RNA–Protein interactions for RNA: ENST00000489049.5

PDCD4-209, Transcript of programmed cell death 4, humanhuman

TSL 2

Gene PDCD4, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-209ENST00000489049 ZNF521Q96K83 1311 aa8.66□□□□□ -1.02
PDCD4-209ENST00000489049 WASLO00401 505 aaPredicted RBP8.66□□□□□ -1.02
PDCD4-209ENST00000489049 ARHGEF15O94989 841 aa8.66□□□□□ -1.02
PDCD4-209ENST00000489049 RHOQP17081 205 aa8.66□□□□□ -1.02
PDCD4-209ENST00000489049 GPC1P35052 558 aa8.66□□□□□ -1.02
PDCD4-209ENST00000489049 ERVK-9P63128 1117 aa8.66□□□□□ -1.02
PDCD4-209ENST00000489049 CCDC27Q2M243 656 aa8.66□□□□□ -1.02
PDCD4-209ENST00000489049 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.66□□□□□ -1.02
PDCD4-209ENST00000489049 UBR1Q8IWV7 1749 aa8.66□□□□□ -1.02
PDCD4-209ENST00000489049 DIP2AQ14689 1571 aa8.65□□□□□ -1.02
PDCD4-209ENST00000489049 CPS1P31327 1500 aa8.65□□□□□ -1.02
PDCD4-209ENST00000489049 E9PSI1 815 aa8.65□□□□□ -1.02
PDCD4-209ENST00000489049 GDF11O95390 407 aa8.65□□□□□ -1.02
PDCD4-209ENST00000489049 ADAMTS2O95450 1211 aa8.65□□□□□ -1.02
PDCD4-209ENST00000489049 GAS6Q14393 721 aa8.65□□□□□ -1.02
PDCD4-209ENST00000489049 CC2D2BQ6DHV5 1058 aa8.65□□□□□ -1.02
PDCD4-209ENST00000489049 RUNDC1Q96C34 613 aa8.65□□□□□ -1.02
PDCD4-209ENST00000489049 SETD1AO15047 1707 aaKnown RBP8.65□□□□□ -1.03
PDCD4-209ENST00000489049 A0A1W2PP64 1363 aa8.64□□□□□ -1.03
PDCD4-209ENST00000489049 MEN1O00255 615 aa8.64□□□□□ -1.03
PDCD4-209ENST00000489049 SRSF11Q05519 484 aaKnown RBP8.64□□□□□ -1.03
PDCD4-209ENST00000489049 NR1H3Q13133 447 aa8.64□□□□□ -1.03
PDCD4-209ENST00000489049 RNF20Q5VTR2 975 aa8.64□□□□□ -1.03
PDCD4-209ENST00000489049 TXNDC2Q86VQ3 553 aa8.64□□□□□ -1.03
PDCD4-209ENST00000489049 WDR63Q8IWG1 891 aa8.64□□□□□ -1.03
PDCD4-209ENST00000489049 TRMT2AQ8IZ69 625 aaKnown RBP8.64□□□□□ -1.03
PDCD4-209ENST00000489049 EDC4Q6P2E9 1401 aaKnown RBP8.63□□□□□ -1.03
PDCD4-209ENST00000489049 NRXN3Q9Y4C0 1643 aa8.63□□□□□ -1.03
PDCD4-209ENST00000489049 A0A1W2PRU2 124 aa8.63□□□□□ -1.03
PDCD4-209ENST00000489049 MTHFSP49914 203 aa8.63□□□□□ -1.03
PDCD4-209ENST00000489049 RRP1P56182 461 aaKnown RBP8.63□□□□□ -1.03
PDCD4-209ENST00000489049 MCCD1P59942 119 aaPredicted RBP8.63□□□□□ -1.03
PDCD4-209ENST00000489049 AAMPQ13685 434 aa8.63□□□□□ -1.03
PDCD4-209ENST00000489049 ZNF837Q96EG3 531 aaPredicted RBP8.63□□□□□ -1.03
PDCD4-209ENST00000489049 GMCL1Q96IK5 515 aa8.63□□□□□ -1.03
PDCD4-209ENST00000489049 CPSF1Q10570 1443 aaKnown RBP8.63□□□□□ -1.03
PDCD4-209ENST00000489049 ADAMTS13Q76LX8 1427 aa8.63□□□□□ -1.03
PDCD4-209ENST00000489049 METP08581 1390 aa8.62□□□□□ -1.03
PDCD4-209ENST00000489049 ADGRB2O60241 1585 aa8.62□□□□□ -1.03
PDCD4-209ENST00000489049 FYB1O15117 783 aa8.62□□□□□ -1.03
PDCD4-209ENST00000489049 GPR37L1O60883 481 aa8.62□□□□□ -1.03
PDCD4-209ENST00000489049 CT47B1P0C2W7 299 aaPredicted RBP8.62□□□□□ -1.03
PDCD4-209ENST00000489049 SLFN5Q08AF3 891 aa8.62□□□□□ -1.03
PDCD4-209ENST00000489049 LYPD4Q6UWN0 246 aa8.62□□□□□ -1.03
PDCD4-209ENST00000489049 TRIM22Q8IYM9 498 aa8.62□□□□□ -1.03
PDCD4-209ENST00000489049 ZNF592Q92610 1267 aa8.62□□□□□ -1.03
PDCD4-209ENST00000489049 CABP1Q9NZU7 370 aa8.62□□□□□ -1.03
PDCD4-209ENST00000489049 PTCH1Q13635 1447 aa8.62□□□□□ -1.03
PDCD4-209ENST00000489049 AATKQ6ZMQ8 1374 aa8.61□□□□□ -1.03
PDCD4-209ENST00000489049 PNPLA6Q8IY17 1366 aa8.61□□□□□ -1.03
PDCD4-209ENST00000489049 CDC42BPGQ6DT37 1551 aa8.61□□□□□ -1.03
PDCD4-209ENST00000489049 ANKRD26Q9UPS8 1709 aa8.61□□□□□ -1.03
PDCD4-209ENST00000489049 SCTRP47872 440 aa8.61□□□□□ -1.03
PDCD4-209ENST00000489049 SAFB2Q14151 953 aaKnown RBP eCLIP8.61□□□□□ -1.03
PDCD4-209ENST00000489049 CYP2U1Q7Z449 544 aa8.61□□□□□ -1.03
PDCD4-209ENST00000489049 BANK1Q8NDB2 785 aa8.61□□□□□ -1.03
PDCD4-209ENST00000489049 DYRK1BQ9Y463 629 aa8.61□□□□□ -1.03
PDCD4-209ENST00000489049 CD163L1Q9NR16 1453 aa8.61□□□□□ -1.03
PDCD4-209ENST00000489049 FER1L4A9Z1Z3 1794 aa8.61□□□□□ -1.03
PDCD4-209ENST00000489049 IL16Q14005 1332 aa8.6□□□□□ -1.03
PDCD4-209ENST00000489049 C3P01024 1663 aa8.6□□□□□ -1.03
PDCD4-209ENST00000489049 APAF1O14727 1248 aa8.6□□□□□ -1.03
PDCD4-209ENST00000489049 NEFMP07197 916 aa8.6□□□□□ -1.03
PDCD4-209ENST00000489049 DUSP27Q5VZP5 1158 aa8.6□□□□□ -1.03
PDCD4-209ENST00000489049 WAPLQ7Z5K2 1190 aa8.6□□□□□ -1.03
PDCD4-209ENST00000489049 NUDT16Q96DE0 195 aaKnown RBP8.6□□□□□ -1.03
PDCD4-209ENST00000489049 NLRP3Q96P20 1036 aa8.6□□□□□ -1.03
PDCD4-209ENST00000489049 ZNF330Q9Y3S2 320 aaPredicted RBP8.6□□□□□ -1.03
PDCD4-209ENST00000489049 PCDHB11Q9Y5F2 797 aa8.6□□□□□ -1.03
PDCD4-209ENST00000489049 SETD1BQ9UPS6 1966 aaKnown RBP8.59□□□□□ -1.03
PDCD4-209ENST00000489049 GPR25O00155 361 aa8.59□□□□□ -1.03
PDCD4-209ENST00000489049 CELA2BP08218 269 aaPredicted RBP8.59□□□□□ -1.03
PDCD4-209ENST00000489049 IRS1P35568 1242 aa8.59□□□□□ -1.03
PDCD4-209ENST00000489049 MARSP56192 900 aaKnown RBP8.59□□□□□ -1.03
PDCD4-209ENST00000489049 MAP3K10Q02779 954 aa8.59□□□□□ -1.03
PDCD4-209ENST00000489049 CALD1Q05682 793 aaKnown RBP8.59□□□□□ -1.03
PDCD4-209ENST00000489049 POU4F2Q12837 409 aa8.59□□□□□ -1.03
PDCD4-209ENST00000489049 CLN3Q13286 438 aa8.59□□□□□ -1.03
PDCD4-209ENST00000489049 DBN1Q16643 649 aa8.59□□□□□ -1.03
PDCD4-209ENST00000489049 SLC27A3Q5K4L6 730 aa8.59□□□□□ -1.03
PDCD4-209ENST00000489049 RIPOR1Q6ZS17 1223 aa8.59□□□□□ -1.03
PDCD4-209ENST00000489049 MTMR14Q8NCE2 650 aa8.59□□□□□ -1.03
PDCD4-209ENST00000489049 CCDC136Q96JN2 1154 aa8.59□□□□□ -1.03
PDCD4-209ENST00000489049 GRIP2Q9C0E4 1043 aa8.59□□□□□ -1.03
PDCD4-209ENST00000489049 OSBPL3Q9H4L5 887 aa8.59□□□□□ -1.03
PDCD4-209ENST00000489049 MYH16Q9H6N6 1097 aa8.59□□□□□ -1.03
PDCD4-209ENST00000489049 MBIPQ9NS73 344 aa8.59□□□□□ -1.03
PDCD4-209ENST00000489049 NDUFB9Q9Y6M9 179 aa8.59□□□□□ -1.03
PDCD4-209ENST00000489049 PLEKHH1Q9ULM0 1364 aa8.59□□□□□ -1.03
PDCD4-209ENST00000489049 NKTRP30414 1462 aaKnown RBP8.58□□□□□ -1.04
PDCD4-209ENST00000489049 PPIP5K1Q6PFW1 1433 aa8.58□□□□□ -1.04
PDCD4-209ENST00000489049 ANKARQ7Z5J8 1434 aa8.58□□□□□ -1.04
PDCD4-209ENST00000489049 TRAK2O60296 914 aa8.58□□□□□ -1.04
PDCD4-209ENST00000489049 DIAPH1O60610 1272 aaKnown RBP8.58□□□□□ -1.04
PDCD4-209ENST00000489049 LTKP29376 864 aa8.58□□□□□ -1.04
PDCD4-209ENST00000489049 WWC1Q8IX03 1113 aa8.58□□□□□ -1.04
PDCD4-209ENST00000489049 TTC21AQ8NDW8 1320 aa8.57□□□□□ -1.04
PDCD4-209ENST00000489049 LOC100996750A0A140TA64 210 aa8.57□□□□□ -1.04
PDCD4-209ENST00000489049 SPATA31C2B4DYI2 1134 aa8.57□□□□□ -1.04
PDCD4-209ENST00000489049 U2AF1L5P0DN76 240 aaPredicted RBP8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms