RNA–Protein interactions for RNA: ENST00000487222.5

EPHB4-206, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 5,058 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-206ENST00000487222 SKILP12757 684 aa16.9■□□□□ 0.3
EPHB4-206ENST00000487222 ISM2Q6H9L7 571 aa16.9■□□□□ 0.3
EPHB4-206ENST00000487222 CCDC186Q7Z3E2 898 aa16.9■□□□□ 0.3
EPHB4-206ENST00000487222 SLF2Q8IX21 1173 aa16.9■□□□□ 0.3
EPHB4-206ENST00000487222 MRPS27Q92552 414 aaKnown RBP16.9■□□□□ 0.3
EPHB4-206ENST00000487222 CCDC113Q9H0I3 377 aa16.9■□□□□ 0.3
EPHB4-206ENST00000487222 UQCRFS1P1P0C7P4 283 aa16.9■□□□□ 0.3
EPHB4-206ENST00000487222 CCDC96Q2M329 555 aa16.9■□□□□ 0.3
EPHB4-206ENST00000487222 TCOF1Q13428 1488 aaKnown RBP16.9■□□□□ 0.3
EPHB4-206ENST00000487222 DNA2P51530 1060 aa16.9■□□□□ 0.3
EPHB4-206ENST00000487222 UBASH3AP57075 661 aa16.9■□□□□ 0.3
EPHB4-206ENST00000487222 MICALCLQ6ZW33 695 aa16.9■□□□□ 0.3
EPHB4-206ENST00000487222 EHBP1Q8NDI1 1231 aa16.9■□□□□ 0.3
EPHB4-206ENST00000487222 DACT1Q9NYF0 836 aa16.9■□□□□ 0.3
EPHB4-206ENST00000487222 N4BP3O15049 544 aa16.89■□□□□ 0.29
EPHB4-206ENST00000487222 BMP15O95972 392 aa16.89■□□□□ 0.29
EPHB4-206ENST00000487222 IDEP14735 1019 aa16.89■□□□□ 0.29
EPHB4-206ENST00000487222 HS1BP3Q53T59 392 aa16.89■□□□□ 0.29
EPHB4-206ENST00000487222 GTF2F1P35269 517 aaKnown RBP eCLIP16.89■□□□□ 0.29
EPHB4-206ENST00000487222 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.89■□□□□ 0.29
EPHB4-206ENST00000487222 PPIP5K1Q6PFW1 1433 aa16.89■□□□□ 0.29
EPHB4-206ENST00000487222 TRAPPC8Q9Y2L5 1435 aa16.89■□□□□ 0.29
EPHB4-206ENST00000487222 PPFIA3O75145 1194 aa16.89■□□□□ 0.29
EPHB4-206ENST00000487222 PDE4BQ07343 736 aa16.89■□□□□ 0.29
EPHB4-206ENST00000487222 CCDC40Q4G0X9 1142 aa16.89■□□□□ 0.29
EPHB4-206ENST00000487222 TESK2Q96S53 571 aa16.89■□□□□ 0.29
EPHB4-206ENST00000487222 CDC5LQ99459 802 aaKnown RBP16.89■□□□□ 0.29
EPHB4-206ENST00000487222 CHPF2Q9P2E5 772 aa16.89■□□□□ 0.29
EPHB4-206ENST00000487222 ZNF830Q96NB3 372 aaPredicted RBP16.88■□□□□ 0.29
EPHB4-206ENST00000487222 LDHCP07864 332 aa16.88■□□□□ 0.29
EPHB4-206ENST00000487222 RAB11FIP4Q86YS3 637 aa16.88■□□□□ 0.29
EPHB4-206ENST00000487222 TCEANC2Q96MN5 208 aa16.88■□□□□ 0.29
EPHB4-206ENST00000487222 RLBP1P12271 317 aa16.88■□□□□ 0.29
EPHB4-206ENST00000487222 MCMDC2Q4G0Z9 681 aa16.88■□□□□ 0.29
EPHB4-206ENST00000487222 SPECC1Q5M775 1068 aa16.88■□□□□ 0.29
EPHB4-206ENST00000487222 CUL5Q93034 780 aa16.88■□□□□ 0.29
EPHB4-206ENST00000487222 HLTFQ14527 1009 aaKnown RBP eCLIP16.88■□□□□ 0.29
EPHB4-206ENST00000487222 C16orf71Q8IYS4 520 aaPredicted RBP16.88■□□□□ 0.29
EPHB4-206ENST00000487222 ZBTB40Q9NUA8 1239 aa16.88■□□□□ 0.29
EPHB4-206ENST00000487222 RMND1Q9NWS8 449 aa16.88■□□□□ 0.29
EPHB4-206ENST00000487222 GSTTP1A0A1W2PQM5 241 aa16.87■□□□□ 0.29
EPHB4-206ENST00000487222 TSPY2A6NKD2 308 aa16.87■□□□□ 0.29
EPHB4-206ENST00000487222 ZBTB43O43298 467 aa16.87■□□□□ 0.29
EPHB4-206ENST00000487222 PRIM1P49642 420 aaKnown RBP16.87■□□□□ 0.29
EPHB4-206ENST00000487222 DNM1Q05193 864 aaKnown RBP16.87■□□□□ 0.29
EPHB4-206ENST00000487222 WDR7Q9Y4E6 1490 aa16.87■□□□□ 0.29
EPHB4-206ENST00000487222 TUBB4AP04350 444 aa16.87■□□□□ 0.29
EPHB4-206ENST00000487222 NBPF7P0C2Y1 421 aaPredicted RBP16.87■□□□□ 0.29
EPHB4-206ENST00000487222 CETN1Q12798 172 aa16.87■□□□□ 0.29
EPHB4-206ENST00000487222 CTR9Q6PD62 1173 aa16.87■□□□□ 0.29
EPHB4-206ENST00000487222 CCDC91Q7Z6B0 441 aa16.87■□□□□ 0.29
EPHB4-206ENST00000487222 RIMS2Q9UQ26 1411 aa16.87■□□□□ 0.29
EPHB4-206ENST00000487222 TEX14Q8IWB6 1497 aa16.87■□□□□ 0.29
EPHB4-206ENST00000487222 GCOM1H8Y6P7 765 aaPredicted RBP16.87■□□□□ 0.29
EPHB4-206ENST00000487222 MYZAPP0CAP1 466 aa16.87■□□□□ 0.29
EPHB4-206ENST00000487222 TMTC2Q8N394 836 aa16.87■□□□□ 0.29
EPHB4-206ENST00000487222 ALG1Q9BT22 464 aa16.87■□□□□ 0.29
EPHB4-206ENST00000487222 KAT14Q9H8E8 782 aa16.87■□□□□ 0.29
EPHB4-206ENST00000487222 GRM8O00222 908 aa16.87■□□□□ 0.29
EPHB4-206ENST00000487222 VAMP4O75379 141 aa16.87■□□□□ 0.29
EPHB4-206ENST00000487222 SPAG1Q07617 926 aa16.87■□□□□ 0.29
EPHB4-206ENST00000487222 CHRNA2Q15822 529 aa16.87■□□□□ 0.29
EPHB4-206ENST00000487222 KRT222Q8N1A0 295 aa16.87■□□□□ 0.29
EPHB4-206ENST00000487222 INTS4Q96HW7 963 aaKnown RBP16.87■□□□□ 0.29
EPHB4-206ENST00000487222 CTAGE1Q96RT6 745 aa16.87■□□□□ 0.29
EPHB4-206ENST00000487222 POLKQ9UBT6 870 aa16.87■□□□□ 0.29
EPHB4-206ENST00000487222 UNC13AQ9UPW8 1703 aa16.86■□□□□ 0.29
EPHB4-206ENST00000487222 TTC41PQ6P2S7 1318 aa16.86■□□□□ 0.29
EPHB4-206ENST00000487222 PIK3C2GO75747 1445 aa16.86■□□□□ 0.29
EPHB4-206ENST00000487222 SPDYE4A6NLX3 237 aa16.86■□□□□ 0.29
EPHB4-206ENST00000487222 LRRC27Q9C0I9 530 aa16.86■□□□□ 0.29
EPHB4-206ENST00000487222 SMC1AQ14683 1233 aaKnown RBP16.86■□□□□ 0.29
EPHB4-206ENST00000487222 WTAPQ15007 396 aa16.86■□□□□ 0.29
EPHB4-206ENST00000487222 KSR2Q6VAB6 950 aa16.86■□□□□ 0.29
EPHB4-206ENST00000487222 KRT23Q9C075 422 aa16.86■□□□□ 0.29
EPHB4-206ENST00000487222 TAOK3Q9H2K8 898 aa16.86■□□□□ 0.29
EPHB4-206ENST00000487222 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.86■□□□□ 0.296e-6■□□□□ 9.8
EPHB4-206ENST00000487222 LRRC2Q9BYS8 371 aa16.86■□□□□ 0.29
EPHB4-206ENST00000487222 TNNQ9UQP3 1299 aa16.86■□□□□ 0.29
EPHB4-206ENST00000487222 CEP85Q6P2H3 762 aa16.85■□□□□ 0.29
EPHB4-206ENST00000487222 GOPCQ9HD26 462 aa16.85■□□□□ 0.29
EPHB4-206ENST00000487222 EIF4A2Q14240 407 aaKnown RBP16.85■□□□□ 0.29
EPHB4-206ENST00000487222 Q6ZUG5 572 aa16.85■□□□□ 0.29
EPHB4-206ENST00000487222 NGLY1Q96IV0 654 aa16.85■□□□□ 0.29
EPHB4-206ENST00000487222 TRIM47Q96LD4 638 aa16.85■□□□□ 0.29
EPHB4-206ENST00000487222 DNAJC25Q9H1X3 360 aa16.85■□□□□ 0.29
EPHB4-206ENST00000487222 JADE2Q9NQC1 790 aa16.85■□□□□ 0.29
EPHB4-206ENST00000487222 NPHP3Q7Z494 1330 aa16.85■□□□□ 0.29
EPHB4-206ENST00000487222 TMCO5BA8MYB1 307 aa16.85■□□□□ 0.29
EPHB4-206ENST00000487222 BAG3O95817 575 aa16.85■□□□□ 0.29
EPHB4-206ENST00000487222 DHX37Q8IY37 1157 aaKnown RBP16.85■□□□□ 0.29
EPHB4-206ENST00000487222 GIMAP7Q8NHV1 300 aa16.85■□□□□ 0.29
EPHB4-206ENST00000487222 ZSWIM4Q9H7M6 989 aa16.85■□□□□ 0.29
EPHB4-206ENST00000487222 ABCC10Q5T3U5 1492 aa16.84■□□□□ 0.29
EPHB4-206ENST00000487222 AKR1B10O60218 316 aa16.84■□□□□ 0.29
EPHB4-206ENST00000487222 TCERG1LQ5VWI1 586 aa16.84■□□□□ 0.29
EPHB4-206ENST00000487222 CNNM2Q9H8M5 875 aa16.84■□□□□ 0.29
EPHB4-206ENST00000487222 XAGE3Q8WTP9 111 aa16.84■□□□□ 0.29
EPHB4-206ENST00000487222 BCCIPQ9P287 314 aaKnown RBP eCLIP16.84■□□□□ 0.29
EPHB4-206ENST00000487222 DNAI1Q9UI46 699 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 189.4 ms