RNA–Protein interactions for RNA: ENST00000490554.5

LMNB2-203, Transcript of lamin B2, humanhuman

TSL 2

Gene LMNB2, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB2-203ENST00000490554 MAP2K2P36507 400 aa20.34■□□□□ 0.85
LMNB2-203ENST00000490554 AIMP1Q12904 312 aaKnown RBP20.34■□□□□ 0.85
LMNB2-203ENST00000490554 TCIRG1Q13488 830 aa20.34■□□□□ 0.85
LMNB2-203ENST00000490554 SAPCD2Q86UD0 394 aa20.34■□□□□ 0.85
LMNB2-203ENST00000490554 GLIS2Q9BZE0 524 aaPredicted RBP20.34■□□□□ 0.85
LMNB2-203ENST00000490554 AOC2O75106 756 aa20.33■□□□□ 0.85
LMNB2-203ENST00000490554 RAD17O75943 681 aa20.33■□□□□ 0.85
LMNB2-203ENST00000490554 CELF2O95319 508 aaKnown RBP20.33■□□□□ 0.85
LMNB2-203ENST00000490554 HIRAP54198 1017 aaPredicted RBP20.33■□□□□ 0.85
LMNB2-203ENST00000490554 GRAPQ13588 217 aa20.33■□□□□ 0.85
LMNB2-203ENST00000490554 DDX46Q7L014 1031 aaKnown RBP20.33■□□□□ 0.85
LMNB2-203ENST00000490554 GRAPLQ8TC17 118 aaPredicted RBP20.33■□□□□ 0.85
LMNB2-203ENST00000490554 NECTIN2Q92692 538 aa20.33■□□□□ 0.85
LMNB2-203ENST00000490554 TRMT112Q9UI30 125 aaKnown RBP20.33■□□□□ 0.85
LMNB2-203ENST00000490554 TRPM7Q96QT4 1865 aa20.33■□□□□ 0.84
LMNB2-203ENST00000490554 SH3TC1Q8TE82 1336 aa20.32■□□□□ 0.84
LMNB2-203ENST00000490554 TMPOP42166 694 aaKnown RBP20.32■□□□□ 0.84
LMNB2-203ENST00000490554 LMOD3Q0VAK6 560 aa20.32■□□□□ 0.84
LMNB2-203ENST00000490554 TNIP1Q15025 636 aa20.32■□□□□ 0.84
LMNB2-203ENST00000490554 ZC3H15Q8WU90 426 aaKnown RBP20.32■□□□□ 0.84
LMNB2-203ENST00000490554 HHIPL1Q96JK4 782 aa20.32■□□□□ 0.84
LMNB2-203ENST00000490554 BCL2L13Q9BXK5 485 aa20.31■□□□□ 0.84
LMNB2-203ENST00000490554 YDJCA8MPS7 323 aa20.3■□□□□ 0.84
LMNB2-203ENST00000490554 TRPM4Q8TD43 1214 aa20.3■□□□□ 0.84
LMNB2-203ENST00000490554 CHL1O00533 1208 aa20.29■□□□□ 0.84
LMNB2-203ENST00000490554 CDC37L1Q7L3B6 337 aa20.29■□□□□ 0.84
LMNB2-203ENST00000490554 TMC4Q7Z404 712 aa20.29■□□□□ 0.84
LMNB2-203ENST00000490554 CNOT7Q9UIV1 285 aaKnown RBP20.29■□□□□ 0.84
LMNB2-203ENST00000490554 TSKSQ9UJT2 592 aa20.29■□□□□ 0.84
LMNB2-203ENST00000490554 ANKRD36CQ5JPF3 1778 aa20.29■□□□□ 0.84
LMNB2-203ENST00000490554 SHTN1A0MZ66 631 aa20.28■□□□□ 0.84
LMNB2-203ENST00000490554 KRT24Q2M2I5 525 aa20.28■□□□□ 0.84
LMNB2-203ENST00000490554 LAMB2P55268 1798 aa20.28■□□□□ 0.84
LMNB2-203ENST00000490554 DUOX1Q9NRD9 1551 aa20.27■□□□□ 0.84
LMNB2-203ENST00000490554 CA12O43570 354 aa20.27■□□□□ 0.84
LMNB2-203ENST00000490554 FAM161AQ3B820 660 aa20.27■□□□□ 0.84
LMNB2-203ENST00000490554 ZNF408Q9H9D4 720 aa20.27■□□□□ 0.84
LMNB2-203ENST00000490554 H7C1D1 291 aa20.26■□□□□ 0.83
LMNB2-203ENST00000490554 BRPF1P55201 1214 aaPredicted RBP20.26■□□□□ 0.83
LMNB2-203ENST00000490554 RALBP1Q15311 655 aa20.26■□□□□ 0.83
LMNB2-203ENST00000490554 MICALL2Q8IY33 904 aa20.26■□□□□ 0.83
LMNB2-203ENST00000490554 PLBD2Q8NHP8 589 aa20.26■□□□□ 0.83
LMNB2-203ENST00000490554 CHPF2Q9P2E5 772 aa20.26■□□□□ 0.83
LMNB2-203ENST00000490554 CCDC85CA6NKD9 419 aa20.25■□□□□ 0.83
LMNB2-203ENST00000490554 SF3B3Q15393 1217 aaKnown RBP20.25■□□□□ 0.83
LMNB2-203ENST00000490554 DPF2Q92785 391 aa20.25■□□□□ 0.83
LMNB2-203ENST00000490554 CELF1Q92879 486 aaKnown RBP20.25■□□□□ 0.83
LMNB2-203ENST00000490554 ZNF428Q96B54 188 aa20.25■□□□□ 0.83
LMNB2-203ENST00000490554 ISCA1Q9BUE6 129 aa20.25■□□□□ 0.83
LMNB2-203ENST00000490554 ZBTB12Q9Y330 459 aaPredicted RBP20.25■□□□□ 0.83
LMNB2-203ENST00000490554 PSMD14O00487 310 aa20.24■□□□□ 0.83
LMNB2-203ENST00000490554 NEUROD2Q15784 382 aa20.24■□□□□ 0.83
LMNB2-203ENST00000490554 WASHC4Q2M389 1173 aa20.24■□□□□ 0.83
LMNB2-203ENST00000490554 RGS19P49795 217 aa20.23■□□□□ 0.83
LMNB2-203ENST00000490554 HDGFL1Q5TGJ6 251 aa20.23■□□□□ 0.83
LMNB2-203ENST00000490554 ANKRD13DQ6ZTN6 518 aa20.23■□□□□ 0.83
LMNB2-203ENST00000490554 USP48Q86UV5 1035 aa20.23■□□□□ 0.83
LMNB2-203ENST00000490554 FAM89AQ96GI7 184 aa20.23■□□□□ 0.83
LMNB2-203ENST00000490554 NSFL1CQ9UNZ2 370 aaKnown RBP20.23■□□□□ 0.83
LMNB2-203ENST00000490554 TRIM35Q9UPQ4 493 aa20.23■□□□□ 0.83
LMNB2-203ENST00000490554 LRRC37AA6NMS7 1700 aa20.22■□□□□ 0.83
LMNB2-203ENST00000490554 HOXB7P09629 217 aa20.22■□□□□ 0.83
LMNB2-203ENST00000490554 SAMD7Q7Z3H4 446 aa20.22■□□□□ 0.83
LMNB2-203ENST00000490554 CCDC146Q8IYE0 955 aa20.22■□□□□ 0.83
LMNB2-203ENST00000490554 DBNDD1Q9H9R9 158 aa20.22■□□□□ 0.83
LMNB2-203ENST00000490554 POLLQ9UGP5 575 aa20.22■□□□□ 0.83
LMNB2-203ENST00000490554 LAS1LQ9Y4W2 734 aaKnown RBP20.22■□□□□ 0.83
LMNB2-203ENST00000490554 TAF1P21675 1872 aa20.22■□□□□ 0.83
LMNB2-203ENST00000490554 ATP5J2-PTCD1G3V325 749 aa20.21■□□□□ 0.83
LMNB2-203ENST00000490554 NOGQ13253 232 aa20.21■□□□□ 0.83
LMNB2-203ENST00000490554 DLK2Q6UY11 383 aa20.21■□□□□ 0.83
LMNB2-203ENST00000490554 ZIC5Q96T25 663 aa20.21■□□□□ 0.83
LMNB2-203ENST00000490554 DBF4Q9UBU7 674 aaPredicted RBP20.21■□□□□ 0.83
LMNB2-203ENST00000490554 RIMBP2O15034 1052 aa20.2■□□□□ 0.82
LMNB2-203ENST00000490554 EGFRP00533 1210 aa20.2■□□□□ 0.82
LMNB2-203ENST00000490554 RPS12P25398 132 aaKnown RBP20.2■□□□□ 0.82
LMNB2-203ENST00000490554 HUNKP57058 714 aa20.2■□□□□ 0.82
LMNB2-203ENST00000490554 GPSM2P81274 684 aa20.2■□□□□ 0.82
LMNB2-203ENST00000490554 TBC1D10BQ4KMP7 808 aaPredicted RBP20.2■□□□□ 0.82
LMNB2-203ENST00000490554 MCOLN1Q9GZU1 580 aa20.2■□□□□ 0.82
LMNB2-203ENST00000490554 C6orf229H3BNL8 230 aa20.19■□□□□ 0.82
LMNB2-203ENST00000490554 MLLT1Q03111 559 aaPredicted RBP20.19■□□□□ 0.82
LMNB2-203ENST00000490554 TRIM28Q13263 835 aaKnown RBP20.19■□□□□ 0.82
LMNB2-203ENST00000490554 KRT26Q7Z3Y9 468 aa20.19■□□□□ 0.82
LMNB2-203ENST00000490554 RUNDC1Q96C34 613 aa20.19■□□□□ 0.82
LMNB2-203ENST00000490554 KCNQ5Q9NR82 932 aa20.19■□□□□ 0.82
LMNB2-203ENST00000490554 RTL9Q8NET4 1388 aa20.19■□□□□ 0.82
LMNB2-203ENST00000490554 DDX60Q8IY21 1712 aaKnown RBP20.19■□□□□ 0.82
LMNB2-203ENST00000490554 ECE2O60344 883 aa20.18■□□□□ 0.82
LMNB2-203ENST00000490554 RTL5Q5HYW3 569 aaPredicted RBP20.18■□□□□ 0.82
LMNB2-203ENST00000490554 EYA3Q99504 573 aa20.18■□□□□ 0.82
LMNB2-203ENST00000490554 HYPKQ9NX55 129 aa20.18■□□□□ 0.82
LMNB2-203ENST00000490554 COL4A1P02462 1669 aa20.17■□□□□ 0.82
LMNB2-203ENST00000490554 IRS4O14654 1257 aaPredicted RBP20.17■□□□□ 0.82
LMNB2-203ENST00000490554 RPS8P62241 208 aaKnown RBP20.17■□□□□ 0.82
LMNB2-203ENST00000490554 DOK7Q18PE1 504 aa20.17■□□□□ 0.82
LMNB2-203ENST00000490554 TBC1D16Q8TBP0 767 aa20.17■□□□□ 0.82
LMNB2-203ENST00000490554 GBA2Q9HCG7 927 aaPredicted RBP20.17■□□□□ 0.82
LMNB2-203ENST00000490554 FAM155AB1AL88 458 aaPredicted RBP20.16■□□□□ 0.82
LMNB2-203ENST00000490554 SLC34A2O95436 690 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms