RNA–Protein interactions for RNA: ENST00000488897.5

COL16A1-215, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL16A1, Length 2,423 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-215ENST00000488897 SRCIN1Q9C0H9 1055 aa22.32■■□□□ 1.16
COL16A1-215ENST00000488897 WWC3Q9ULE0 1092 aa22.32■■□□□ 1.16
COL16A1-215ENST00000488897 MMP10P09238 476 aa22.31■■□□□ 1.16
COL16A1-215ENST00000488897 NLRP10Q86W26 655 aa22.31■■□□□ 1.16
COL16A1-215ENST00000488897 ERVV-1B6SEH8 477 aa22.31■■□□□ 1.16
COL16A1-215ENST00000488897 ADRA2BP18089 450 aa22.31■■□□□ 1.16
COL16A1-215ENST00000488897 ZNF34Q8IZ26 560 aa22.31■■□□□ 1.16
COL16A1-215ENST00000488897 NEXNQ0ZGT2 675 aa22.3■■□□□ 1.16
COL16A1-215ENST00000488897 UBE3BQ7Z3V4 1068 aa22.3■■□□□ 1.16
COL16A1-215ENST00000488897 SETDB2Q96T68 719 aa22.3■■□□□ 1.16
COL16A1-215ENST00000488897 ISCA1Q9BUE6 129 aa22.3■■□□□ 1.16
COL16A1-215ENST00000488897 USP44Q9H0E7 712 aa22.3■■□□□ 1.16
COL16A1-215ENST00000488897 HMMRO75330 724 aa22.29■■□□□ 1.16
COL16A1-215ENST00000488897 HCLS1P14317 486 aaPredicted RBP22.29■■□□□ 1.16
COL16A1-215ENST00000488897 GCKRQ14397 625 aa22.29■■□□□ 1.16
COL16A1-215ENST00000488897 LINS1Q8NG48 757 aa22.29■■□□□ 1.16
COL16A1-215ENST00000488897 TRMT112Q9UI30 125 aaKnown RBP22.29■■□□□ 1.16
COL16A1-215ENST00000488897 SDSP20132 328 aa22.28■■□□□ 1.16
COL16A1-215ENST00000488897 NPHP1O15259 732 aa22.27■■□□□ 1.16
COL16A1-215ENST00000488897 ERFEQ4G0M1 354 aa22.27■■□□□ 1.16
COL16A1-215ENST00000488897 C9orf78Q9NZ63 289 aaPredicted RBP22.27■■□□□ 1.16
COL16A1-215ENST00000488897 TM4SF1P30408 202 aa22.27■■□□□ 1.16
COL16A1-215ENST00000488897 C3orf67Q6ZVT6 689 aa22.27■■□□□ 1.16
COL16A1-215ENST00000488897 NUCB2P80303 420 aa22.26■■□□□ 1.15
COL16A1-215ENST00000488897 EPHA10Q5JZY3 1008 aa22.26■■□□□ 1.15
COL16A1-215ENST00000488897 KLHL34Q8N239 644 aa22.26■■□□□ 1.15
COL16A1-215ENST00000488897 OTUD7AQ8TE49 926 aaPredicted RBP22.26■■□□□ 1.15
COL16A1-215ENST00000488897 CWC25Q9NXE8 425 aaPredicted RBP22.26■■□□□ 1.15
COL16A1-215ENST00000488897 PPP1R1BQ9UD71 204 aaPredicted RBP22.26■■□□□ 1.15
COL16A1-215ENST00000488897 ZNF652Q9Y2D9 606 aa22.26■■□□□ 1.15
COL16A1-215ENST00000488897 CCT4P50991 539 aaKnown RBP22.26■■□□□ 1.15
COL16A1-215ENST00000488897 SLC51AQ86UW1 340 aa22.26■■□□□ 1.15
COL16A1-215ENST00000488897 NBPF5PQ86XG9 351 aaPredicted RBP22.26■■□□□ 1.15
COL16A1-215ENST00000488897 FLAD1Q8NFF5 587 aa22.26■■□□□ 1.15
COL16A1-215ENST00000488897 CARMIL3Q8ND23 1372 aa22.25■■□□□ 1.15
COL16A1-215ENST00000488897 POLRMTO00411 1230 aaKnown RBP22.25■■□□□ 1.15
COL16A1-215ENST00000488897 REC8O95072 547 aa22.25■■□□□ 1.15
COL16A1-215ENST00000488897 SERPINB2P05120 415 aa22.25■■□□□ 1.15
COL16A1-215ENST00000488897 AFDNP55196 1824 aaKnown RBP22.25■■□□□ 1.15
COL16A1-215ENST00000488897 GTF2E1P29083 439 aaPredicted RBP22.25■■□□□ 1.15
COL16A1-215ENST00000488897 CLEC4GQ6UXB4 293 aa22.25■■□□□ 1.15
COL16A1-215ENST00000488897 BCORQ6W2J9 1755 aa22.24■■□□□ 1.15
COL16A1-215ENST00000488897 SMARCA5O60264 1052 aaPredicted RBP22.24■■□□□ 1.15
COL16A1-215ENST00000488897 CLCN1P35523 988 aa22.24■■□□□ 1.15
COL16A1-215ENST00000488897 SCN7AQ01118 1682 aa22.24■■□□□ 1.15
COL16A1-215ENST00000488897 BAG4O95429 457 aaKnown RBP22.23■■□□□ 1.15
COL16A1-215ENST00000488897 NTSR2O95665 410 aa22.23■■□□□ 1.15
COL16A1-215ENST00000488897 NLGN1Q8N2Q7 840 aa22.23■■□□□ 1.15
COL16A1-215ENST00000488897 KAZALD1Q96I82 304 aa22.23■■□□□ 1.15
COL16A1-215ENST00000488897 SUCLG2Q96I99 432 aa22.23■■□□□ 1.15
COL16A1-215ENST00000488897 CWC22Q9HCG8 908 aaKnown RBP22.23■■□□□ 1.15
COL16A1-215ENST00000488897 ST18O60284 1047 aa22.23■■□□□ 1.15
COL16A1-215ENST00000488897 OSBPL3Q9H4L5 887 aa22.23■■□□□ 1.15
COL16A1-215ENST00000488897 GRM8O00222 908 aa22.22■■□□□ 1.15
COL16A1-215ENST00000488897 LRRFIP2Q9Y608 721 aaKnown RBP22.22■■□□□ 1.15
COL16A1-215ENST00000488897 APBB1O00213 710 aa22.22■■□□□ 1.15
COL16A1-215ENST00000488897 KLHL40Q2TBA0 621 aa22.22■■□□□ 1.15
COL16A1-215ENST00000488897 GAS2L3Q86XJ1 694 aa22.22■■□□□ 1.15
COL16A1-215ENST00000488897 CCDC191Q8NCU4 936 aa22.22■■□□□ 1.15
COL16A1-215ENST00000488897 PRR5LQ6MZQ0 368 aa22.21■■□□□ 1.15
COL16A1-215ENST00000488897 UTP14AQ9BVJ6 771 aaKnown RBP22.21■■□□□ 1.15
COL16A1-215ENST00000488897 ABCC12Q96J65 1359 aa22.21■■□□□ 1.15
COL16A1-215ENST00000488897 ERC2O15083 957 aa22.2■■□□□ 1.14
COL16A1-215ENST00000488897 HSP90AB3PQ58FF7 597 aa22.2■■□□□ 1.14
COL16A1-215ENST00000488897 IBTKQ9P2D0 1353 aaPredicted RBP22.2■■□□□ 1.14
COL16A1-215ENST00000488897 CASP7P55210 303 aa22.19■■□□□ 1.14
COL16A1-215ENST00000488897 KLHDC4Q8TBB5 520 aa22.19■■□□□ 1.14
COL16A1-215ENST00000488897 PARP3Q9Y6F1 533 aa22.19■■□□□ 1.14
COL16A1-215ENST00000488897 DDX49Q9Y6V7 483 aaKnown RBP22.19■■□□□ 1.14
COL16A1-215ENST00000488897 H7C1W4 665 aa22.19■■□□□ 1.14
COL16A1-215ENST00000488897 IRS4O14654 1257 aaPredicted RBP22.19■■□□□ 1.14
COL16A1-215ENST00000488897 GNAI2P04899 355 aa22.19■■□□□ 1.14
COL16A1-215ENST00000488897 CNBD1Q8NA66 436 aa22.19■■□□□ 1.14
COL16A1-215ENST00000488897 CYP2E1P05181 493 aaPredicted RBP22.18■■□□□ 1.14
COL16A1-215ENST00000488897 UBTFL1P0CB47 393 aaPredicted RBP22.18■■□□□ 1.14
COL16A1-215ENST00000488897 ZBTB38Q8NAP3 1195 aaPredicted RBP22.18■■□□□ 1.14
COL16A1-215ENST00000488897 BICC1Q9H694 974 aaKnown RBP22.18■■□□□ 1.14
COL16A1-215ENST00000488897 CHMP3Q9Y3E7 222 aa22.18■■□□□ 1.14
COL16A1-215ENST00000488897 ALDH1L1O75891 902 aa22.18■■□□□ 1.14
COL16A1-215ENST00000488897 PDE1AP54750 535 aa22.18■■□□□ 1.14
COL16A1-215ENST00000488897 MTFR1LQ9H019 292 aa22.18■■□□□ 1.14
COL16A1-215ENST00000488897 PTGER2P43116 358 aa22.17■■□□□ 1.14
COL16A1-215ENST00000488897 TRIM28Q13263 835 aaKnown RBP22.17■■□□□ 1.14
COL16A1-215ENST00000488897 ANKRD36CQ5JPF3 1778 aa22.17■■□□□ 1.14
COL16A1-215ENST00000488897 TPTE2Q6XPS3 522 aa22.17■■□□□ 1.14
COL16A1-215ENST00000488897 PPP1R42Q7Z4L9 355 aa22.17■■□□□ 1.14
COL16A1-215ENST00000488897 TRIM44Q96DX7 344 aaPredicted RBP22.17■■□□□ 1.14
COL16A1-215ENST00000488897 CASZ1Q86V15 1759 aa22.16■■□□□ 1.14
COL16A1-215ENST00000488897 SH3TC1Q8TE82 1336 aa22.16■■□□□ 1.14
COL16A1-215ENST00000488897 PNMA6EA0A0J9YXQ4 647 aa22.15■■□□□ 1.14
COL16A1-215ENST00000488897 PCCAP05165 728 aaPredicted RBP22.15■■□□□ 1.14
COL16A1-215ENST00000488897 CHRNA5P30532 468 aa22.15■■□□□ 1.14
COL16A1-215ENST00000488897 PARP10Q53GL7 1025 aa22.15■■□□□ 1.14
COL16A1-215ENST00000488897 GNAI3P08754 354 aa22.15■■□□□ 1.14
COL16A1-215ENST00000488897 LMBR1LQ6UX01 489 aa22.15■■□□□ 1.14
COL16A1-215ENST00000488897 SEC31BQ9NQW1 1179 aa22.15■■□□□ 1.14
COL16A1-215ENST00000488897 TAF1P21675 1872 aa22.15■■□□□ 1.14
COL16A1-215ENST00000488897 ESPNB1AK53 854 aa22.14■■□□□ 1.13
COL16A1-215ENST00000488897 FOXO4P98177 505 aa22.14■■□□□ 1.13
COL16A1-215ENST00000488897 ZNF594Q96JF6 807 aaPredicted RBP22.14■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 153.3 ms