RNA–Protein interactions for RNA: ENST00000488426.5

NELFE-209, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 1,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-209ENST00000488426 MAP3K15Q6ZN16 1313 aa15.71■□□□□ 0.11
NELFE-209ENST00000488426 BMP2KLQ5H9B9 411 aa15.71■□□□□ 0.11
NELFE-209ENST00000488426 NPM2Q86SE8 214 aaKnown RBP15.71■□□□□ 0.11
NELFE-209ENST00000488426 KAZALD1Q96I82 304 aa15.71■□□□□ 0.11
NELFE-209ENST00000488426 SETDB2Q96T68 719 aa15.71■□□□□ 0.11
NELFE-209ENST00000488426 CWC25Q9NXE8 425 aaPredicted RBP15.71■□□□□ 0.11
NELFE-209ENST00000488426 ATP5J2-PTCD1G3V325 749 aa15.7■□□□□ 0.1
NELFE-209ENST00000488426 C2CD5Q86YS7 1000 aa15.7■□□□□ 0.1
NELFE-209ENST00000488426 BICC1Q9H694 974 aaKnown RBP15.7■□□□□ 0.1
NELFE-209ENST00000488426 FAM177BA6PVY3 158 aa15.69■□□□□ 0.1
NELFE-209ENST00000488426 TRIM28Q13263 835 aaKnown RBP15.69■□□□□ 0.1
NELFE-209ENST00000488426 TCIRG1Q13488 830 aa15.69■□□□□ 0.1
NELFE-209ENST00000488426 PLEKHM2Q8IWE5 1019 aa15.69■□□□□ 0.1
NELFE-209ENST00000488426 ISCA1Q9BUE6 129 aa15.69■□□□□ 0.1
NELFE-209ENST00000488426 NOP58Q9Y2X3 529 aaKnown RBP15.69■□□□□ 0.1
NELFE-209ENST00000488426 ANKRD31Q8N7Z5 1873 aa15.69■□□□□ 0.1
NELFE-209ENST00000488426 BCORQ6W2J9 1755 aa15.68■□□□□ 0.1
NELFE-209ENST00000488426 H7C1W4 665 aa15.68■□□□□ 0.1
NELFE-209ENST00000488426 APBB1O00213 710 aa15.68■□□□□ 0.1
NELFE-209ENST00000488426 SMARCA5O60264 1052 aaPredicted RBP15.68■□□□□ 0.1
NELFE-209ENST00000488426 SURF6O75683 361 aaKnown RBP15.68■□□□□ 0.1
NELFE-209ENST00000488426 PRELPP51888 382 aa15.68■□□□□ 0.1
NELFE-209ENST00000488426 CASP7P55210 303 aa15.68■□□□□ 0.1
NELFE-209ENST00000488426 HSP90AB3PQ58FF7 597 aa15.68■□□□□ 0.1
NELFE-209ENST00000488426 CLEC4GQ6UXB4 293 aa15.68■□□□□ 0.1
NELFE-209ENST00000488426 GIGYF2Q6Y7W6 1299 aaKnown RBP15.68■□□□□ 0.1
NELFE-209ENST00000488426 UBE3BQ7Z3V4 1068 aa15.68■□□□□ 0.1
NELFE-209ENST00000488426 NUP98P52948 1817 aa15.68■□□□□ 0.1
NELFE-209ENST00000488426 ERVV-1B6SEH8 477 aa15.67■□□□□ 0.1
NELFE-209ENST00000488426 RABL6Q3YEC7 729 aaPredicted RBP15.67■□□□□ 0.1
NELFE-209ENST00000488426 NIP7Q9Y221 180 aaKnown RBP eCLIP15.67■□□□□ 0.1
NELFE-209ENST00000488426 CEP350Q5VT06 3117 aa15.67■□□□□ 0.1
NELFE-209ENST00000488426 H0YIN7 160 aa15.67■□□□□ 0.1
NELFE-209ENST00000488426 KIF1BPQ96EK5 621 aa15.67■□□□□ 0.1
NELFE-209ENST00000488426 BRIP1Q9BX63 1249 aa15.67■□□□□ 0.1
NELFE-209ENST00000488426 ARFGEF1Q9Y6D6 1849 aa15.66■□□□□ 0.1
NELFE-209ENST00000488426 ERC1Q8IUD2 1116 aa15.66■□□□□ 0.1
NELFE-209ENST00000488426 CNBD1Q8NA66 436 aa15.66■□□□□ 0.1
NELFE-209ENST00000488426 ZNF622Q969S3 477 aaKnown RBP eCLIP15.66■□□□□ 0.15e-7■□□□□ 9.9
NELFE-209ENST00000488426 OSBPL3Q9H4L5 887 aa15.66■□□□□ 0.1
NELFE-209ENST00000488426 ZNF219Q9P2Y4 722 aaPredicted RBP15.66■□□□□ 0.1
NELFE-209ENST00000488426 RASSF7Q02833 373 aa15.65■□□□□ 0.1
NELFE-209ENST00000488426 TTC22Q5TAA0 569 aa15.65■□□□□ 0.1
NELFE-209ENST00000488426 C9orf131Q5VYM1 1079 aa15.65■□□□□ 0.1
NELFE-209ENST00000488426 NBPF5PQ86XG9 351 aaPredicted RBP15.65■□□□□ 0.1
NELFE-209ENST00000488426 C16orf71Q8IYS4 520 aaPredicted RBP15.65■□□□□ 0.1
NELFE-209ENST00000488426 TTLL6Q8N841 843 aa15.65■□□□□ 0.1
NELFE-209ENST00000488426 SALL3Q9BXA9 1300 aa15.65■□□□□ 0.1
NELFE-209ENST00000488426 ANP32AP39687 249 aaKnown RBP15.65■□□□□ 0.1
NELFE-209ENST00000488426 EPHA10Q5JZY3 1008 aa15.65■□□□□ 0.1
NELFE-209ENST00000488426 RHPN1Q8TCX5 695 aa15.65■□□□□ 0.1
NELFE-209ENST00000488426 GPTP24298 496 aa15.64■□□□□ 0.09
NELFE-209ENST00000488426 OTUD7AQ8TE49 926 aaPredicted RBP15.64■□□□□ 0.09
NELFE-209ENST00000488426 COL11A2P13942 1736 aaPredicted RBP15.64■□□□□ 0.09
NELFE-209ENST00000488426 SRGNP10124 158 aa15.63■□□□□ 0.09
NELFE-209ENST00000488426 PDE6BP35913 854 aa15.63■□□□□ 0.09
NELFE-209ENST00000488426 PDE1AP54750 535 aa15.63■□□□□ 0.09
NELFE-209ENST00000488426 C1QTNF8P60827 252 aa15.63■□□□□ 0.09
NELFE-209ENST00000488426 OS9Q13438 667 aaPredicted RBP15.63■□□□□ 0.09
NELFE-209ENST00000488426 NUTM1Q86Y26 1132 aa15.63■□□□□ 0.09
NELFE-209ENST00000488426 GPBP1L1Q9HC44 474 aaPredicted RBP15.63■□□□□ 0.09
NELFE-209ENST00000488426 ZNF652Q9Y2D9 606 aa15.63■□□□□ 0.09
NELFE-209ENST00000488426 AOX1Q06278 1338 aa15.63■□□□□ 0.09
NELFE-209ENST00000488426 UBN2Q6ZU65 1347 aa15.63■□□□□ 0.09
NELFE-209ENST00000488426 NPHP1O15259 732 aa15.63■□□□□ 0.09
NELFE-209ENST00000488426 PCCAP05165 728 aaPredicted RBP15.63■□□□□ 0.09
NELFE-209ENST00000488426 STAP2Q9UGK3 403 aa15.63■□□□□ 0.09
NELFE-209ENST00000488426 DLEC1Q9Y238 1755 aa15.62■□□□□ 0.09
NELFE-209ENST00000488426 C21orf2O43822 256 aa15.62■□□□□ 0.09
NELFE-209ENST00000488426 GSPT1P15170 499 aaKnown RBP15.62■□□□□ 0.09
NELFE-209ENST00000488426 MX1P20591 662 aa15.62■□□□□ 0.09
NELFE-209ENST00000488426 FOXO4P98177 505 aa15.62■□□□□ 0.09
NELFE-209ENST00000488426 COPRSQ9NQ92 184 aa15.62■□□□□ 0.09
NELFE-209ENST00000488426 SBF1O95248 1867 aa15.62■□□□□ 0.09
NELFE-209ENST00000488426 NFKBIEO00221 500 aa15.61■□□□□ 0.09
NELFE-209ENST00000488426 ST5P78524 1137 aa15.61■□□□□ 0.09
NELFE-209ENST00000488426 G3BP1Q13283 466 aaKnown RBP eCLIP15.61■□□□□ 0.098e-8■■■□□ 18.4
NELFE-209ENST00000488426 SUSD4Q5VX71 490 aa15.61■□□□□ 0.09
NELFE-209ENST00000488426 TPTE2Q6XPS3 522 aa15.61■□□□□ 0.09
NELFE-209ENST00000488426 NLRP10Q86W26 655 aa15.61■□□□□ 0.09
NELFE-209ENST00000488426 ZBTB38Q8NAP3 1195 aaPredicted RBP15.61■□□□□ 0.09
NELFE-209ENST00000488426 JARID2Q92833 1246 aaPredicted RBP15.61■□□□□ 0.09
NELFE-209ENST00000488426 UPF2Q9HAU5 1272 aaKnown RBP15.61■□□□□ 0.09
NELFE-209ENST00000488426 SLX4Q8IY92 1834 aa15.61■□□□□ 0.09
NELFE-209ENST00000488426 RFX5P48382 616 aaPredicted RBP15.61■□□□□ 0.09
NELFE-209ENST00000488426 OLFM4Q6UX06 510 aa15.61■□□□□ 0.09
NELFE-209ENST00000488426 SLC51AQ86UW1 340 aa15.61■□□□□ 0.09
NELFE-209ENST00000488426 ZNF34Q8IZ26 560 aa15.61■□□□□ 0.09
NELFE-209ENST00000488426 PLA2G12BQ9BX93 195 aa15.61■□□□□ 0.09
NELFE-209ENST00000488426 CDHR2Q9BYE9 1310 aa15.61■□□□□ 0.09
NELFE-209ENST00000488426 RNF181Q9P0P0 153 aa15.61■□□□□ 0.09
NELFE-209ENST00000488426 PA2G4Q9UQ80 394 aaKnown RBP15.61■□□□□ 0.09
NELFE-209ENST00000488426 ABCC12Q96J65 1359 aa15.6■□□□□ 0.09
NELFE-209ENST00000488426 RGL2O15211 777 aa15.6■□□□□ 0.09
NELFE-209ENST00000488426 EIF5BO60841 1220 aaKnown RBP15.6■□□□□ 0.09
NELFE-209ENST00000488426 ERFEQ4G0M1 354 aa15.6■□□□□ 0.09
NELFE-209ENST00000488426 LMBR1LQ6UX01 489 aa15.6■□□□□ 0.09
NELFE-209ENST00000488426 CLASRPQ8N2M8 674 aaKnown RBP15.6■□□□□ 0.09
NELFE-209ENST00000488426 IL1RAPL2Q9NP60 686 aa15.6■□□□□ 0.09
NELFE-209ENST00000488426 MYH3P11055 1940 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 159.2 ms