RNA–Protein interactions for RNA: ENST00000490993.5

NPHP3-208, Transcript of nephrocystin 3, humanhuman

TSL 5

Gene NPHP3, Length 5,197 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-208ENST00000490993 ATP5JP18859 108 aa8.66□□□□□ -1.02
NPHP3-208ENST00000490993 CCDC183Q5T5S1 534 aa8.66□□□□□ -1.02
NPHP3-208ENST00000490993 FBXO3Q9UK99 471 aa8.66□□□□□ -1.02
NPHP3-208ENST00000490993 ATP10DQ9P241 1426 aa8.66□□□□□ -1.02
NPHP3-208ENST00000490993 RNF113AO15541 343 aaKnown RBP8.66□□□□□ -1.02
NPHP3-208ENST00000490993 ZPR1O75312 459 aa8.66□□□□□ -1.02
NPHP3-208ENST00000490993 DZIP3Q86Y13 1208 aaKnown RBP8.66□□□□□ -1.02
NPHP3-208ENST00000490993 TM6SF1Q9BZW5 370 aa8.66□□□□□ -1.02
NPHP3-208ENST00000490993 DNAJC5Q9H3Z4 198 aa8.66□□□□□ -1.02
NPHP3-208ENST00000490993 COPRSQ9NQ92 184 aa8.66□□□□□ -1.02
NPHP3-208ENST00000490993 LRP2BPQ9P2M1 347 aa8.66□□□□□ -1.02
NPHP3-208ENST00000490993 USP16Q9Y5T5 823 aa8.66□□□□□ -1.02
NPHP3-208ENST00000490993 KINO60870 393 aaKnown RBP8.66□□□□□ -1.02
NPHP3-208ENST00000490993 ATP6V1AP38606 617 aa8.66□□□□□ -1.02
NPHP3-208ENST00000490993 DDX46Q7L014 1031 aaKnown RBP8.66□□□□□ -1.02
NPHP3-208ENST00000490993 TRIM22Q8IYM9 498 aa8.66□□□□□ -1.02
NPHP3-208ENST00000490993 AXIN2Q9Y2T1 843 aa8.66□□□□□ -1.02
NPHP3-208ENST00000490993 NRXN3Q9Y4C0 1643 aa8.65□□□□□ -1.02
NPHP3-208ENST00000490993 NGLY1Q96IV0 654 aa8.65□□□□□ -1.02
NPHP3-208ENST00000490993 UTP14AQ9BVJ6 771 aaKnown RBP8.65□□□□□ -1.02
NPHP3-208ENST00000490993 SETD1BQ9UPS6 1966 aaKnown RBP8.65□□□□□ -1.02
NPHP3-208ENST00000490993 AK2P54819 239 aa8.65□□□□□ -1.02
NPHP3-208ENST00000490993 PROSER3Q2NL68 480 aa8.65□□□□□ -1.02
NPHP3-208ENST00000490993 SNX14Q9Y5W7 946 aa8.65□□□□□ -1.02
NPHP3-208ENST00000490993 TDO2P48775 406 aa8.65□□□□□ -1.03
NPHP3-208ENST00000490993 TCIRG1Q13488 830 aa8.65□□□□□ -1.03
NPHP3-208ENST00000490993 STK38Q15208 465 aa8.65□□□□□ -1.03
NPHP3-208ENST00000490993 PARP10Q53GL7 1025 aa8.65□□□□□ -1.03
NPHP3-208ENST00000490993 HEG1Q9ULI3 1381 aa8.64□□□□□ -1.03
NPHP3-208ENST00000490993 IRS4O14654 1257 aaPredicted RBP8.64□□□□□ -1.03
NPHP3-208ENST00000490993 A1BGP04217 495 aa8.64□□□□□ -1.03
NPHP3-208ENST00000490993 FOSBP53539 338 aa8.64□□□□□ -1.03
NPHP3-208ENST00000490993 TICAM2Q86XR7 235 aa8.64□□□□□ -1.03
NPHP3-208ENST00000490993 TNMDQ9H2S6 317 aa8.64□□□□□ -1.03
NPHP3-208ENST00000490993 GPR108Q9NPR9 543 aa8.64□□□□□ -1.03
NPHP3-208ENST00000490993 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.64□□□□□ -1.03
NPHP3-208ENST00000490993 UBE2HP62256 183 aa8.64□□□□□ -1.03
NPHP3-208ENST00000490993 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.64□□□□□ -1.03
NPHP3-208ENST00000490993 NCOA7Q8NI08 942 aa8.64□□□□□ -1.03
NPHP3-208ENST00000490993 RNF41Q9H4P4 317 aaPredicted RBP8.64□□□□□ -1.03
NPHP3-208ENST00000490993 ZSCAN16Q9H4T2 348 aaPredicted RBP8.64□□□□□ -1.03
NPHP3-208ENST00000490993 RAI14Q9P0K7 980 aa8.64□□□□□ -1.03
NPHP3-208ENST00000490993 AKAP12Q02952 1782 aa8.64□□□□□ -1.03
NPHP3-208ENST00000490993 NUP62CLQ9H1M0 184 aa8.64□□□□□ -1.03
NPHP3-208ENST00000490993 NAPBQ9H115 298 aa8.64□□□□□ -1.03
NPHP3-208ENST00000490993 SDF4Q9BRK5 362 aa8.63□□□□□ -1.03
NPHP3-208ENST00000490993 ATG3Q9NT62 314 aa8.63□□□□□ -1.03
NPHP3-208ENST00000490993 RNF214Q8ND24 703 aa8.63□□□□□ -1.03
NPHP3-208ENST00000490993 ANTXR1Q9H6X2 564 aa8.63□□□□□ -1.03
NPHP3-208ENST00000490993 PLEKHG2Q9H7P9 1386 aa8.63□□□□□ -1.03
NPHP3-208ENST00000490993 SYCE3A1L190 88 aa8.63□□□□□ -1.03
NPHP3-208ENST00000490993 PDE8AO60658 829 aa8.63□□□□□ -1.03
NPHP3-208ENST00000490993 MCM5P33992 734 aa8.63□□□□□ -1.03
NPHP3-208ENST00000490993 VSIG10Q8N0Z9 540 aa8.63□□□□□ -1.03
NPHP3-208ENST00000490993 KBTBD3Q8NAB2 608 aa8.63□□□□□ -1.03
NPHP3-208ENST00000490993 UBAC1Q9BSL1 405 aa8.63□□□□□ -1.03
NPHP3-208ENST00000490993 CCDC196A0A1B0GTZ2 297 aa8.63□□□□□ -1.03
NPHP3-208ENST00000490993 CIAO1O76071 339 aa8.63□□□□□ -1.03
NPHP3-208ENST00000490993 F13A1P00488 732 aa8.63□□□□□ -1.03
NPHP3-208ENST00000490993 RRP12Q5JTH9 1297 aaKnown RBP8.63□□□□□ -1.03
NPHP3-208ENST00000490993 ZGPATQ8N5A5 531 aaKnown RBP8.63□□□□□ -1.03
NPHP3-208ENST00000490993 A0A1B0GUL7 405 aa8.62□□□□□ -1.03
NPHP3-208ENST00000490993 SLC27A2O14975 620 aa8.62□□□□□ -1.03
NPHP3-208ENST00000490993 DHX8Q14562 1220 aaKnown RBP8.62□□□□□ -1.03
NPHP3-208ENST00000490993 RASSF8Q8NHQ8 419 aa8.62□□□□□ -1.03
NPHP3-208ENST00000490993 EAF2Q96CJ1 260 aaPredicted RBP8.62□□□□□ -1.03
NPHP3-208ENST00000490993 DBNDD2Q9BQY9 259 aa8.62□□□□□ -1.03
NPHP3-208ENST00000490993 CYP27B1O15528 508 aa8.62□□□□□ -1.03
NPHP3-208ENST00000490993 PCCAP05165 728 aaPredicted RBP8.62□□□□□ -1.03
NPHP3-208ENST00000490993 MAP3K11Q16584 847 aa8.62□□□□□ -1.03
NPHP3-208ENST00000490993 DNAJC10Q8IXB1 793 aa8.62□□□□□ -1.03
NPHP3-208ENST00000490993 NYXQ9GZU5 481 aa8.62□□□□□ -1.03
NPHP3-208ENST00000490993 RPS6KB1P23443 525 aa8.62□□□□□ -1.03
NPHP3-208ENST00000490993 ZSCAN23Q3MJ62 389 aa8.62□□□□□ -1.03
NPHP3-208ENST00000490993 AEBP2Q6ZN18 517 aaPredicted RBP8.62□□□□□ -1.03
NPHP3-208ENST00000490993 SNRKQ9NRH2 765 aa8.62□□□□□ -1.03
NPHP3-208ENST00000490993 ME1P48163 572 aa8.62□□□□□ -1.03
NPHP3-208ENST00000490993 DDX11Q96FC9 970 aa8.62□□□□□ -1.03
NPHP3-208ENST00000490993 DDX19AQ9NUU7 478 aaKnown RBP8.62□□□□□ -1.03
NPHP3-208ENST00000490993 RGS12O14924 1447 aa8.61□□□□□ -1.03
NPHP3-208ENST00000490993 CTAGE5O15320 804 aa8.61□□□□□ -1.03
NPHP3-208ENST00000490993 UVSSAQ2YD98 709 aa8.61□□□□□ -1.03
NPHP3-208ENST00000490993 BICDL1Q6ZP65 573 aa8.61□□□□□ -1.03
NPHP3-208ENST00000490993 DHX32Q7L7V1 743 aaKnown RBP8.61□□□□□ -1.03
NPHP3-208ENST00000490993 KLHDC4Q8TBB5 520 aa8.61□□□□□ -1.03
NPHP3-208ENST00000490993 PRAMEF22A3QJZ6 481 aa8.61□□□□□ -1.03
NPHP3-208ENST00000490993 GNAT2P19087 354 aa8.61□□□□□ -1.03
NPHP3-208ENST00000490993 LRSAM1Q6UWE0 723 aa8.61□□□□□ -1.03
NPHP3-208ENST00000490993 Q6ZUG5 572 aa8.61□□□□□ -1.03
NPHP3-208ENST00000490993 ZBTB38Q8NAP3 1195 aaPredicted RBP8.61□□□□□ -1.03
NPHP3-208ENST00000490993 CCDC87Q9NVE4 849 aa8.61□□□□□ -1.03
NPHP3-208ENST00000490993 ADCY9O60503 1353 aa8.61□□□□□ -1.03
NPHP3-208ENST00000490993 KIF1AQ12756 1690 aa8.61□□□□□ -1.03
NPHP3-208ENST00000490993 ANKRD18AQ8IVF6 992 aa8.61□□□□□ -1.03
NPHP3-208ENST00000490993 C8orf76Q96K31 380 aa8.61□□□□□ -1.03
NPHP3-208ENST00000490993 HAUS7Q99871 368 aa8.61□□□□□ -1.03
NPHP3-208ENST00000490993 LSG1Q9H089 658 aaKnown RBP8.61□□□□□ -1.03
NPHP3-208ENST00000490993 CNNM2Q9H8M5 875 aa8.61□□□□□ -1.03
NPHP3-208ENST00000490993 NIP7Q9Y221 180 aaKnown RBP eCLIP8.61□□□□□ -1.03
NPHP3-208ENST00000490993 SH3TC1Q8TE82 1336 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms