RNA–Protein interactions for RNA: ENST00000486310.5

ARF4-204, Transcript of ADP ribosylation factor 4, humanhuman

TSL 3

Gene ARF4, Length 1,601 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARF4-204ENST00000486310 LAMB2P55268 1798 aa8.7□□□□□ -1.02
ARF4-204ENST00000486310 CSF1RP07333 972 aa8.7□□□□□ -1.02
ARF4-204ENST00000486310 GYS1P13807 737 aa8.7□□□□□ -1.02
ARF4-204ENST00000486310 G3BP1Q13283 466 aaKnown RBP eCLIP8.7□□□□□ -1.02
ARF4-204ENST00000486310 COL23A1Q86Y22 540 aaPredicted RBP8.7□□□□□ -1.02
ARF4-204ENST00000486310 LRRCC1Q9C099 1032 aa8.7□□□□□ -1.02
ARF4-204ENST00000486310 COPRSQ9NQ92 184 aa8.7□□□□□ -1.02
ARF4-204ENST00000486310 EXOC6BQ9Y2D4 811 aa8.7□□□□□ -1.02
ARF4-204ENST00000486310 NOP58Q9Y2X3 529 aaKnown RBP8.7□□□□□ -1.02
ARF4-204ENST00000486310 CTSWP56202 376 aa8.69□□□□□ -1.02
ARF4-204ENST00000486310 IFIT5Q13325 482 aaKnown RBP8.69□□□□□ -1.02
ARF4-204ENST00000486310 NFIXQ14938 502 aa8.69□□□□□ -1.02
ARF4-204ENST00000486310 TAF7LQ5H9L4 462 aa8.69□□□□□ -1.02
ARF4-204ENST00000486310 KIF1BPQ96EK5 621 aa8.69□□□□□ -1.02
ARF4-204ENST00000486310 EP400Q96L91 3159 aa8.69□□□□□ -1.02
ARF4-204ENST00000486310 PNPLA7Q6ZV29 1317 aa8.69□□□□□ -1.02
ARF4-204ENST00000486310 DDX60Q8IY21 1712 aaKnown RBP8.69□□□□□ -1.02
ARF4-204ENST00000486310 ANKRD18BA2A2Z9 1011 aa8.69□□□□□ -1.02
ARF4-204ENST00000486310 APBB1O00213 710 aa8.69□□□□□ -1.02
ARF4-204ENST00000486310 RGS3P49796 1198 aa8.69□□□□□ -1.02
ARF4-204ENST00000486310 CCDC152Q4G0S7 254 aa8.69□□□□□ -1.02
ARF4-204ENST00000486310 SLC10A5Q5PT55 438 aa8.69□□□□□ -1.02
ARF4-204ENST00000486310 NUTM1Q86Y26 1132 aa8.69□□□□□ -1.02
ARF4-204ENST00000486310 TTLL11Q8NHH1 800 aa8.69□□□□□ -1.02
ARF4-204ENST00000486310 NLRP3Q96P20 1036 aa8.69□□□□□ -1.02
ARF4-204ENST00000486310 LNPKQ9C0E8 428 aa8.69□□□□□ -1.02
ARF4-204ENST00000486310 FBXO3Q9UK99 471 aa8.69□□□□□ -1.02
ARF4-204ENST00000486310 SERPINB2P05120 415 aa8.68□□□□□ -1.02
ARF4-204ENST00000486310 HCLS1P14317 486 aaPredicted RBP8.68□□□□□ -1.02
ARF4-204ENST00000486310 TM4SF1P30408 202 aa8.68□□□□□ -1.02
ARF4-204ENST00000486310 RFX5P48382 616 aaPredicted RBP8.68□□□□□ -1.02
ARF4-204ENST00000486310 ST5P78524 1137 aa8.68□□□□□ -1.02
ARF4-204ENST00000486310 PTPN12Q05209 780 aaKnown RBP8.68□□□□□ -1.02
ARF4-204ENST00000486310 ERFEQ4G0M1 354 aa8.68□□□□□ -1.02
ARF4-204ENST00000486310 SYNE4Q8N205 404 aa8.68□□□□□ -1.02
ARF4-204ENST00000486310 CNBD1Q8NA66 436 aa8.68□□□□□ -1.02
ARF4-204ENST00000486310 RHPN1Q8TCX5 695 aa8.68□□□□□ -1.02
ARF4-204ENST00000486310 ANO8Q9HCE9 1232 aaPredicted RBP8.68□□□□□ -1.02
ARF4-204ENST00000486310 PA2G4Q9UQ80 394 aaKnown RBP8.68□□□□□ -1.02
ARF4-204ENST00000486310 ITGA6P23229 1130 aa8.67□□□□□ -1.02
ARF4-204ENST00000486310 IL15P40933 162 aaPredicted RBP8.67□□□□□ -1.02
ARF4-204ENST00000486310 SF3B3Q15393 1217 aaKnown RBP8.67□□□□□ -1.02
ARF4-204ENST00000486310 FAM161AQ3B820 660 aa8.67□□□□□ -1.02
ARF4-204ENST00000486310 CLASRPQ8N2M8 674 aaKnown RBP8.67□□□□□ -1.02
ARF4-204ENST00000486310 UPF1Q92900 1129 aaKnown RBP eCLIP8.67□□□□□ -1.029e-8■■■■□ 26.7
ARF4-204ENST00000486310 PARP3Q9Y6F1 533 aa8.67□□□□□ -1.02
ARF4-204ENST00000486310 RTL9Q8NET4 1388 aa8.67□□□□□ -1.02
ARF4-204ENST00000486310 EYA2O00167 538 aa8.66□□□□□ -1.02
ARF4-204ENST00000486310 SMARCA5O60264 1052 aaPredicted RBP8.66□□□□□ -1.02
ARF4-204ENST00000486310 CIAO1O76071 339 aa8.66□□□□□ -1.02
ARF4-204ENST00000486310 KLHDC4Q8TBB5 520 aa8.66□□□□□ -1.02
ARF4-204ENST00000486310 SLC16A10Q8TF71 515 aa8.66□□□□□ -1.02
ARF4-204ENST00000486310 CCDC85AQ96PX6 553 aaPredicted RBP8.66□□□□□ -1.02
ARF4-204ENST00000486310 CDC5LQ99459 802 aaKnown RBP8.66□□□□□ -1.02
ARF4-204ENST00000486310 SIL1Q9H173 461 aa8.66□□□□□ -1.02
ARF4-204ENST00000486310 GREM2Q9H772 168 aa8.66□□□□□ -1.02
ARF4-204ENST00000486310 RIC1Q4ADV7 1423 aa8.66□□□□□ -1.02
ARF4-204ENST00000486310 POLRMTO00411 1230 aaKnown RBP8.65□□□□□ -1.02
ARF4-204ENST00000486310 IGHMBP2P38935 993 aaKnown RBP8.65□□□□□ -1.02
ARF4-204ENST00000486310 PRR5LQ6MZQ0 368 aa8.65□□□□□ -1.02
ARF4-204ENST00000486310 MPHOSPH8Q99549 860 aa8.65□□□□□ -1.02
ARF4-204ENST00000486310 BCL11AQ9H165 835 aa8.65□□□□□ -1.02
ARF4-204ENST00000486310 CNNM1Q9NRU3 951 aa8.65□□□□□ -1.02
ARF4-204ENST00000486310 ABCC12Q96J65 1359 aa8.65□□□□□ -1.02
ARF4-204ENST00000486310 IFIT2P09913 472 aaKnown RBP8.65□□□□□ -1.03
ARF4-204ENST00000486310 PDE4AP27815 886 aa8.65□□□□□ -1.03
ARF4-204ENST00000486310 LDHAL6AQ6ZMR3 332 aa8.65□□□□□ -1.03
ARF4-204ENST00000486310 ZNF594Q96JF6 807 aaPredicted RBP8.65□□□□□ -1.03
ARF4-204ENST00000486310 IL1RAPL2Q9NP60 686 aa8.65□□□□□ -1.03
ARF4-204ENST00000486310 CASZ1Q86V15 1759 aa8.65□□□□□ -1.03
ARF4-204ENST00000486310 SASH1O94885 1247 aa8.64□□□□□ -1.03
ARF4-204ENST00000486310 MMP10P09238 476 aa8.64□□□□□ -1.03
ARF4-204ENST00000486310 DDR1Q08345 913 aa8.64□□□□□ -1.03
ARF4-204ENST00000486310 DDX46Q7L014 1031 aaKnown RBP8.64□□□□□ -1.03
ARF4-204ENST00000486310 SKAP1Q86WV1 359 aa8.64□□□□□ -1.03
ARF4-204ENST00000486310 ANKRD18AQ8IVF6 992 aa8.64□□□□□ -1.03
ARF4-204ENST00000486310 GPATCH3Q96I76 525 aa8.64□□□□□ -1.03
ARF4-204ENST00000486310 CEP126Q9P2H0 1117 aa8.64□□□□□ -1.03
ARF4-204ENST00000486310 AKAP2Q9Y2D5 859 aa8.64□□□□□ -1.03
ARF4-204ENST00000486310 NRXN2Q9P2S2 1712 aa8.64□□□□□ -1.03
ARF4-204ENST00000486310 MX1P20591 662 aa8.63□□□□□ -1.03
ARF4-204ENST00000486310 TFCP2Q12800 502 aa8.63□□□□□ -1.03
ARF4-204ENST00000486310 LRRC24Q50LG9 513 aa8.63□□□□□ -1.03
ARF4-204ENST00000486310 MSL1Q68DK7 614 aa8.63□□□□□ -1.03
ARF4-204ENST00000486310 ATG9AQ7Z3C6 839 aa8.63□□□□□ -1.03
ARF4-204ENST00000486310 PLEKHM2Q8IWE5 1019 aa8.63□□□□□ -1.03
ARF4-204ENST00000486310 C16orf71Q8IYS4 520 aaPredicted RBP8.63□□□□□ -1.03
ARF4-204ENST00000486310 RPGRQ92834 1020 aaKnown RBP8.63□□□□□ -1.03
ARF4-204ENST00000486310 OSBPL3Q9H4L5 887 aa8.63□□□□□ -1.03
ARF4-204ENST00000486310 GPR108Q9NPR9 543 aa8.63□□□□□ -1.03
ARF4-204ENST00000486310 SEC31BQ9NQW1 1179 aa8.63□□□□□ -1.03
ARF4-204ENST00000486310 MROH5Q6ZUA9 1318 aa8.63□□□□□ -1.03
ARF4-204ENST00000486310 ERC2O15083 957 aa8.62□□□□□ -1.03
ARF4-204ENST00000486310 PDE6BP35913 854 aa8.62□□□□□ -1.03
ARF4-204ENST00000486310 TNNI3KQ59H18 835 aa8.62□□□□□ -1.03
ARF4-204ENST00000486310 METTL24Q5JXM2 366 aa8.62□□□□□ -1.03
ARF4-204ENST00000486310 AACSQ86V21 672 aa8.62□□□□□ -1.03
ARF4-204ENST00000486310 CCDC24Q8N4L8 307 aa8.62□□□□□ -1.03
ARF4-204ENST00000486310 RBM17Q96I25 401 aaKnown RBP8.62□□□□□ -1.03
ARF4-204ENST00000486310 BRIP1Q9BX63 1249 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms