RNA–Protein interactions for RNA: ENST00000486901.1

HSPG2-211, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 3,586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-211ENST00000486901 POLR3DP05423 398 aaPredicted RBP14.59□□□□□ -0.07
HSPG2-211ENST00000486901 HSP90AB3PQ58FF7 597 aa14.59□□□□□ -0.07
HSPG2-211ENST00000486901 GTF3C6Q969F1 213 aa14.59□□□□□ -0.07
HSPG2-211ENST00000486901 PPP6R1Q9UPN7 881 aa14.59□□□□□ -0.07
HSPG2-211ENST00000486901 MAP3K5Q99683 1374 aa14.58□□□□□ -0.07
HSPG2-211ENST00000486901 ATP5J2-PTCD1G3V325 749 aa14.58□□□□□ -0.07
HSPG2-211ENST00000486901 PTCD1O75127 700 aaKnown RBP14.58□□□□□ -0.07
HSPG2-211ENST00000486901 GOLPH3LQ9H4A5 285 aa14.58□□□□□ -0.07
HSPG2-211ENST00000486901 USP6P35125 1406 aa14.58□□□□□ -0.08
HSPG2-211ENST00000486901 A0A1B0GVL5 298 aa14.58□□□□□ -0.08
HSPG2-211ENST00000486901 SMC2O95347 1197 aa14.58□□□□□ -0.08
HSPG2-211ENST00000486901 RPS6KB1P23443 525 aa14.58□□□□□ -0.08
HSPG2-211ENST00000486901 PTPN14Q15678 1187 aa14.58□□□□□ -0.08
HSPG2-211ENST00000486901 NEUROD6Q96NK8 337 aa14.58□□□□□ -0.08
HSPG2-211ENST00000486901 CLSTN2Q9H4D0 955 aa14.58□□□□□ -0.08
HSPG2-211ENST00000486901 NEO1Q92859 1461 aa14.58□□□□□ -0.08
HSPG2-211ENST00000486901 EPHA10Q5JZY3 1008 aa14.58□□□□□ -0.08
HSPG2-211ENST00000486901 RIC3Q7Z5B4 369 aa14.58□□□□□ -0.08
HSPG2-211ENST00000486901 MAP4K1Q92918 833 aa14.58□□□□□ -0.08
HSPG2-211ENST00000486901 CTNNA3Q9UI47 895 aa14.58□□□□□ -0.08
HSPG2-211ENST00000486901 KMT5BQ4FZB7 885 aa14.57□□□□□ -0.08
HSPG2-211ENST00000486901 SDF4Q9BRK5 362 aa14.57□□□□□ -0.08
HSPG2-211ENST00000486901 SCAND2PQ9GZW5 306 aaPredicted RBP14.57□□□□□ -0.08
HSPG2-211ENST00000486901 EPC1Q9H2F5 836 aa14.57□□□□□ -0.08
HSPG2-211ENST00000486901 ZFP91Q96JP5 570 aaPredicted RBP14.57□□□□□ -0.08
HSPG2-211ENST00000486901 PREX1Q8TCU6 1659 aa14.57□□□□□ -0.08
HSPG2-211ENST00000486901 PSMA5P28066 241 aa14.57□□□□□ -0.08
HSPG2-211ENST00000486901 CCDC85AQ96PX6 553 aaPredicted RBP14.57□□□□□ -0.08
HSPG2-211ENST00000486901 USP28Q96RU2 1077 aa14.57□□□□□ -0.08
HSPG2-211ENST00000486901 HAND2P61296 217 aa14.56□□□□□ -0.08
HSPG2-211ENST00000486901 HSP90AB4PQ58FF6 505 aa14.56□□□□□ -0.08
HSPG2-211ENST00000486901 LRRC8AQ8IWT6 810 aa14.56□□□□□ -0.08
HSPG2-211ENST00000486901 NPHP3Q7Z494 1330 aa14.56□□□□□ -0.08
HSPG2-211ENST00000486901 SMTNL1A8MU46 457 aa14.56□□□□□ -0.08
HSPG2-211ENST00000486901 KAZALD1Q96I82 304 aa14.56□□□□□ -0.08
HSPG2-211ENST00000486901 ADCY9O60503 1353 aa14.56□□□□□ -0.08
HSPG2-211ENST00000486901 PLEKHG3A1L390 1219 aa14.55□□□□□ -0.08
HSPG2-211ENST00000486901 CTIFO43310 598 aaKnown RBP14.55□□□□□ -0.08
HSPG2-211ENST00000486901 PDCP20941 246 aa14.55□□□□□ -0.08
HSPG2-211ENST00000486901 ERCC6LQ2NKX8 1250 aa14.55□□□□□ -0.08
HSPG2-211ENST00000486901 SBNO1A3KN83 1393 aa14.55□□□□□ -0.08
HSPG2-211ENST00000486901 SCRN1Q12765 414 aa14.55□□□□□ -0.08
HSPG2-211ENST00000486901 RNF20Q5VTR2 975 aa14.55□□□□□ -0.08
HSPG2-211ENST00000486901 FBXO38Q6PIJ6 1188 aa14.55□□□□□ -0.08
HSPG2-211ENST00000486901 PLA2G4DQ86XP0 818 aa14.55□□□□□ -0.08
HSPG2-211ENST00000486901 FSIP1Q8NA03 581 aa14.55□□□□□ -0.08
HSPG2-211ENST00000486901 NEK1Q96PY6 1258 aa14.55□□□□□ -0.08
HSPG2-211ENST00000486901 OVOS2A0A0J9YW53 1432 aa14.55□□□□□ -0.08
HSPG2-211ENST00000486901 OVOS2Q6IE36 1432 aa14.55□□□□□ -0.08
HSPG2-211ENST00000486901 AOX1Q06278 1338 aa14.55□□□□□ -0.08
HSPG2-211ENST00000486901 HDGFP51858 240 aaKnown RBP14.55□□□□□ -0.08
HSPG2-211ENST00000486901 MYD88Q99836 296 aa14.55□□□□□ -0.08
HSPG2-211ENST00000486901 GTPBP4Q9BZE4 634 aaKnown RBP14.55□□□□□ -0.08
HSPG2-211ENST00000486901 PEAK1Q9H792 1746 aa14.55□□□□□ -0.08
HSPG2-211ENST00000486901 ARHGEF10O15013 1369 aa14.54□□□□□ -0.08
HSPG2-211ENST00000486901 UTP14CQ5TAP6 766 aaKnown RBP14.54□□□□□ -0.08
HSPG2-211ENST00000486901 SYT10Q6XYQ8 523 aa14.54□□□□□ -0.08
HSPG2-211ENST00000486901 DDX19AQ9NUU7 478 aaKnown RBP14.54□□□□□ -0.08
HSPG2-211ENST00000486901 TTC41PQ6P2S7 1318 aa14.54□□□□□ -0.08
HSPG2-211ENST00000486901 POLR3GO15318 223 aaPredicted RBP14.54□□□□□ -0.08
HSPG2-211ENST00000486901 TFCP2Q12800 502 aa14.54□□□□□ -0.08
HSPG2-211ENST00000486901 DBNDD2Q9BQY9 259 aa14.54□□□□□ -0.08
HSPG2-211ENST00000486901 CLTCQ00610 1675 aaKnown RBP14.54□□□□□ -0.08
HSPG2-211ENST00000486901 KINO60870 393 aaKnown RBP14.54□□□□□ -0.08
HSPG2-211ENST00000486901 CYP21A2P08686 494 aa14.54□□□□□ -0.08
HSPG2-211ENST00000486901 TMC6Q7Z403 805 aa14.54□□□□□ -0.08
HSPG2-211ENST00000486901 HOMER1Q86YM7 354 aa14.54□□□□□ -0.08
HSPG2-211ENST00000486901 GRM8O00222 908 aa14.53□□□□□ -0.08
HSPG2-211ENST00000486901 TPM3P06753 285 aa14.53□□□□□ -0.08
HSPG2-211ENST00000486901 TTLL5Q6EMB2 1281 aa14.53□□□□□ -0.08
HSPG2-211ENST00000486901 CCDC73Q6ZRK6 1079 aa14.53□□□□□ -0.08
HSPG2-211ENST00000486901 BBXQ8WY36 941 aaPredicted RBP14.53□□□□□ -0.08
HSPG2-211ENST00000486901 OGFRQ9NZT2 677 aa14.53□□□□□ -0.08
HSPG2-211ENST00000486901 CSB-PGBD3P0DP91 1061 aa14.53□□□□□ -0.08
HSPG2-211ENST00000486901 SNRKQ9NRH2 765 aa14.53□□□□□ -0.08
HSPG2-211ENST00000486901 TAF5LO75529 589 aa14.53□□□□□ -0.08
HSPG2-211ENST00000486901 LMOD1P29536 600 aaPredicted RBP14.53□□□□□ -0.08
HSPG2-211ENST00000486901 SF3A1Q15459 793 aaKnown RBP14.53□□□□□ -0.08
HSPG2-211ENST00000486901 TTC21AQ8NDW8 1320 aa14.52□□□□□ -0.08
HSPG2-211ENST00000486901 ZRSR1Q15695 479 aaKnown RBP14.52□□□□□ -0.08
HSPG2-211ENST00000486901 ESCO1Q5FWF5 840 aa14.52□□□□□ -0.08
HSPG2-211ENST00000486901 UBE3BQ7Z3V4 1068 aa14.52□□□□□ -0.08
HSPG2-211ENST00000486901 TDRD7Q8NHU6 1098 aaKnown RBP14.52□□□□□ -0.08
HSPG2-211ENST00000486901 KIF18AQ8NI77 898 aa14.52□□□□□ -0.08
HSPG2-211ENST00000486901 DBF4Q9UBU7 674 aaPredicted RBP14.52□□□□□ -0.08
HSPG2-211ENST00000486901 GOLIM4O00461 696 aa14.52□□□□□ -0.09
HSPG2-211ENST00000486901 RESTQ13127 1097 aa14.52□□□□□ -0.09
HSPG2-211ENST00000486901 STOX1Q6ZVD7 989 aa14.52□□□□□ -0.09
HSPG2-211ENST00000486901 DBNLQ9UJU6 430 aaKnown RBP14.52□□□□□ -0.09
HSPG2-211ENST00000486901 PTPDC1A2A3K4 754 aa14.52□□□□□ -0.09
HSPG2-211ENST00000486901 TIMM10P62072 90 aa14.52□□□□□ -0.09
HSPG2-211ENST00000486901 IFNKQ9P0W0 207 aa14.52□□□□□ -0.09
HSPG2-211ENST00000486901 RXRAP19793 462 aa14.51□□□□□ -0.09
HSPG2-211ENST00000486901 IQCB1Q15051 598 aa14.51□□□□□ -0.09
HSPG2-211ENST00000486901 TM6SF1Q9BZW5 370 aa14.51□□□□□ -0.09
HSPG2-211ENST00000486901 COL15A1P39059 1388 aa14.51□□□□□ -0.09
HSPG2-211ENST00000486901 MARCKSP29966 332 aaPredicted RBP14.51□□□□□ -0.09
HSPG2-211ENST00000486901 DPCR1Q3MIW9 517 aa14.51□□□□□ -0.09
HSPG2-211ENST00000486901 C1orf141Q5JVX7 400 aa14.51□□□□□ -0.09
HSPG2-211ENST00000486901 KSR2Q6VAB6 950 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 185.5 ms