RNA–Protein interactions for RNA: ENST00000486461.1

PDZD11-204, Transcript of PDZ domain containing 11, humanhuman

TSL 3

Gene PDZD11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD11-204ENST00000486461 SREBF2Q12772 1141 aa8.15□□□□□ -1.1
PDZD11-204ENST00000486461 SLC51AQ86UW1 340 aa8.15□□□□□ -1.1
PDZD11-204ENST00000486461 FMNL2Q96PY5 1086 aa8.15□□□□□ -1.1
PDZD11-204ENST00000486461 NYXQ9GZU5 481 aa8.15□□□□□ -1.1
PDZD11-204ENST00000486461 R3HDMLQ9H3Y0 253 aa8.15□□□□□ -1.1
PDZD11-204ENST00000486461 PTPN22Q9Y2R2 807 aa8.15□□□□□ -1.1
PDZD11-204ENST00000486461 ZBTB12Q9Y330 459 aaPredicted RBP8.15□□□□□ -1.1
PDZD11-204ENST00000486461 RIC1Q4ADV7 1423 aa8.14□□□□□ -1.11
PDZD11-204ENST00000486461 ABCC12Q96J65 1359 aa8.14□□□□□ -1.11
PDZD11-204ENST00000486461 EGFRP00533 1210 aa8.14□□□□□ -1.11
PDZD11-204ENST00000486461 KIAA2012Q0VF49 1180 aa8.14□□□□□ -1.11
PDZD11-204ENST00000486461 DPP8Q6V1X1 898 aaPredicted RBP8.14□□□□□ -1.11
PDZD11-204ENST00000486461 NUTM1Q86Y26 1132 aa8.14□□□□□ -1.11
PDZD11-204ENST00000486461 RTFDC1Q9BY42 306 aaPredicted RBP8.14□□□□□ -1.11
PDZD11-204ENST00000486461 GGA3Q9NZ52 723 aa8.14□□□□□ -1.11
PDZD11-204ENST00000486461 ATP6V0A2Q9Y487 856 aa8.14□□□□□ -1.11
PDZD11-204ENST00000486461 YDJCA8MPS7 323 aa8.13□□□□□ -1.11
PDZD11-204ENST00000486461 ALDH1A1P00352 501 aa8.13□□□□□ -1.11
PDZD11-204ENST00000486461 TEFQ10587 303 aa8.13□□□□□ -1.11
PDZD11-204ENST00000486461 MKRN3Q13064 507 aaKnown RBP8.13□□□□□ -1.11
PDZD11-204ENST00000486461 KIF4BQ2VIQ3 1234 aa8.13□□□□□ -1.11
PDZD11-204ENST00000486461 SLC4A8Q2Y0W8 1093 aa8.13□□□□□ -1.11
PDZD11-204ENST00000486461 DPF3Q92784 378 aa8.13□□□□□ -1.11
PDZD11-204ENST00000486461 UBE2Q2LH0YL09 131 aa8.12□□□□□ -1.11
PDZD11-204ENST00000486461 PSMD14O00487 310 aa8.12□□□□□ -1.11
PDZD11-204ENST00000486461 RPS12P25398 132 aaKnown RBP8.12□□□□□ -1.11
PDZD11-204ENST00000486461 HLFQ16534 295 aa8.12□□□□□ -1.11
PDZD11-204ENST00000486461 MTHFSDQ2M296 383 aaKnown RBP8.12□□□□□ -1.11
PDZD11-204ENST00000486461 ANKRD13DQ6ZTN6 518 aa8.12□□□□□ -1.11
PDZD11-204ENST00000486461 MOB2Q70IA6 237 aa8.12□□□□□ -1.11
PDZD11-204ENST00000486461 MPNDQ8N594 471 aa8.12□□□□□ -1.11
PDZD11-204ENST00000486461 ERO1AQ96HE7 468 aa8.12□□□□□ -1.11
PDZD11-204ENST00000486461 USP16Q9Y5T5 823 aa8.12□□□□□ -1.11
PDZD11-204ENST00000486461 HTTP42858 3142 aa8.11□□□□□ -1.11
PDZD11-204ENST00000486461 A0A1W2PPC1 479 aa8.11□□□□□ -1.11
PDZD11-204ENST00000486461 TTLL12Q14166 644 aaPredicted RBP8.11□□□□□ -1.11
PDZD11-204ENST00000486461 NBPF11Q86T75 865 aa8.11□□□□□ -1.11
PDZD11-204ENST00000486461 LRCH3Q96II8 777 aa8.11□□□□□ -1.11
PDZD11-204ENST00000486461 ZNF333Q96JL9 665 aa8.11□□□□□ -1.11
PDZD11-204ENST00000486461 PRO3102Q9H379 93 aa8.11□□□□□ -1.11
PDZD11-204ENST00000486461 EFCC1Q9HA90 598 aa8.11□□□□□ -1.11
PDZD11-204ENST00000486461 PRDM6Q9NQX0 595 aa8.11□□□□□ -1.11
PDZD11-204ENST00000486461 STXBP5LQ9Y2K9 1186 aa8.11□□□□□ -1.11
PDZD11-204ENST00000486461 CENPFP49454 3210 aa8.11□□□□□ -1.11
PDZD11-204ENST00000486461 ASTN2O75129 1339 aaPredicted RBP8.1□□□□□ -1.11
PDZD11-204ENST00000486461 SOX1O00570 391 aaPredicted RBP8.1□□□□□ -1.11
PDZD11-204ENST00000486461 IL13P35225 146 aa8.1□□□□□ -1.11
PDZD11-204ENST00000486461 TCIRG1Q13488 830 aa8.1□□□□□ -1.11
PDZD11-204ENST00000486461 ANGEL2Q5VTE6 544 aaKnown RBP8.1□□□□□ -1.11
PDZD11-204ENST00000486461 SP8Q8IXZ3 490 aa8.1□□□□□ -1.11
PDZD11-204ENST00000486461 CD99L2Q8TCZ2 262 aa8.1□□□□□ -1.11
PDZD11-204ENST00000486461 BRCA2P51587 3418 aa8.09□□□□□ -1.11
PDZD11-204ENST00000486461 RANBP2P49792 3224 aaKnown RBP8.09□□□□□ -1.11
PDZD11-204ENST00000486461 BBOX1O75936 387 aa8.09□□□□□ -1.11
PDZD11-204ENST00000486461 HMOX1P09601 288 aa8.09□□□□□ -1.11
PDZD11-204ENST00000486461 SLC9C1Q4G0N8 1177 aa8.09□□□□□ -1.11
PDZD11-204ENST00000486461 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.09□□□□□ -1.11
PDZD11-204ENST00000486461 DEFB123Q8N688 67 aa8.09□□□□□ -1.11
PDZD11-204ENST00000486461 NLRP3Q96P20 1036 aa8.09□□□□□ -1.11
PDZD11-204ENST00000486461 NR2E3Q9Y5X4 410 aa8.09□□□□□ -1.11
PDZD11-204ENST00000486461 ZNF609O15014 1411 aa8.09□□□□□ -1.11
PDZD11-204ENST00000486461 NUP98P52948 1817 aa8.08□□□□□ -1.12
PDZD11-204ENST00000486461 ABCC4O15439 1325 aa8.08□□□□□ -1.12
PDZD11-204ENST00000486461 SIPA1L3O60292 1781 aaPredicted RBP8.08□□□□□ -1.12
PDZD11-204ENST00000486461 WTIPA6NIX2 430 aaPredicted RBP8.08□□□□□ -1.12
PDZD11-204ENST00000486461 NBPF26B4DH59 902 aa8.08□□□□□ -1.12
PDZD11-204ENST00000486461 KCNQ3O43525 872 aa8.08□□□□□ -1.12
PDZD11-204ENST00000486461 MYCP01106 439 aaPredicted RBP8.08□□□□□ -1.12
PDZD11-204ENST00000486461 INHBEP58166 350 aa8.08□□□□□ -1.12
PDZD11-204ENST00000486461 SCARF1Q14162 830 aa8.08□□□□□ -1.12
PDZD11-204ENST00000486461 NBPF10Q6P3W6 841 aaKnown RBP8.08□□□□□ -1.12
PDZD11-204ENST00000486461 C3orf67Q6ZVT6 689 aa8.08□□□□□ -1.12
PDZD11-204ENST00000486461 IFNL1Q8IU54 200 aa8.08□□□□□ -1.12
PDZD11-204ENST00000486461 IL17REQ8NFR9 667 aa8.08□□□□□ -1.12
PDZD11-204ENST00000486461 HTATIP2Q9BUP3 242 aa8.08□□□□□ -1.12
PDZD11-204ENST00000486461 DBNDD1Q9H9R9 158 aa8.08□□□□□ -1.12
PDZD11-204ENST00000486461 IBTKQ9P2D0 1353 aaPredicted RBP8.08□□□□□ -1.12
PDZD11-204ENST00000486461 MANSC4A6NHS7 340 aaPredicted RBP8.07□□□□□ -1.12
PDZD11-204ENST00000486461 BTBD11A6QL63 1104 aa8.07□□□□□ -1.12
PDZD11-204ENST00000486461 SNRPA1P09661 255 aaKnown RBP8.07□□□□□ -1.12
PDZD11-204ENST00000486461 COL9A1P20849 921 aa8.07□□□□□ -1.12
PDZD11-204ENST00000486461 GPTP24298 496 aa8.07□□□□□ -1.12
PDZD11-204ENST00000486461 NF2P35240 595 aa8.07□□□□□ -1.12
PDZD11-204ENST00000486461 SP3Q02447 781 aa8.07□□□□□ -1.12
PDZD11-204ENST00000486461 ARHGEF6Q15052 776 aa8.07□□□□□ -1.12
PDZD11-204ENST00000486461 WASHC4Q2M389 1173 aa8.07□□□□□ -1.12
PDZD11-204ENST00000486461 SUSD4Q5VX71 490 aa8.07□□□□□ -1.12
PDZD11-204ENST00000486461 SPRYD7Q5W111 196 aa8.07□□□□□ -1.12
PDZD11-204ENST00000486461 GPR153Q6NV75 609 aa8.07□□□□□ -1.12
PDZD11-204ENST00000486461 GNAT3A8MTJ3 354 aa8.06□□□□□ -1.12
PDZD11-204ENST00000486461 ERVV-1B6SEH8 477 aa8.06□□□□□ -1.12
PDZD11-204ENST00000486461 PTPN12Q05209 780 aaKnown RBP8.06□□□□□ -1.12
PDZD11-204ENST00000486461 PRAMEF18Q5VWM3 479 aa8.06□□□□□ -1.12
PDZD11-204ENST00000486461 ARMC9Q7Z3E5 817 aa8.06□□□□□ -1.12
PDZD11-204ENST00000486461 MORC1Q86VD1 984 aa8.06□□□□□ -1.12
PDZD11-204ENST00000486461 NGEFQ8N5V2 710 aa8.06□□□□□ -1.12
PDZD11-204ENST00000486461 PTCH2Q9Y6C5 1203 aa8.06□□□□□ -1.12
PDZD11-204ENST00000486461 KDM3BQ7LBC6 1761 aa8.06□□□□□ -1.12
PDZD11-204ENST00000486461 RTL9Q8NET4 1388 aa8.06□□□□□ -1.12
PDZD11-204ENST00000486461 UBN2Q6ZU65 1347 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms