RNA–Protein interactions for RNA: ENST00000492878.1

EPHB4-209, Transcript of EPH receptor B4, humanhuman

TSL 5

Gene EPHB4, Length 769 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-209ENST00000492878 NUDCQ9Y266 331 aa20.25■□□□□ 0.83
EPHB4-209ENST00000492878 LAMB2P55268 1798 aa20.25■□□□□ 0.83
EPHB4-209ENST00000492878 ANKRD36CQ5JPF3 1778 aa20.25■□□□□ 0.83
EPHB4-209ENST00000492878 YDJCA8MPS7 323 aa20.24■□□□□ 0.83
EPHB4-209ENST00000492878 BBOX1O75936 387 aa20.24■□□□□ 0.83
EPHB4-209ENST00000492878 RAD17O75943 681 aa20.24■□□□□ 0.83
EPHB4-209ENST00000492878 EIF4A1P60842 406 aaKnown RBP20.24■□□□□ 0.83
EPHB4-209ENST00000492878 PRPF38BQ5VTL8 546 aaKnown RBP20.24■□□□□ 0.83
EPHB4-209ENST00000492878 DPP8Q6V1X1 898 aaPredicted RBP20.24■□□□□ 0.83
EPHB4-209ENST00000492878 PPP1R42Q7Z4L9 355 aa20.24■□□□□ 0.83
EPHB4-209ENST00000492878 USP48Q86UV5 1035 aa20.24■□□□□ 0.83
EPHB4-209ENST00000492878 BCL2L13Q9BXK5 485 aa20.24■□□□□ 0.83
EPHB4-209ENST00000492878 TMX4Q9H1E5 349 aaPredicted RBP20.24■□□□□ 0.83
EPHB4-209ENST00000492878 RRP7AQ9Y3A4 280 aaKnown RBP20.24■□□□□ 0.83
EPHB4-209ENST00000492878 U2AF1L5P0DN76 240 aaPredicted RBP20.23■□□□□ 0.83
EPHB4-209ENST00000492878 SOX10P56693 466 aa20.23■□□□□ 0.83
EPHB4-209ENST00000492878 U2AF1Q01081 240 aaKnown RBP eCLIP20.23■□□□□ 0.83
EPHB4-209ENST00000492878 RGMBQ6NW40 437 aa20.23■□□□□ 0.83
EPHB4-209ENST00000492878 DLK2Q6UY11 383 aa20.23■□□□□ 0.83
EPHB4-209ENST00000492878 LRP10Q7Z4F1 713 aa20.23■□□□□ 0.83
EPHB4-209ENST00000492878 PNISRQ8TF01 805 aaKnown RBP20.23■□□□□ 0.83
EPHB4-209ENST00000492878 ERBB4Q15303 1308 aa20.23■□□□□ 0.83
EPHB4-209ENST00000492878 LRRC37AA6NMS7 1700 aa20.22■□□□□ 0.83
EPHB4-209ENST00000492878 MPNDQ8N594 471 aa20.22■□□□□ 0.83
EPHB4-209ENST00000492878 DPF2Q92785 391 aa20.22■□□□□ 0.83
EPHB4-209ENST00000492878 CCDC102AQ96A19 550 aa20.22■□□□□ 0.83
EPHB4-209ENST00000492878 RNF186Q9NXI6 227 aa20.22■□□□□ 0.83
EPHB4-209ENST00000492878 MYL6BP14649 208 aa20.21■□□□□ 0.83
EPHB4-209ENST00000492878 KIF23Q02241 960 aaPredicted RBP20.21■□□□□ 0.83
EPHB4-209ENST00000492878 MICALL2Q8IY33 904 aa20.21■□□□□ 0.83
EPHB4-209ENST00000492878 DLG5Q8TDM6 1919 aa20.21■□□□□ 0.83
EPHB4-209ENST00000492878 H7C1D1 291 aa20.2■□□□□ 0.82
EPHB4-209ENST00000492878 UTP14AQ9BVJ6 771 aaKnown RBP20.2■□□□□ 0.82
EPHB4-209ENST00000492878 GBA2Q9HCG7 927 aaPredicted RBP20.2■□□□□ 0.82
EPHB4-209ENST00000492878 AKAP11Q9UKA4 1901 aa20.19■□□□□ 0.82
EPHB4-209ENST00000492878 POLR2AP24928 1970 aaKnown RBP20.19■□□□□ 0.82
EPHB4-209ENST00000492878 TRPA1O75762 1119 aa20.18■□□□□ 0.82
EPHB4-209ENST00000492878 EGFRP00533 1210 aa20.18■□□□□ 0.82
EPHB4-209ENST00000492878 CNGB1Q14028 1251 aaPredicted RBP20.18■□□□□ 0.82
EPHB4-209ENST00000492878 SAMD7Q7Z3H4 446 aa20.18■□□□□ 0.82
EPHB4-209ENST00000492878 KRT26Q7Z3Y9 468 aa20.18■□□□□ 0.82
EPHB4-209ENST00000492878 SLC10A3P09131 477 aa20.17■□□□□ 0.82
EPHB4-209ENST00000492878 PDIA6Q15084 440 aa20.17■□□□□ 0.82
EPHB4-209ENST00000492878 CTU1Q7Z7A3 348 aaKnown RBP20.17■□□□□ 0.82
EPHB4-209ENST00000492878 C2orf69Q8N8R5 385 aa20.17■□□□□ 0.82
EPHB4-209ENST00000492878 CSRNP1Q96S65 589 aa20.17■□□□□ 0.82
EPHB4-209ENST00000492878 ZBTB12Q9Y330 459 aaPredicted RBP20.17■□□□□ 0.82
EPHB4-209ENST00000492878 ZNF157P51786 506 aaPredicted RBP20.16■□□□□ 0.82
EPHB4-209ENST00000492878 GRAPQ13588 217 aa20.16■□□□□ 0.82
EPHB4-209ENST00000492878 TMC4Q7Z404 712 aa20.16■□□□□ 0.82
EPHB4-209ENST00000492878 GRAPLQ8TC17 118 aaPredicted RBP20.16■□□□□ 0.82
EPHB4-209ENST00000492878 TAF1P21675 1872 aa20.16■□□□□ 0.82
EPHB4-209ENST00000492878 ADM5C9JUS6 153 aa20.15■□□□□ 0.82
EPHB4-209ENST00000492878 PSMD14O00487 310 aa20.15■□□□□ 0.82
EPHB4-209ENST00000492878 PPP2R1AP30153 589 aa20.15■□□□□ 0.82
EPHB4-209ENST00000492878 RPS12P25398 132 aaKnown RBP20.14■□□□□ 0.81
EPHB4-209ENST00000492878 TBC1D10BQ4KMP7 808 aaPredicted RBP20.14■□□□□ 0.81
EPHB4-209ENST00000492878 HCLS1P14317 486 aaPredicted RBP20.13■□□□□ 0.81
EPHB4-209ENST00000492878 DDX46Q7L014 1031 aaKnown RBP20.13■□□□□ 0.81
EPHB4-209ENST00000492878 NLRP10Q86W26 655 aa20.13■□□□□ 0.81
EPHB4-209ENST00000492878 REM2Q8IYK8 340 aaPredicted RBP20.13■□□□□ 0.81
EPHB4-209ENST00000492878 RTL9Q8NET4 1388 aa20.12■□□□□ 0.81
EPHB4-209ENST00000492878 DCPSQ96C86 337 aaKnown RBP20.12■□□□□ 0.81
EPHB4-209ENST00000492878 THUMPD2Q9BTF0 503 aaKnown RBP20.12■□□□□ 0.81
EPHB4-209ENST00000492878 HPS5Q9UPZ3 1129 aa20.12■□□□□ 0.81
EPHB4-209ENST00000492878 DDX60Q8IY21 1712 aaKnown RBP20.12■□□□□ 0.81
EPHB4-209ENST00000492878 WASHC4Q2M389 1173 aa20.11■□□□□ 0.81
EPHB4-209ENST00000492878 PROSER3Q2NL68 480 aa20.11■□□□□ 0.81
EPHB4-209ENST00000492878 RASAL3Q86YV0 1011 aa20.1■□□□□ 0.81
EPHB4-209ENST00000492878 PLEKHF1Q96S99 279 aa20.1■□□□□ 0.81
EPHB4-209ENST00000492878 DBNDD1Q9H9R9 158 aa20.1■□□□□ 0.81
EPHB4-209ENST00000492878 SH3TC1Q8TE82 1336 aa20.09■□□□□ 0.81
EPHB4-209ENST00000492878 PKN2Q16513 984 aaKnown RBP20.09■□□□□ 0.81
EPHB4-209ENST00000492878 HSP90AB3PQ58FF7 597 aa20.09■□□□□ 0.81
EPHB4-209ENST00000492878 KCNQ5Q9NR82 932 aa20.09■□□□□ 0.81
EPHB4-209ENST00000492878 COL4A1P02462 1669 aa20.09■□□□□ 0.81
EPHB4-209ENST00000492878 ZNF609O15014 1411 aa20.09■□□□□ 0.81
EPHB4-209ENST00000492878 SCN9AQ15858 1988 aa20.08■□□□□ 0.81
EPHB4-209ENST00000492878 POLLQ9UGP5 575 aa20.08■□□□□ 0.81
EPHB4-209ENST00000492878 TRMT112Q9UI30 125 aaKnown RBP20.08■□□□□ 0.81
EPHB4-209ENST00000492878 ECE2O60344 883 aa20.07■□□□□ 0.8
EPHB4-209ENST00000492878 TCIRG1Q13488 830 aa20.07■□□□□ 0.8
EPHB4-209ENST00000492878 NFE2L2Q16236 605 aa20.07■□□□□ 0.8
EPHB4-209ENST00000492878 KIF4BQ2VIQ3 1234 aa20.07■□□□□ 0.8
EPHB4-209ENST00000492878 SULF1Q8IWU6 871 aa20.07■□□□□ 0.8
EPHB4-209ENST00000492878 CDCA5Q96FF9 252 aa20.07■□□□□ 0.8
EPHB4-209ENST00000492878 GGA3Q9NZ52 723 aa20.07■□□□□ 0.8
EPHB4-209ENST00000492878 ASTN2O75129 1339 aaPredicted RBP20.06■□□□□ 0.8
EPHB4-209ENST00000492878 PAPPA2Q9BXP8 1791 aa20.06■□□□□ 0.8
EPHB4-209ENST00000492878 ANXA1P04083 346 aa20.06■□□□□ 0.8
EPHB4-209ENST00000492878 VIL1P09327 827 aaKnown RBP20.06■□□□□ 0.8
EPHB4-209ENST00000492878 FKBP1BP68106 108 aa20.06■□□□□ 0.8
EPHB4-209ENST00000492878 RBM26Q5T8P6 1007 aaKnown RBP20.06■□□□□ 0.8
EPHB4-209ENST00000492878 HTTP42858 3142 aa20.05■□□□□ 0.8
EPHB4-209ENST00000492878 ZNF280AP59817 542 aaPredicted RBP20.05■□□□□ 0.8
EPHB4-209ENST00000492878 SF3B3Q15393 1217 aaKnown RBP20.05■□□□□ 0.8
EPHB4-209ENST00000492878 NOM1Q5C9Z4 860 aaKnown RBP20.05■□□□□ 0.8
EPHB4-209ENST00000492878 COPS6Q7L5N1 327 aa20.05■□□□□ 0.8
EPHB4-209ENST00000492878 CELF1Q92879 486 aaKnown RBP20.05■□□□□ 0.8
EPHB4-209ENST00000492878 NSFL1CQ9UNZ2 370 aaKnown RBP20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms