RNA–Protein interactions for RNA: ENST00000485737.1

SMARCC1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 4

Gene SMARCC1, Length 631 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-206ENST00000485737 A0A1W2PP64 1363 aa5.81□□□□□ -1.48
SMARCC1-206ENST00000485737 KIF24Q5T7B8 1368 aa5.81□□□□□ -1.48
SMARCC1-206ENST00000485737 EVC2Q86UK5 1308 aa5.81□□□□□ -1.48
SMARCC1-206ENST00000485737 K7ELQ4 463 aaPredicted RBP5.81□□□□□ -1.48
SMARCC1-206ENST00000485737 IPO8O15397 1037 aaKnown RBP5.81□□□□□ -1.48
SMARCC1-206ENST00000485737 UPP2O95045 317 aa5.81□□□□□ -1.48
SMARCC1-206ENST00000485737 HSP90AB1P08238 724 aaKnown RBP5.81□□□□□ -1.48
SMARCC1-206ENST00000485737 TMPOP42166 694 aaKnown RBP5.81□□□□□ -1.48
SMARCC1-206ENST00000485737 ZNF445P59923 1031 aa5.81□□□□□ -1.48
SMARCC1-206ENST00000485737 EXOSC9Q06265 439 aaKnown RBP5.81□□□□□ -1.48
SMARCC1-206ENST00000485737 KLHL40Q2TBA0 621 aa5.81□□□□□ -1.48
SMARCC1-206ENST00000485737 CHD1LQ86WJ1 897 aa5.81□□□□□ -1.48
SMARCC1-206ENST00000485737 ITPRIPQ8IWB1 547 aa5.81□□□□□ -1.48
SMARCC1-206ENST00000485737 TMEM57Q8N5G2 664 aa5.81□□□□□ -1.48
SMARCC1-206ENST00000485737 ARHGAP45Q92619 1136 aa5.81□□□□□ -1.48
SMARCC1-206ENST00000485737 GCC1Q96CN9 775 aa5.81□□□□□ -1.48
SMARCC1-206ENST00000485737 GJD4Q96KN9 370 aaPredicted RBP5.81□□□□□ -1.48
SMARCC1-206ENST00000485737 KLF16Q9BXK1 252 aaPredicted RBP5.81□□□□□ -1.48
SMARCC1-206ENST00000485737 SLC12A5Q9H2X9 1139 aa5.81□□□□□ -1.48
SMARCC1-206ENST00000485737 SNRKQ9NRH2 765 aa5.81□□□□□ -1.48
SMARCC1-206ENST00000485737 EMILIN1Q9Y6C2 1016 aa5.81□□□□□ -1.48
SMARCC1-206ENST00000485737 CD163L1Q9NR16 1453 aa5.81□□□□□ -1.48
SMARCC1-206ENST00000485737 POGZQ7Z3K3 1410 aa5.81□□□□□ -1.48
SMARCC1-206ENST00000485737 KIF20BQ96Q89 1820 aa5.81□□□□□ -1.48
SMARCC1-206ENST00000485737 ATAD2Q6PL18 1390 aa5.8□□□□□ -1.48
SMARCC1-206ENST00000485737 ABCC4O15439 1325 aa5.8□□□□□ -1.48
SMARCC1-206ENST00000485737 PTPRMP28827 1452 aa5.8□□□□□ -1.48
SMARCC1-206ENST00000485737 KIF3BO15066 747 aa5.8□□□□□ -1.48
SMARCC1-206ENST00000485737 OFD1O75665 1012 aa5.8□□□□□ -1.48
SMARCC1-206ENST00000485737 U2AF1L5P0DN76 240 aaPredicted RBP5.8□□□□□ -1.48
SMARCC1-206ENST00000485737 BMP2P12643 396 aa5.8□□□□□ -1.48
SMARCC1-206ENST00000485737 U2AF1Q01081 240 aaKnown RBP eCLIP5.8□□□□□ -1.48
SMARCC1-206ENST00000485737 NBPF20Q3BBV1 942 aa5.8□□□□□ -1.48
SMARCC1-206ENST00000485737 PPP1R26Q5T8A7 1209 aaPredicted RBP5.8□□□□□ -1.48
SMARCC1-206ENST00000485737 ZSCAN30Q86W11 494 aa5.8□□□□□ -1.48
SMARCC1-206ENST00000485737 GAS2L3Q86XJ1 694 aa5.8□□□□□ -1.48
SMARCC1-206ENST00000485737 BANK1Q8NDB2 785 aa5.8□□□□□ -1.48
SMARCC1-206ENST00000485737 TSR2Q969E8 191 aaKnown RBP5.8□□□□□ -1.48
SMARCC1-206ENST00000485737 TRIM44Q96DX7 344 aaPredicted RBP5.8□□□□□ -1.48
SMARCC1-206ENST00000485737 PGPEP1Q9NXJ5 209 aa5.8□□□□□ -1.48
SMARCC1-206ENST00000485737 PCDHB9Q9Y5E1 797 aa5.8□□□□□ -1.48
SMARCC1-206ENST00000485737 ZBBXA8MT70 800 aa5.79□□□□□ -1.48
SMARCC1-206ENST00000485737 GOLGA6L22H0YM25 854 aa5.79□□□□□ -1.48
SMARCC1-206ENST00000485737 APBB1O00213 710 aa5.79□□□□□ -1.48
SMARCC1-206ENST00000485737 CYP2E1P05181 493 aaPredicted RBP5.79□□□□□ -1.48
SMARCC1-206ENST00000485737 NASPP49321 788 aaPredicted RBP5.79□□□□□ -1.48
SMARCC1-206ENST00000485737 DHX9Q08211 1270 aaKnown RBP5.79□□□□□ -1.48
SMARCC1-206ENST00000485737 INTS6LQ5JSJ4 861 aaKnown RBP5.79□□□□□ -1.48
SMARCC1-206ENST00000485737 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.79□□□□□ -1.48
SMARCC1-206ENST00000485737 MTMR14Q8NCE2 650 aa5.79□□□□□ -1.48
SMARCC1-206ENST00000485737 PDLIM2Q96JY6 352 aa5.79□□□□□ -1.48
SMARCC1-206ENST00000485737 PDCL3Q9H2J4 239 aa5.79□□□□□ -1.48
SMARCC1-206ENST00000485737 NOB1Q9ULX3 412 aaKnown RBP5.79□□□□□ -1.48
SMARCC1-206ENST00000485737 NDUFB9Q9Y6M9 179 aa5.79□□□□□ -1.48
SMARCC1-206ENST00000485737 SIGLEC1Q9BZZ2 1709 aa5.79□□□□□ -1.48
SMARCC1-206ENST00000485737 ATP7BP35670 1465 aa5.78□□□□□ -1.48
SMARCC1-206ENST00000485737 CDK12Q9NYV4 1490 aaPredicted RBP5.78□□□□□ -1.48
SMARCC1-206ENST00000485737 CDC45O75419 566 aa5.78□□□□□ -1.48
SMARCC1-206ENST00000485737 BAG4O95429 457 aaKnown RBP5.78□□□□□ -1.48
SMARCC1-206ENST00000485737 FBXO45P0C2W1 286 aa5.78□□□□□ -1.48
SMARCC1-206ENST00000485737 CBLBQ13191 982 aa5.78□□□□□ -1.48
SMARCC1-206ENST00000485737 RABEP1Q15276 862 aa5.78□□□□□ -1.48
SMARCC1-206ENST00000485737 TBC1D9Q6ZT07 1266 aa5.78□□□□□ -1.48
SMARCC1-206ENST00000485737 KNDC1Q76NI1 1749 aa5.78□□□□□ -1.48
SMARCC1-206ENST00000485737 LINC00528Q8N1L1 170 aa5.78□□□□□ -1.48
SMARCC1-206ENST00000485737 MEIOBQ8N635 442 aa5.78□□□□□ -1.48
SMARCC1-206ENST00000485737 ARXQ96QS3 562 aa5.78□□□□□ -1.48
SMARCC1-206ENST00000485737 MAP7D2Q96T17 732 aa5.78□□□□□ -1.48
SMARCC1-206ENST00000485737 TRAK1Q9UPV9 953 aa5.78□□□□□ -1.48
SMARCC1-206ENST00000485737 DLC1Q96QB1 1528 aa5.78□□□□□ -1.48
SMARCC1-206ENST00000485737 NRKQ7Z2Y5 1582 aa5.77□□□□□ -1.49
SMARCC1-206ENST00000485737 CPSF1Q10570 1443 aaKnown RBP5.77□□□□□ -1.49
SMARCC1-206ENST00000485737 ATP10DQ9P241 1426 aa5.77□□□□□ -1.49
SMARCC1-206ENST00000485737 SOBPA7XYQ1 873 aa5.77□□□□□ -1.49
SMARCC1-206ENST00000485737 ZBTB7BO15156 539 aaPredicted RBP5.77□□□□□ -1.49
SMARCC1-206ENST00000485737 ZNF500O60304 480 aaPredicted RBP5.77□□□□□ -1.49
SMARCC1-206ENST00000485737 SSFA2P28290 1259 aa5.77□□□□□ -1.49
SMARCC1-206ENST00000485737 MCM5P33992 734 aa5.77□□□□□ -1.49
SMARCC1-206ENST00000485737 TNNT2P45379 298 aaPredicted RBP5.77□□□□□ -1.49
SMARCC1-206ENST00000485737 NUCB2P80303 420 aa5.77□□□□□ -1.49
SMARCC1-206ENST00000485737 CALD1Q05682 793 aaKnown RBP5.77□□□□□ -1.49
SMARCC1-206ENST00000485737 ZSCAN1Q8NBB4 408 aa5.77□□□□□ -1.49
SMARCC1-206ENST00000485737 GAS2L2Q8NHY3 880 aa5.77□□□□□ -1.49
SMARCC1-206ENST00000485737 LNPKQ9C0E8 428 aa5.77□□□□□ -1.49
SMARCC1-206ENST00000485737 ZMYND15Q9H091 742 aa5.77□□□□□ -1.49
SMARCC1-206ENST00000485737 ARHGEF40Q8TER5 1519 aa5.77□□□□□ -1.49
SMARCC1-206ENST00000485737 YTHDC2Q9H6S0 1430 aaKnown RBP5.76□□□□□ -1.49
SMARCC1-206ENST00000485737 RNF225M0QZC1 329 aaPredicted RBP5.76□□□□□ -1.49
SMARCC1-206ENST00000485737 MAN1A2O60476 641 aa5.76□□□□□ -1.49
SMARCC1-206ENST00000485737 KIAA1211Q6ZU35 1233 aa5.76□□□□□ -1.49
SMARCC1-206ENST00000485737 ANP32BQ92688 251 aaKnown RBP5.76□□□□□ -1.49
SMARCC1-206ENST00000485737 TSEN34Q9BSV6 310 aaKnown RBP5.76□□□□□ -1.49
SMARCC1-206ENST00000485737 PRM3Q9NNZ6 103 aa5.76□□□□□ -1.49
SMARCC1-206ENST00000485737 TMPRSS4Q9NRS4 437 aa5.76□□□□□ -1.49
SMARCC1-206ENST00000485737 IFT57Q9NWB7 429 aa5.76□□□□□ -1.49
SMARCC1-206ENST00000485737 NXF1Q9UBU9 619 aaKnown RBP5.76□□□□□ -1.49
SMARCC1-206ENST00000485737 NOL7Q9UMY1 257 aaKnown RBP5.76□□□□□ -1.49
SMARCC1-206ENST00000485737 ZNF330Q9Y3S2 320 aaPredicted RBP5.76□□□□□ -1.49
SMARCC1-206ENST00000485737 TMEM131LA2VDJ0 1609 aa5.76□□□□□ -1.49
SMARCC1-206ENST00000485737 DIP2CQ9Y2E4 1556 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms