RNA–Protein interactions for RNA: ENST00000486519.5

U2AF1-211, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 3

Gene U2AF1, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-211ENST00000486519 SNRPA1P09661 255 aaKnown RBP20.58■□□□□ 0.89
U2AF1-211ENST00000486519 PKN2Q16513 984 aaKnown RBP20.58■□□□□ 0.89
U2AF1-211ENST00000486519 NYXQ9GZU5 481 aa20.58■□□□□ 0.89
U2AF1-211ENST00000486519 DIAPH1O60610 1272 aaKnown RBP20.57■□□□□ 0.88
U2AF1-211ENST00000486519 KIAA2012Q0VF49 1180 aa20.57■□□□□ 0.88
U2AF1-211ENST00000486519 TTLL7Q6ZT98 887 aa20.57■□□□□ 0.88
U2AF1-211ENST00000486519 RBBP6Q7Z6E9 1792 aaKnown RBP20.57■□□□□ 0.88
U2AF1-211ENST00000486519 ABCC4O15439 1325 aa20.56■□□□□ 0.88
U2AF1-211ENST00000486519 H7C1D1 291 aa20.56■□□□□ 0.88
U2AF1-211ENST00000486519 NTSR2O95665 410 aa20.56■□□□□ 0.88
U2AF1-211ENST00000486519 TNIP1Q15025 636 aa20.56■□□□□ 0.88
U2AF1-211ENST00000486519 RBM26Q5T8P6 1007 aaKnown RBP20.56■□□□□ 0.88
U2AF1-211ENST00000486519 FBXO46Q6PJ61 603 aaPredicted RBP20.56■□□□□ 0.88
U2AF1-211ENST00000486519 VPS33BQ9H267 617 aa20.56■□□□□ 0.88
U2AF1-211ENST00000486519 R3HDMLQ9H3Y0 253 aa20.56■□□□□ 0.88
U2AF1-211ENST00000486519 AMER1Q5JTC6 1135 aaPredicted RBP20.55■□□□□ 0.88
U2AF1-211ENST00000486519 GAS2L2Q8NHY3 880 aa20.55■□□□□ 0.88
U2AF1-211ENST00000486519 PHACTR3Q96KR7 559 aa20.55■□□□□ 0.88
U2AF1-211ENST00000486519 PSMD14O00487 310 aa20.54■□□□□ 0.88
U2AF1-211ENST00000486519 DPP8Q6V1X1 898 aaPredicted RBP20.54■□□□□ 0.88
U2AF1-211ENST00000486519 MOB2Q70IA6 237 aa20.54■□□□□ 0.88
U2AF1-211ENST00000486519 KCNQ5Q9NR82 932 aa20.54■□□□□ 0.88
U2AF1-211ENST00000486519 COLQQ9Y215 455 aaPredicted RBP20.54■□□□□ 0.88
U2AF1-211ENST00000486519 SCN9AQ15858 1988 aa20.54■□□□□ 0.88
U2AF1-211ENST00000486519 CDCA5Q96FF9 252 aa20.53■□□□□ 0.88
U2AF1-211ENST00000486519 IBTKQ9P2D0 1353 aaPredicted RBP20.53■□□□□ 0.88
U2AF1-211ENST00000486519 ANKRD36CQ5JPF3 1778 aa20.53■□□□□ 0.88
U2AF1-211ENST00000486519 LRRC37AA6NMS7 1700 aa20.53■□□□□ 0.88
U2AF1-211ENST00000486519 MAP3K15Q6ZN16 1313 aa20.53■□□□□ 0.88
U2AF1-211ENST00000486519 COL4A1P02462 1669 aa20.52■□□□□ 0.88
U2AF1-211ENST00000486519 GPR25O00155 361 aa20.52■□□□□ 0.88
U2AF1-211ENST00000486519 MPNDQ8N594 471 aa20.52■□□□□ 0.88
U2AF1-211ENST00000486519 SUPT20HQ8NEM7 779 aa20.52■□□□□ 0.88
U2AF1-211ENST00000486519 ZBTB3Q9H5J0 574 aa20.52■□□□□ 0.88
U2AF1-211ENST00000486519 DLL1O00548 723 aa20.51■□□□□ 0.87
U2AF1-211ENST00000486519 MCM10Q7L590 875 aa20.51■□□□□ 0.87
U2AF1-211ENST00000486519 DCPSQ96C86 337 aaKnown RBP20.51■□□□□ 0.87
U2AF1-211ENST00000486519 GGA3Q9NZ52 723 aa20.51■□□□□ 0.87
U2AF1-211ENST00000486519 SCAF8Q9UPN6 1271 aaKnown RBP20.51■□□□□ 0.87
U2AF1-211ENST00000486519 U2SURPO15042 1029 aaKnown RBP20.5■□□□□ 0.87
U2AF1-211ENST00000486519 ZNF34Q8IZ26 560 aa20.5■□□□□ 0.87
U2AF1-211ENST00000486519 DPF2Q92785 391 aa20.5■□□□□ 0.87
U2AF1-211ENST00000486519 DBNDD1Q9H9R9 158 aa20.5■□□□□ 0.87
U2AF1-211ENST00000486519 RTL9Q8NET4 1388 aa20.49■□□□□ 0.87
U2AF1-211ENST00000486519 ERVV-1B6SEH8 477 aa20.49■□□□□ 0.87
U2AF1-211ENST00000486519 DCTN1Q14203 1278 aa20.49■□□□□ 0.87
U2AF1-211ENST00000486519 KNSTRNQ9Y448 316 aa20.49■□□□□ 0.87
U2AF1-211ENST00000486519 KIAA0100Q14667 2235 aaKnown RBP20.49■□□□□ 0.87
U2AF1-211ENST00000486519 SP8Q8IXZ3 490 aa20.48■□□□□ 0.87
U2AF1-211ENST00000486519 MIS18AQ9NYP9 233 aa20.48■□□□□ 0.87
U2AF1-211ENST00000486519 TRIOBPQ9H2D6 2365 aa20.48■□□□□ 0.87
U2AF1-211ENST00000486519 MKRN3Q13064 507 aaKnown RBP20.47■□□□□ 0.87
U2AF1-211ENST00000486519 KIF4BQ2VIQ3 1234 aa20.47■□□□□ 0.87
U2AF1-211ENST00000486519 EN2P19622 333 aaPredicted RBP20.46■□□□□ 0.87
U2AF1-211ENST00000486519 NLRP3Q96P20 1036 aa20.46■□□□□ 0.87
U2AF1-211ENST00000486519 KDM3BQ7LBC6 1761 aa20.46■□□□□ 0.87
U2AF1-211ENST00000486519 DDX60Q8IY21 1712 aaKnown RBP20.45■□□□□ 0.86
U2AF1-211ENST00000486519 UBE2Q2LH0YL09 131 aa20.45■□□□□ 0.86
U2AF1-211ENST00000486519 SULF1Q8IWU6 871 aa20.45■□□□□ 0.86
U2AF1-211ENST00000486519 REM2Q8IYK8 340 aaPredicted RBP20.45■□□□□ 0.86
U2AF1-211ENST00000486519 TMX4Q9H1E5 349 aaPredicted RBP20.45■□□□□ 0.86
U2AF1-211ENST00000486519 RRP7AQ9Y3A4 280 aaKnown RBP20.45■□□□□ 0.86
U2AF1-211ENST00000486519 HSPA5P11021 654 aaKnown RBP20.44■□□□□ 0.86
U2AF1-211ENST00000486519 MYL6BP14649 208 aa20.44■□□□□ 0.86
U2AF1-211ENST00000486519 PRKAR2BP31323 418 aa20.44■□□□□ 0.86
U2AF1-211ENST00000486519 RIMBP2O15034 1052 aa20.43■□□□□ 0.86
U2AF1-211ENST00000486519 FKTNO75072 461 aa20.43■□□□□ 0.86
U2AF1-211ENST00000486519 PRAMEF18Q5VWM3 479 aa20.43■□□□□ 0.86
U2AF1-211ENST00000486519 HCLS1P14317 486 aaPredicted RBP20.42■□□□□ 0.86
U2AF1-211ENST00000486519 TM4SF4P48230 202 aa20.42■□□□□ 0.86
U2AF1-211ENST00000486519 DOK7Q18PE1 504 aa20.42■□□□□ 0.86
U2AF1-211ENST00000486519 NOM1Q5C9Z4 860 aaKnown RBP20.42■□□□□ 0.86
U2AF1-211ENST00000486519 SLC10A5Q5PT55 438 aa20.42■□□□□ 0.86
U2AF1-211ENST00000486519 ANGEL2Q5VTE6 544 aaKnown RBP20.42■□□□□ 0.86
U2AF1-211ENST00000486519 KIF6Q6ZMV9 814 aa20.42■□□□□ 0.86
U2AF1-211ENST00000486519 BBOX1O75936 387 aa20.41■□□□□ 0.86
U2AF1-211ENST00000486519 CC2D1BQ5T0F9 858 aaKnown RBP20.41■□□□□ 0.86
U2AF1-211ENST00000486519 RSPH6AQ9H0K4 717 aa20.41■□□□□ 0.86
U2AF1-211ENST00000486519 COL6A3P12111 3177 aa20.4■□□□□ 0.86
U2AF1-211ENST00000486519 GIGYF2Q6Y7W6 1299 aaKnown RBP20.4■□□□□ 0.86
U2AF1-211ENST00000486519 ZNF428Q96B54 188 aa20.4■□□□□ 0.86
U2AF1-211ENST00000486519 OTUD5Q96G74 571 aa20.4■□□□□ 0.86
U2AF1-211ENST00000486519 TRIM17Q9Y577 477 aa20.4■□□□□ 0.86
U2AF1-211ENST00000486519 ECE2O60344 883 aa20.39■□□□□ 0.85
U2AF1-211ENST00000486519 CAP1Q01518 475 aa20.39■□□□□ 0.85
U2AF1-211ENST00000486519 GRAPQ13588 217 aa20.39■□□□□ 0.85
U2AF1-211ENST00000486519 OTOP1Q7RTM1 612 aa20.39■□□□□ 0.85
U2AF1-211ENST00000486519 PPP1R42Q7Z4L9 355 aa20.39■□□□□ 0.85
U2AF1-211ENST00000486519 GRAPLQ8TC17 118 aaPredicted RBP20.39■□□□□ 0.85
U2AF1-211ENST00000486519 POLLQ9UGP5 575 aa20.39■□□□□ 0.85
U2AF1-211ENST00000486519 PSME4Q14997 1843 aa20.39■□□□□ 0.85
U2AF1-211ENST00000486519 RPS12P25398 132 aaKnown RBP20.38■□□□□ 0.85
U2AF1-211ENST00000486519 SCARF1Q14162 830 aa20.38■□□□□ 0.85
U2AF1-211ENST00000486519 WASHC4Q2M389 1173 aa20.38■□□□□ 0.85
U2AF1-211ENST00000486519 UTP14AQ9BVJ6 771 aaKnown RBP20.38■□□□□ 0.85
U2AF1-211ENST00000486519 CEP290O15078 2479 aa20.37■□□□□ 0.85
U2AF1-211ENST00000486519 DLG5Q8TDM6 1919 aa20.37■□□□□ 0.85
U2AF1-211ENST00000486519 SLC17A8Q8NDX2 589 aa20.37■□□□□ 0.85
U2AF1-211ENST00000486519 THUMPD2Q9BTF0 503 aaKnown RBP20.37■□□□□ 0.85
U2AF1-211ENST00000486519 H0YGN5 161 aa20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms