RNA–Protein interactions for RNA: ENST00000486116.5

PTPN7-213, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 4

Gene PTPN7, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-213ENST00000486116 CEMIPQ8WUJ3 1361 aa13.13□□□□□ -0.31
PTPN7-213ENST00000486116 YDJCA8MPS7 323 aa13.13□□□□□ -0.31
PTPN7-213ENST00000486116 H7C1D1 291 aa13.13□□□□□ -0.31
PTPN7-213ENST00000486116 TBC1D10BQ4KMP7 808 aaPredicted RBP13.13□□□□□ -0.31
PTPN7-213ENST00000486116 NYXQ9GZU5 481 aa13.13□□□□□ -0.31
PTPN7-213ENST00000486116 ATP6V0A2Q9Y487 856 aa13.13□□□□□ -0.31
PTPN7-213ENST00000486116 IBTKQ9P2D0 1353 aaPredicted RBP13.12□□□□□ -0.31
PTPN7-213ENST00000486116 GPR25O00155 361 aa13.12□□□□□ -0.31
PTPN7-213ENST00000486116 KIAA2012Q0VF49 1180 aa13.12□□□□□ -0.31
PTPN7-213ENST00000486116 POLR3GLQ9BT43 218 aa13.12□□□□□ -0.31
PTPN7-213ENST00000486116 ZBTB12Q9Y330 459 aaPredicted RBP13.12□□□□□ -0.31
PTPN7-213ENST00000486116 SCN9AQ15858 1988 aa13.11□□□□□ -0.31
PTPN7-213ENST00000486116 BTBD11A6QL63 1104 aa13.11□□□□□ -0.31
PTPN7-213ENST00000486116 GNAT3A8MTJ3 354 aa13.11□□□□□ -0.31
PTPN7-213ENST00000486116 NOM1Q5C9Z4 860 aaKnown RBP13.11□□□□□ -0.31
PTPN7-213ENST00000486116 SUPT20HQ8NEM7 779 aa13.11□□□□□ -0.31
PTPN7-213ENST00000486116 PANK3Q9H999 370 aa13.11□□□□□ -0.31
PTPN7-213ENST00000486116 KDM3BQ7LBC6 1761 aa13.11□□□□□ -0.31
PTPN7-213ENST00000486116 UBN2Q6ZU65 1347 aa13.11□□□□□ -0.31
PTPN7-213ENST00000486116 SLC17A8Q8NDX2 589 aa13.1□□□□□ -0.31
PTPN7-213ENST00000486116 DPF2Q92785 391 aa13.1□□□□□ -0.31
PTPN7-213ENST00000486116 DCPSQ96C86 337 aaKnown RBP13.1□□□□□ -0.31
PTPN7-213ENST00000486116 CDCA5Q96FF9 252 aa13.1□□□□□ -0.31
PTPN7-213ENST00000486116 DPP8Q6V1X1 898 aaPredicted RBP13.09□□□□□ -0.31
PTPN7-213ENST00000486116 R3HDMLQ9H3Y0 253 aa13.09□□□□□ -0.31
PTPN7-213ENST00000486116 LAMB1P07942 1786 aa13.09□□□□□ -0.31
PTPN7-213ENST00000486116 COL6A3P12111 3177 aa13.09□□□□□ -0.31
PTPN7-213ENST00000486116 ABCC4O15439 1325 aa13.09□□□□□ -0.31
PTPN7-213ENST00000486116 ASTN2O75129 1339 aaPredicted RBP13.09□□□□□ -0.31
PTPN7-213ENST00000486116 PSME4Q14997 1843 aa13.09□□□□□ -0.31
PTPN7-213ENST00000486116 PSMD14O00487 310 aa13.08□□□□□ -0.32
PTPN7-213ENST00000486116 FKTNO75072 461 aa13.08□□□□□ -0.32
PTPN7-213ENST00000486116 SNRPA1P09661 255 aaKnown RBP13.08□□□□□ -0.32
PTPN7-213ENST00000486116 RBM26Q5T8P6 1007 aaKnown RBP13.08□□□□□ -0.32
PTPN7-213ENST00000486116 SUSD4Q5VX71 490 aa13.08□□□□□ -0.32
PTPN7-213ENST00000486116 GGA3Q9NZ52 723 aa13.08□□□□□ -0.32
PTPN7-213ENST00000486116 NTSR2O95665 410 aa13.07□□□□□ -0.32
PTPN7-213ENST00000486116 EN2P19622 333 aaPredicted RBP13.07□□□□□ -0.32
PTPN7-213ENST00000486116 GPTP24298 496 aa13.07□□□□□ -0.32
PTPN7-213ENST00000486116 INTS3Q68E01 1043 aaKnown RBP13.07□□□□□ -0.32
PTPN7-213ENST00000486116 MPNDQ8N594 471 aa13.07□□□□□ -0.32
PTPN7-213ENST00000486116 OTUD5Q96G74 571 aa13.07□□□□□ -0.32
PTPN7-213ENST00000486116 TMX4Q9H1E5 349 aaPredicted RBP13.07□□□□□ -0.32
PTPN7-213ENST00000486116 A0A0C4DFX4 3053 aa13.07□□□□□ -0.32
PTPN7-213ENST00000486116 RANBP2P49792 3224 aaKnown RBP13.06□□□□□ -0.32
PTPN7-213ENST00000486116 COL3A1P02461 1466 aaPredicted RBP13.06□□□□□ -0.32
PTPN7-213ENST00000486116 TM4SF4P48230 202 aa13.06□□□□□ -0.32
PTPN7-213ENST00000486116 MOB2Q70IA6 237 aa13.06□□□□□ -0.32
PTPN7-213ENST00000486116 SULF1Q8IWU6 871 aa13.06□□□□□ -0.32
PTPN7-213ENST00000486116 SP8Q8IXZ3 490 aa13.06□□□□□ -0.32
PTPN7-213ENST00000486116 GAS2L2Q8NHY3 880 aa13.06□□□□□ -0.32
PTPN7-213ENST00000486116 CFHR5Q9BXR6 569 aa13.06□□□□□ -0.32
PTPN7-213ENST00000486116 ERVV-1B6SEH8 477 aa13.05□□□□□ -0.32
PTPN7-213ENST00000486116 KIF4BQ2VIQ3 1234 aa13.05□□□□□ -0.32
PTPN7-213ENST00000486116 MAP3K15Q6ZN16 1313 aa13.05□□□□□ -0.32
PTPN7-213ENST00000486116 RTL9Q8NET4 1388 aa13.05□□□□□ -0.32
PTPN7-213ENST00000486116 DIAPH1O60610 1272 aaKnown RBP13.04□□□□□ -0.32
PTPN7-213ENST00000486116 FKBP1BP68106 108 aa13.04□□□□□ -0.32
PTPN7-213ENST00000486116 TTLL7Q6ZT98 887 aa13.04□□□□□ -0.32
PTPN7-213ENST00000486116 ZNF34Q8IZ26 560 aa13.04□□□□□ -0.32
PTPN7-213ENST00000486116 NGEFQ8N5V2 710 aa13.04□□□□□ -0.32
PTPN7-213ENST00000486116 TRIM17Q9Y577 477 aa13.04□□□□□ -0.32
PTPN7-213ENST00000486116 H0YGN5 161 aa13.03□□□□□ -0.32
PTPN7-213ENST00000486116 RPS12P25398 132 aaKnown RBP13.03□□□□□ -0.32
PTPN7-213ENST00000486116 OTOP1Q7RTM1 612 aa13.03□□□□□ -0.32
PTPN7-213ENST00000486116 NLRP3Q96P20 1036 aa13.03□□□□□ -0.32
PTPN7-213ENST00000486116 DBNDD1Q9H9R9 158 aa13.03□□□□□ -0.32
PTPN7-213ENST00000486116 KCNQ5Q9NR82 932 aa13.03□□□□□ -0.32
PTPN7-213ENST00000486116 COL4A1P02462 1669 aa13.02□□□□□ -0.32
PTPN7-213ENST00000486116 UBE2Q2LH0YL09 131 aa13.02□□□□□ -0.33
PTPN7-213ENST00000486116 BBOX1O75936 387 aa13.02□□□□□ -0.33
PTPN7-213ENST00000486116 MKRN3Q13064 507 aaKnown RBP13.02□□□□□ -0.33
PTPN7-213ENST00000486116 ANGEL2Q5VTE6 544 aaKnown RBP13.02□□□□□ -0.33
PTPN7-213ENST00000486116 ZBTB3Q9H5J0 574 aa13.02□□□□□ -0.33
PTPN7-213ENST00000486116 ZNF609O15014 1411 aa13.02□□□□□ -0.33
PTPN7-213ENST00000486116 CHRDL2Q6WN34 429 aa13.01□□□□□ -0.33
PTPN7-213ENST00000486116 ARMC5Q96C12 935 aa13.01□□□□□ -0.33
PTPN7-213ENST00000486116 ZNF646O15015 1829 aaPredicted RBP13□□□□□ -0.33
PTPN7-213ENST00000486116 SLC10A5Q5PT55 438 aa13□□□□□ -0.33
PTPN7-213ENST00000486116 KIF6Q6ZMV9 814 aa13□□□□□ -0.33
PTPN7-213ENST00000486116 RBM27Q9P2N5 1060 aaKnown RBP13□□□□□ -0.33
PTPN7-213ENST00000486116 PTPN22Q9Y2R2 807 aa13□□□□□ -0.33
PTPN7-213ENST00000486116 ECE2O60344 883 aa12.99□□□□□ -0.33
PTPN7-213ENST00000486116 SREBF2Q12772 1141 aa12.99□□□□□ -0.33
PTPN7-213ENST00000486116 SCARF1Q14162 830 aa12.99□□□□□ -0.33
PTPN7-213ENST00000486116 WASHC4Q2M389 1173 aa12.99□□□□□ -0.33
PTPN7-213ENST00000486116 AMER1Q5JTC6 1135 aaPredicted RBP12.99□□□□□ -0.33
PTPN7-213ENST00000486116 PPP1R42Q7Z4L9 355 aa12.99□□□□□ -0.33
PTPN7-213ENST00000486116 PHACTR3Q96KR7 559 aa12.99□□□□□ -0.33
PTPN7-213ENST00000486116 SCAF8Q9UPN6 1271 aaKnown RBP12.99□□□□□ -0.33
PTPN7-213ENST00000486116 DLG5Q8TDM6 1919 aa12.98□□□□□ -0.33
PTPN7-213ENST00000486116 RIMBP2O15034 1052 aa12.98□□□□□ -0.33
PTPN7-213ENST00000486116 MNX1P50219 401 aaPredicted RBP12.98□□□□□ -0.33
PTPN7-213ENST00000486116 GRAPQ13588 217 aa12.98□□□□□ -0.33
PTPN7-213ENST00000486116 MCM10Q7L590 875 aa12.98□□□□□ -0.33
PTPN7-213ENST00000486116 GRAPLQ8TC17 118 aaPredicted RBP12.98□□□□□ -0.33
PTPN7-213ENST00000486116 KNSTRNQ9Y448 316 aa12.98□□□□□ -0.33
PTPN7-213ENST00000486116 U2SURPO15042 1029 aaKnown RBP12.97□□□□□ -0.33
PTPN7-213ENST00000486116 ZNF280AP59817 542 aaPredicted RBP12.97□□□□□ -0.33
PTPN7-213ENST00000486116 DOK7Q18PE1 504 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 95.9 ms