□□□ -1.1
ITGB1-216ENST00000493758 ALYREFQ86V81 257 aaKnown RBP8.18□□□□□ -1.1
ITGB1-216ENST00000493758 BEND7Q8N7W2 519 aaPredicted RBP8.18□□□□□ -1.1
ITGB1-216ENST00000493758 OR13H1Q8NG92 308 aa8.18□□□□□ -1.1
ITGB1-216ENST00000493758 EDEM1Q92611 657 aa8.18□□□□□ -1.1
ITGB1-216ENST00000493758 GNB5O14775 395 aa8.17□□□□□ -1.1
ITGB1-216ENST00000493758 MMP20O60882 483 aa8.17□□□□□ -1.1
ITGB1-216ENST00000493758 AMPD1P23109 780 aa8.17□□□□□ -1.1
ITGB1-216ENST00000493758 GSK3AP49840 483 aa8.17□□□□□ -1.1
ITGB1-216ENST00000493758 SNRPNP63162 240 aaKnown RBP8.17□□□□□ -1.1
ITGB1-216ENST00000493758 PLAURQ03405 335 aa8.17□□□□□ -1.1
ITGB1-216ENST00000493758 ABI2Q9NYB9 513 aaPredicted RBP8.17□□□□□ -1.1
ITGB1-216ENST00000493758 PSAPP07602 524 aa8.16□□□□□ -1.1
ITGB1-216ENST00000493758 KRT25Q7Z3Z0 450 aa8.16□□□□□ -1.1
ITGB1-216ENST00000493758 TTC9Q92623 222 aa8.16□□□□□ -1.1
ITGB1-216ENST00000493758 CITED4Q96RK1 184 aa8.16□□□□□ -1.1
ITGB1-216ENST00000493758 ZBTB42B2RXF5 422 aa8.15□□□□□ -1.1
ITGB1-216ENST00000493758 KIF4AO95239 1232 aa8.15□□□□□ -1.1
ITGB1-216ENST00000493758 ALBP02768 609 aa8.15□□□□□ -1.1
ITGB1-216ENST00000493758 DNM1Q05193 864 aaKnown RBP8.15□□□□□ -1.1
ITGB1-216ENST00000493758 COL9A3Q14050 684 aaPredicted RBP8.15□□□□□ -1.1
ITGB1-216ENST00000493758 MICALL1Q8N3F8 863 aa8.15□□□□□ -1.1
ITGB1-216ENST00000493758 ELP3Q9H9T3 547 aa8.15□□□□□ -1.1
ITGB1-216ENST00000493758 ANO2Q9NQ90 1003 aa8.15□□□□□ -1.1
ITGB1-216ENST00000493758 POLIQ9UNA4 740 aa8.15□□□□□ -1.1
ITGB1-216ENST00000493758 ZNF438Q7Z4V0 828 aa8.14□□□□□ -1.11
ITGB1-216ENST00000493758 M0R082 166 aa8.13□□□□□ -1.11
ITGB1-216ENST00000493758 NDUFB5O43674 189 aa8.13□□□□□ -1.11
ITGB1-216ENST00000493758 NID1P14543 1247 aa8.13□□□□□ -1.11
ITGB1-216ENST00000493758 ILDR2Q71H61 639 aa8.13□□□□□ -1.11
ITGB1-216ENST00000493758 FAM35AQ86V20 835 aa8.13□□□□□ -1.11
ITGB1-216ENST00000493758 ZNF417Q8TAU3 575 aa8.13□□□□□ -1.11
ITGB1-216ENST00000493758 SNX29Q8TEQ0 813 aa8.13□□□□□ -1.11
ITGB1-216ENST00000493758 ZNF587Q96SQ5 575 aaPredicted RBP8.13□□□□□ -1.11
ITGB1-216ENST00000493758 FAM129BQ96TA1 746 aa8.13□□□□□ -1.11
ITGB1-216ENST00000493758 LPIN3Q9BQK8 851 aa8.13□□□□□ -1.11
ITGB1-216ENST00000493758 GGNBP2Q9H3C7 697 aa8.13□□□□□ -1.11
ITGB1-216ENST00000493758 NOP53Q9NZM5 478 aaKnown RBP8.13□□□□□ -1.11
ITGB1-216ENST00000493758 TMEM63CQ9P1W3 806 aa8.13□□□□□ -1.11
ITGB1-216ENST00000493758 CNTNAP5Q8WYK1 1306 aa8.12□□□□□ -1.11
ITGB1-216ENST00000493758 IGHA2P01877 340 aa8.12□□□□□ -1.11
ITGB1-216ENST00000493758 PDIA4P13667 645 aaKnown RBP8.12□□□□□ -1.11
ITGB1-216ENST00000493758 KCTD17Q8N5Z5 321 aa8.12□□□□□ -1.11
ITGB1-216ENST00000493758 RBCK1Q9BYM8 510 aa8.12□□□□□ -1.11
ITGB1-216ENST00000493758 RRAGCQ9HB90 399 aa8.12□□□□□ -1.11
ITGB1-216ENST00000493758 CCDC87Q9NVE4 849 aa8.12□□□□□ -1.11
ITGB1-216ENST00000493758 IVNS1ABPQ9Y6Y0 642 aa8.12□□□□□ -1.11
ITGB1-216ENST00000493758 LILRB5O75023 590 aa8.11□□□□□ -1.11
ITGB1-216ENST00000493758 PERM1Q5SV97 790 aa8.11□□□□□ -1.11
ITGB1-216ENST00000493758 TTC39BQ5VTQ0 682 aaPredicted RBP8.11□□□□□ -1.11
ITGB1-216ENST00000493758 PSAPL1Q6NUJ1 521 aa8.11□□□□□ -1.11
ITGB1-216ENST00000493758 TRIM11Q96F44 468 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms