RNA–Protein interactions for RNA: ENST00000493522.6

CTSA-209, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 901 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-209ENST00000493522 KLRG2A4D1S0 409 aaPredicted RBP14.74□□□□□ -0.05
CTSA-209ENST00000493522 FKBP4Q02790 459 aaKnown RBP eCLIP14.74□□□□□ -0.05
CTSA-209ENST00000493522 C7orf43Q8WVR3 580 aa14.74□□□□□ -0.05
CTSA-209ENST00000493522 DNAAF4Q8WXU2 420 aa14.74□□□□□ -0.05
CTSA-209ENST00000493522 UTP14AQ9BVJ6 771 aaKnown RBP14.74□□□□□ -0.05
CTSA-209ENST00000493522 RIC1Q4ADV7 1423 aa14.74□□□□□ -0.05
CTSA-209ENST00000493522 F6X3S4 739 aa14.73□□□□□ -0.05
CTSA-209ENST00000493522 RARSP54136 660 aaKnown RBP14.73□□□□□ -0.05
CTSA-209ENST00000493522 RTKN2Q8IZC4 609 aa14.73□□□□□ -0.05
CTSA-209ENST00000493522 TAF1DQ9H5J8 278 aaPredicted RBP14.73□□□□□ -0.05
CTSA-209ENST00000493522 TRMT112Q9UI30 125 aaKnown RBP14.73□□□□□ -0.05
CTSA-209ENST00000493522 CNTNAP1P78357 1384 aa14.73□□□□□ -0.05
CTSA-209ENST00000493522 PTPRCP08575 1304 aa14.72□□□□□ -0.05
CTSA-209ENST00000493522 RNF123Q5XPI4 1314 aa14.72□□□□□ -0.05
CTSA-209ENST00000493522 KIF16BQ96L93 1317 aa14.72□□□□□ -0.05
CTSA-209ENST00000493522 PASKQ96RG2 1323 aa14.72□□□□□ -0.05
CTSA-209ENST00000493522 SCN4AP35499 1836 aa14.72□□□□□ -0.05
CTSA-209ENST00000493522 ALDH1B1P30837 517 aa14.72□□□□□ -0.05
CTSA-209ENST00000493522 MAPK8IP2Q13387 824 aaPredicted RBP14.72□□□□□ -0.05
CTSA-209ENST00000493522 ZNF277Q9NRM2 450 aaPredicted RBP14.72□□□□□ -0.05
CTSA-209ENST00000493522 SH3TC1Q8TE82 1336 aa14.71□□□□□ -0.05
CTSA-209ENST00000493522 EAPPQ56P03 285 aaPredicted RBP14.71□□□□□ -0.05
CTSA-209ENST00000493522 CWC25Q9NXE8 425 aaPredicted RBP14.71□□□□□ -0.05
CTSA-209ENST00000493522 HACL1Q9UJ83 578 aa14.71□□□□□ -0.05
CTSA-209ENST00000493522 ZNF541Q9H0D2 1346 aa14.7□□□□□ -0.06
CTSA-209ENST00000493522 TMEM88BA6NKF7 163 aa14.7□□□□□ -0.06
CTSA-209ENST00000493522 IGKV5-2P06315 115 aa14.7□□□□□ -0.06
CTSA-209ENST00000493522 TRIM28Q13263 835 aaKnown RBP14.7□□□□□ -0.06
CTSA-209ENST00000493522 CWF19L2Q2TBE0 894 aaKnown RBP14.7□□□□□ -0.06
CTSA-209ENST00000493522 RTL5Q5HYW3 569 aaPredicted RBP14.7□□□□□ -0.06
CTSA-209ENST00000493522 SLC4A10Q6U841 1118 aa14.7□□□□□ -0.06
CTSA-209ENST00000493522 PNMA8AQ86V59 439 aaPredicted RBP14.7□□□□□ -0.06
CTSA-209ENST00000493522 CCDC191Q8NCU4 936 aa14.7□□□□□ -0.06
CTSA-209ENST00000493522 NEURL1BA8MQ27 555 aa14.69□□□□□ -0.06
CTSA-209ENST00000493522 IARSP41252 1262 aaKnown RBP14.69□□□□□ -0.06
CTSA-209ENST00000493522 OLFM4Q6UX06 510 aa14.69□□□□□ -0.06
CTSA-209ENST00000493522 LINS1Q8NG48 757 aa14.69□□□□□ -0.06
CTSA-209ENST00000493522 CLEC11AQ9Y240 323 aa14.69□□□□□ -0.06
CTSA-209ENST00000493522 FZD9O00144 591 aa14.68□□□□□ -0.06
CTSA-209ENST00000493522 BCAR3O75815 825 aa14.68□□□□□ -0.06
CTSA-209ENST00000493522 EPHX2P34913 555 aa14.68□□□□□ -0.06
CTSA-209ENST00000493522 GPC2Q8N158 579 aa14.68□□□□□ -0.06
CTSA-209ENST00000493522 SYNE4Q8N205 404 aa14.68□□□□□ -0.06
CTSA-209ENST00000493522 JDP2Q8WYK2 163 aa14.68□□□□□ -0.06
CTSA-209ENST00000493522 AIDAQ96BJ3 306 aa14.68□□□□□ -0.06
CTSA-209ENST00000493522 FAM89AQ96GI7 184 aa14.68□□□□□ -0.06
CTSA-209ENST00000493522 PSMD1Q99460 953 aa14.68□□□□□ -0.06
CTSA-209ENST00000493522 NOB1Q9ULX3 412 aaKnown RBP14.68□□□□□ -0.06
CTSA-209ENST00000493522 ITGBL1O95965 494 aaPredicted RBP14.67□□□□□ -0.06
CTSA-209ENST00000493522 HCLS1P14317 486 aaPredicted RBP14.67□□□□□ -0.06
CTSA-209ENST00000493522 BRPF1P55201 1214 aaPredicted RBP14.67□□□□□ -0.06
CTSA-209ENST00000493522 CRY2Q49AN0 593 aa14.67□□□□□ -0.06
CTSA-209ENST00000493522 CC2D2BQ6DHV5 1058 aa14.67□□□□□ -0.06
CTSA-209ENST00000493522 ZBTB38Q8NAP3 1195 aaPredicted RBP14.67□□□□□ -0.06
CTSA-209ENST00000493522 JARID2Q92833 1246 aaPredicted RBP14.67□□□□□ -0.06
CTSA-209ENST00000493522 FRAT1Q92837 279 aaPredicted RBP14.67□□□□□ -0.06
CTSA-209ENST00000493522 API5Q9BZZ5 524 aaKnown RBP14.67□□□□□ -0.06
CTSA-209ENST00000493522 LRRC37AA6NMS7 1700 aa14.66□□□□□ -0.06
CTSA-209ENST00000493522 IRS4O14654 1257 aaPredicted RBP14.66□□□□□ -0.06
CTSA-209ENST00000493522 FOXN1O15353 648 aa14.66□□□□□ -0.06
CTSA-209ENST00000493522 PCCAP05165 728 aaPredicted RBP14.66□□□□□ -0.06
CTSA-209ENST00000493522 VEGFBP49765 207 aa14.66□□□□□ -0.06
CTSA-209ENST00000493522 GCKRQ14397 625 aa14.66□□□□□ -0.06
CTSA-209ENST00000493522 BEND3Q5T5X7 828 aa14.66□□□□□ -0.06
CTSA-209ENST00000493522 UBE3BQ7Z3V4 1068 aa14.66□□□□□ -0.06
CTSA-209ENST00000493522 RPGRQ92834 1020 aaKnown RBP14.66□□□□□ -0.06
CTSA-209ENST00000493522 SRCIN1Q9C0H9 1055 aa14.66□□□□□ -0.06
CTSA-209ENST00000493522 PRDM10Q9NQV6 1147 aa14.66□□□□□ -0.06
CTSA-209ENST00000493522 CDHR2Q9BYE9 1310 aa14.66□□□□□ -0.06
CTSA-209ENST00000493522 CTCFP49711 727 aaPredicted RBP14.65□□□□□ -0.06
CTSA-209ENST00000493522 GRIPAP1Q4V328 841 aa14.65□□□□□ -0.06
CTSA-209ENST00000493522 SLC10A5Q5PT55 438 aa14.65□□□□□ -0.06
CTSA-209ENST00000493522 C3orf67Q6ZVT6 689 aa14.65□□□□□ -0.06
CTSA-209ENST00000493522 CNTROBQ8N137 903 aa14.65□□□□□ -0.06
CTSA-209ENST00000493522 NLRP3Q96P20 1036 aa14.65□□□□□ -0.06
CTSA-209ENST00000493522 SNED1Q8TER0 1413 aa14.65□□□□□ -0.06
CTSA-209ENST00000493522 A0A1B0GUL6 1792 aa14.65□□□□□ -0.06
CTSA-209ENST00000493522 ADAMTSL1Q8N6G6 1762 aa14.65□□□□□ -0.06
CTSA-209ENST00000493522 IPO8O15397 1037 aaKnown RBP14.64□□□□□ -0.07
CTSA-209ENST00000493522 ALDH1L1O75891 902 aa14.64□□□□□ -0.07
CTSA-209ENST00000493522 LMOD1P29536 600 aaPredicted RBP14.64□□□□□ -0.07
CTSA-209ENST00000493522 EIF6P56537 245 aaKnown RBP14.64□□□□□ -0.07
CTSA-209ENST00000493522 MAP1SQ66K74 1059 aaPredicted RBP14.64□□□□□ -0.07
CTSA-209ENST00000493522 RCAN3Q9UKA8 241 aa14.64□□□□□ -0.07
CTSA-209ENST00000493522 COL4A1P02462 1669 aa14.64□□□□□ -0.07
CTSA-209ENST00000493522 RASSF10A6NK89 507 aa14.63□□□□□ -0.07
CTSA-209ENST00000493522 HSP90B1P14625 803 aaKnown RBP14.63□□□□□ -0.07
CTSA-209ENST00000493522 ZKSCAN2Q63HK3 967 aa14.63□□□□□ -0.07
CTSA-209ENST00000493522 C9orf78Q9NZ63 289 aaPredicted RBP14.63□□□□□ -0.07
CTSA-209ENST00000493522 GJA3Q9Y6H8 435 aa14.63□□□□□ -0.07
CTSA-209ENST00000493522 ABCC4O15439 1325 aa14.63□□□□□ -0.07
CTSA-209ENST00000493522 GRM8O00222 908 aa14.62□□□□□ -0.07
CTSA-209ENST00000493522 TRIM27P14373 513 aa14.62□□□□□ -0.07
CTSA-209ENST00000493522 HOXA10P31260 410 aaPredicted RBP14.62□□□□□ -0.07
CTSA-209ENST00000493522 CCT4P50991 539 aaKnown RBP14.62□□□□□ -0.07
CTSA-209ENST00000493522 DEFB115Q30KQ5 88 aa14.62□□□□□ -0.07
CTSA-209ENST00000493522 ATF7IPQ6VMQ6 1270 aa14.62□□□□□ -0.07
CTSA-209ENST00000493522 ARHGAP45Q92619 1136 aa14.62□□□□□ -0.07
CTSA-209ENST00000493522 RBM17Q96I25 401 aaKnown RBP14.62□□□□□ -0.07
CTSA-209ENST00000493522 TNNQ9UQP3 1299 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms