RNA–Protein interactions for RNA: ENST00000493456.5

NUP50-218, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-218ENST00000493456 BRPF1P55201 1214 aaPredicted RBP23.27■■□□□ 1.32
NUP50-218ENST00000493456 TNIP1Q15025 636 aa23.27■■□□□ 1.32
NUP50-218ENST00000493456 HSP90AB3PQ58FF7 597 aa23.27■■□□□ 1.32
NUP50-218ENST00000493456 MPNDQ8N594 471 aa23.27■■□□□ 1.32
NUP50-218ENST00000493456 ANKRD36CQ5JPF3 1778 aa23.27■■□□□ 1.32
NUP50-218ENST00000493456 MLLT1Q03111 559 aaPredicted RBP23.26■■□□□ 1.31
NUP50-218ENST00000493456 PDIA6Q15084 440 aa23.26■■□□□ 1.31
NUP50-218ENST00000493456 BCL2L13Q9BXK5 485 aa23.26■■□□□ 1.31
NUP50-218ENST00000493456 GLIS2Q9BZE0 524 aaPredicted RBP23.26■■□□□ 1.31
NUP50-218ENST00000493456 LAMB2P55268 1798 aa23.25■■□□□ 1.31
NUP50-218ENST00000493456 TSKSQ9UJT2 592 aa23.25■■□□□ 1.31
NUP50-218ENST00000493456 DDX46Q7L014 1031 aaKnown RBP23.24■■□□□ 1.31
NUP50-218ENST00000493456 CDC37L1Q7L3B6 337 aa23.24■■□□□ 1.31
NUP50-218ENST00000493456 BABAM1Q9NWV8 329 aa23.24■■□□□ 1.31
NUP50-218ENST00000493456 RAD17O75943 681 aa23.23■■□□□ 1.31
NUP50-218ENST00000493456 EIF2S2P20042 333 aaKnown RBP23.23■■□□□ 1.31
NUP50-218ENST00000493456 GRAPQ13588 217 aa23.23■■□□□ 1.31
NUP50-218ENST00000493456 TMC4Q7Z404 712 aa23.23■■□□□ 1.31
NUP50-218ENST00000493456 GRAPLQ8TC17 118 aaPredicted RBP23.23■■□□□ 1.31
NUP50-218ENST00000493456 PROSER3Q2NL68 480 aa23.22■■□□□ 1.31
NUP50-218ENST00000493456 NLRP10Q86W26 655 aa23.22■■□□□ 1.31
NUP50-218ENST00000493456 ZNF408Q9H9D4 720 aa23.22■■□□□ 1.31
NUP50-218ENST00000493456 HCLS1P14317 486 aaPredicted RBP23.21■■□□□ 1.31
NUP50-218ENST00000493456 HIRAP54198 1017 aaPredicted RBP23.21■■□□□ 1.31
NUP50-218ENST00000493456 LRRC37AA6NMS7 1700 aa23.2■■□□□ 1.3
NUP50-218ENST00000493456 SH3TC1Q8TE82 1336 aa23.2■■□□□ 1.3
NUP50-218ENST00000493456 H7C1D1 291 aa23.2■■□□□ 1.3
NUP50-218ENST00000493456 NOGQ13253 232 aa23.2■■□□□ 1.3
NUP50-218ENST00000493456 TRPM4Q8TD43 1214 aa23.2■■□□□ 1.3
NUP50-218ENST00000493456 TRMT112Q9UI30 125 aaKnown RBP23.2■■□□□ 1.3
NUP50-218ENST00000493456 CNOT7Q9UIV1 285 aaKnown RBP23.2■■□□□ 1.3
NUP50-218ENST00000493456 DUOX1Q9NRD9 1551 aa23.19■■□□□ 1.3
NUP50-218ENST00000493456 TNRC18O15417 2968 aaPredicted RBP23.19■■□□□ 1.3
NUP50-218ENST00000493456 ANXA1P04083 346 aa23.19■■□□□ 1.3
NUP50-218ENST00000493456 COPS6Q7L5N1 327 aa23.19■■□□□ 1.3
NUP50-218ENST00000493456 MCOLN1Q9GZU1 580 aa23.19■■□□□ 1.3
NUP50-218ENST00000493456 YDJCA8MPS7 323 aa23.18■■□□□ 1.3
NUP50-218ENST00000493456 TCIRG1Q13488 830 aa23.18■■□□□ 1.3
NUP50-218ENST00000493456 XAGE3Q8WTP9 111 aa23.18■■□□□ 1.3
NUP50-218ENST00000493456 DPF2Q92785 391 aa23.18■■□□□ 1.3
NUP50-218ENST00000493456 LMOD3Q0VAK6 560 aa23.17■■□□□ 1.3
NUP50-218ENST00000493456 MICALL2Q8IY33 904 aa23.17■■□□□ 1.3
NUP50-218ENST00000493456 HUNKP57058 714 aa23.16■■□□□ 1.3
NUP50-218ENST00000493456 RIPK4P57078 832 aa23.16■■□□□ 1.3
NUP50-218ENST00000493456 AIMP1Q12904 312 aaKnown RBP23.16■■□□□ 1.3
NUP50-218ENST00000493456 SHTN1A0MZ66 631 aa23.14■■□□□ 1.29
NUP50-218ENST00000493456 DGKZQ13574 1117 aa23.14■■□□□ 1.29
NUP50-218ENST00000493456 WASHC4Q2M389 1173 aa23.14■■□□□ 1.29
NUP50-218ENST00000493456 USP48Q86UV5 1035 aa23.14■■□□□ 1.29
NUP50-218ENST00000493456 CFAP44Q96MT7 982 aa23.14■■□□□ 1.29
NUP50-218ENST00000493456 CASP8AP2Q9UKL3 1982 aa23.14■■□□□ 1.29
NUP50-218ENST00000493456 RPS12P25398 132 aaKnown RBP23.13■■□□□ 1.29
NUP50-218ENST00000493456 NECTIN2Q92692 538 aa23.13■■□□□ 1.29
NUP50-218ENST00000493456 PSMD14O00487 310 aa23.12■■□□□ 1.29
NUP50-218ENST00000493456 DDX60Q8IY21 1712 aaKnown RBP23.12■■□□□ 1.29
NUP50-218ENST00000493456 ZBTB12Q9Y330 459 aaPredicted RBP23.12■■□□□ 1.29
NUP50-218ENST00000493456 TAF1P21675 1872 aa23.11■■□□□ 1.29
NUP50-218ENST00000493456 SAMD7Q7Z3H4 446 aa23.11■■□□□ 1.29
NUP50-218ENST00000493456 KRT26Q7Z3Y9 468 aa23.11■■□□□ 1.29
NUP50-218ENST00000493456 SAGE1Q9NXZ1 904 aa23.11■■□□□ 1.29
NUP50-218ENST00000493456 TMPOP42166 694 aaKnown RBP23.1■■□□□ 1.29
NUP50-218ENST00000493456 SF3B3Q15393 1217 aaKnown RBP23.1■■□□□ 1.29
NUP50-218ENST00000493456 RGMBQ6NW40 437 aa23.1■■□□□ 1.29
NUP50-218ENST00000493456 C2orf69Q8N8R5 385 aa23.1■■□□□ 1.29
NUP50-218ENST00000493456 CCDC102AQ96A19 550 aa23.1■■□□□ 1.29
NUP50-218ENST00000493456 ZIC5Q96T25 663 aa23.1■■□□□ 1.29
NUP50-218ENST00000493456 EYA3Q99504 573 aa23.1■■□□□ 1.29
NUP50-218ENST00000493456 DBNDD1Q9H9R9 158 aa23.1■■□□□ 1.29
NUP50-218ENST00000493456 GBA2Q9HCG7 927 aaPredicted RBP23.1■■□□□ 1.29
NUP50-218ENST00000493456 NSFL1CQ9UNZ2 370 aaKnown RBP23.1■■□□□ 1.29
NUP50-218ENST00000493456 TBC1D10BQ4KMP7 808 aaPredicted RBP23.09■■□□□ 1.29
NUP50-218ENST00000493456 PLBD2Q8NHP8 589 aa23.09■■□□□ 1.29
NUP50-218ENST00000493456 DCPSQ96C86 337 aaKnown RBP23.09■■□□□ 1.29
NUP50-218ENST00000493456 FAM155AB1AL88 458 aaPredicted RBP23.08■■□□□ 1.29
NUP50-218ENST00000493456 CELF1Q92879 486 aaKnown RBP23.08■■□□□ 1.29
NUP50-218ENST00000493456 C6orf229H3BNL8 230 aa23.07■■□□□ 1.28
NUP50-218ENST00000493456 ECE2O60344 883 aa23.07■■□□□ 1.28
NUP50-218ENST00000493456 ISCA1Q9BUE6 129 aa23.07■■□□□ 1.28
NUP50-218ENST00000493456 CHPF2Q9P2E5 772 aa23.07■■□□□ 1.28
NUP50-218ENST00000493456 POLLQ9UGP5 575 aa23.07■■□□□ 1.28
NUP50-218ENST00000493456 CHL1O00533 1208 aa23.06■■□□□ 1.28
NUP50-218ENST00000493456 RIMBP2O15034 1052 aa23.06■■□□□ 1.28
NUP50-218ENST00000493456 EGFRP00533 1210 aa23.06■■□□□ 1.28
NUP50-218ENST00000493456 HOXB7P09629 217 aa23.06■■□□□ 1.28
NUP50-218ENST00000493456 ANKRD13DQ6ZTN6 518 aa23.06■■□□□ 1.28
NUP50-218ENST00000493456 FAM89AQ96GI7 184 aa23.06■■□□□ 1.28
NUP50-218ENST00000493456 RTL9Q8NET4 1388 aa23.05■■□□□ 1.28
NUP50-218ENST00000493456 ADM5C9JUS6 153 aa23.05■■□□□ 1.28
NUP50-218ENST00000493456 ZNF157P51786 506 aaPredicted RBP23.05■■□□□ 1.28
NUP50-218ENST00000493456 GPSM2P81274 684 aa23.05■■□□□ 1.28
NUP50-218ENST00000493456 HDGFL1Q5TGJ6 251 aa23.05■■□□□ 1.28
NUP50-218ENST00000493456 DLK2Q6UY11 383 aa23.05■■□□□ 1.28
NUP50-218ENST00000493456 KRT24Q2M2I5 525 aa23.04■■□□□ 1.28
NUP50-218ENST00000493456 KIF4BQ2VIQ3 1234 aa23.04■■□□□ 1.28
NUP50-218ENST00000493456 DBF4Q9UBU7 674 aaPredicted RBP23.04■■□□□ 1.28
NUP50-218ENST00000493456 KIF23Q02241 960 aaPredicted RBP23.03■■□□□ 1.28
NUP50-218ENST00000493456 SULF1Q8IWU6 871 aa23.03■■□□□ 1.28
NUP50-218ENST00000493456 TBC1D16Q8TBP0 767 aa23.03■■□□□ 1.28
NUP50-218ENST00000493456 ZNF428Q96B54 188 aa23.03■■□□□ 1.28
NUP50-218ENST00000493456 PCDH10Q9P2E7 1040 aa23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms