RNA–Protein interactions for RNA: ENST00000479555.1

CMSS1-204, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 4

Gene CMSS1, Length 654 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-204ENST00000479555 IFT43Q96FT9 208 aa7.81□□□□□ -1.16
CMSS1-204ENST00000479555 LPIN3Q9BQK8 851 aa7.81□□□□□ -1.16
CMSS1-204ENST00000479555 QTRT2Q9H974 415 aaKnown RBP7.81□□□□□ -1.16
CMSS1-204ENST00000479555 SASH3O75995 380 aa7.8□□□□□ -1.16
CMSS1-204ENST00000479555 IGFBP4P22692 258 aa7.8□□□□□ -1.16
CMSS1-204ENST00000479555 HIF1AQ16665 826 aa7.8□□□□□ -1.16
CMSS1-204ENST00000479555 ARTNQ5T4W7 220 aa7.8□□□□□ -1.16
CMSS1-204ENST00000479555 ILDR2Q71H61 639 aa7.8□□□□□ -1.16
CMSS1-204ENST00000479555 CALR3Q96L12 384 aaKnown RBP7.8□□□□□ -1.16
CMSS1-204ENST00000479555 ZFP64Q9NPA5 681 aa7.8□□□□□ -1.16
CMSS1-204ENST00000479555 LMOD1P29536 600 aaPredicted RBP7.79□□□□□ -1.16
CMSS1-204ENST00000479555 MSL1Q68DK7 614 aa7.79□□□□□ -1.16
CMSS1-204ENST00000479555 DHX32Q7L7V1 743 aaKnown RBP7.79□□□□□ -1.16
CMSS1-204ENST00000479555 H2AFB1P0C5Y9 115 aa7.78□□□□□ -1.16
CMSS1-204ENST00000479555 H2AFB2P0C5Z0 115 aa7.78□□□□□ -1.16
CMSS1-204ENST00000479555 IREB2P48200 963 aaKnown RBP7.78□□□□□ -1.16
CMSS1-204ENST00000479555 CDCA8Q53HL2 280 aa7.78□□□□□ -1.16
CMSS1-204ENST00000479555 ARXQ96QS3 562 aa7.78□□□□□ -1.16
CMSS1-204ENST00000479555 SSBP4Q9BWG4 385 aaPredicted RBP7.78□□□□□ -1.16
CMSS1-204ENST00000479555 MICAL2O94851 1124 aa7.77□□□□□ -1.17
CMSS1-204ENST00000479555 RARAP10276 462 aa7.77□□□□□ -1.17
CMSS1-204ENST00000479555 ARSDP51689 593 aa7.77□□□□□ -1.17
CMSS1-204ENST00000479555 ELMSAN1Q6PJG2 1045 aa7.77□□□□□ -1.17
CMSS1-204ENST00000479555 FAM196BA6NMK8 535 aa7.76□□□□□ -1.17
CMSS1-204ENST00000479555 EPB42P16452 691 aa7.76□□□□□ -1.17
CMSS1-204ENST00000479555 NOS3P29474 1203 aa7.76□□□□□ -1.17
CMSS1-204ENST00000479555 WFDC12Q8WWY7 111 aa7.76□□□□□ -1.17
CMSS1-204ENST00000479555 SMG9Q9H0W8 520 aaKnown RBP7.76□□□□□ -1.17
CMSS1-204ENST00000479555 VRTNQ9H8Y1 702 aa7.76□□□□□ -1.17
CMSS1-204ENST00000479555 EFCC1Q9HA90 598 aa7.76□□□□□ -1.17
CMSS1-204ENST00000479555 LRFN2Q9ULH4 789 aa7.76□□□□□ -1.17
CMSS1-204ENST00000479555 OPLAHO14841 1288 aa7.75□□□□□ -1.17
CMSS1-204ENST00000479555 DEAF1O75398 565 aaPredicted RBP7.75□□□□□ -1.17
CMSS1-204ENST00000479555 MAP3K6O95382 1288 aa7.75□□□□□ -1.17
CMSS1-204ENST00000479555 WEE1P30291 646 aa7.75□□□□□ -1.17
CMSS1-204ENST00000479555 FBXO11Q86XK2 927 aa7.75□□□□□ -1.17
CMSS1-204ENST00000479555 WFDC8Q8IUA0 241 aa7.75□□□□□ -1.17
CMSS1-204ENST00000479555 TRPM4Q8TD43 1214 aa7.75□□□□□ -1.17
CMSS1-204ENST00000479555 MEGF10Q96KG7 1140 aa7.75□□□□□ -1.17
CMSS1-204ENST00000479555 KRTAP4-12Q9BQ66 201 aa7.75□□□□□ -1.17
CMSS1-204ENST00000479555 J3QW42 95 aa7.74□□□□□ -1.17
CMSS1-204ENST00000479555 EIF2AK2P19525 551 aaKnown RBP7.74□□□□□ -1.17
CMSS1-204ENST00000479555 GPLD1P80108 840 aa7.74□□□□□ -1.17
CMSS1-204ENST00000479555 RGL4Q8IZJ4 473 aa7.74□□□□□ -1.17
CMSS1-204ENST00000479555 KRTAP9-9Q9BYP9 154 aa7.74□□□□□ -1.17
CMSS1-204ENST00000479555 KRTAP9-4Q9BYQ2 154 aa7.74□□□□□ -1.17
CMSS1-204ENST00000479555 RTCBQ9Y3I0 505 aaKnown RBP7.74□□□□□ -1.17
CMSS1-204ENST00000479555 HYAL3O43820 417 aaPredicted RBP7.73□□□□□ -1.17
CMSS1-204ENST00000479555 VTI1AQ96AJ9 217 aa7.73□□□□□ -1.17
CMSS1-204ENST00000479555 NSUN5Q96P11 429 aaKnown RBP7.73□□□□□ -1.17
CMSS1-204ENST00000479555 FRRS1LQ9P0K9 344 aa7.73□□□□□ -1.17
CMSS1-204ENST00000479555 ALX3O95076 343 aa7.72□□□□□ -1.17
CMSS1-204ENST00000479555 LRP8Q14114 963 aa7.72□□□□□ -1.17
CMSS1-204ENST00000479555 C11orf91Q3C1V1 193 aa7.72□□□□□ -1.17
CMSS1-204ENST00000479555 NBPF11Q86T75 865 aa7.72□□□□□ -1.17
CMSS1-204ENST00000479555 TREML1Q86YW5 311 aa7.72□□□□□ -1.17
CMSS1-204ENST00000479555 CMTR1Q8N1G2 835 aaKnown RBP7.72□□□□□ -1.17
CMSS1-204ENST00000479555 PRIMPOLQ96LW4 560 aa7.72□□□□□ -1.17
CMSS1-204ENST00000479555 FOXO3O43524 673 aa7.71□□□□□ -1.18
CMSS1-204ENST00000479555 XYLBO75191 536 aa7.71□□□□□ -1.18
CMSS1-204ENST00000479555 FKBP5Q13451 457 aaPredicted RBP7.71□□□□□ -1.18
CMSS1-204ENST00000479555 FAM26DQ5JW98 314 aa7.71□□□□□ -1.18
CMSS1-204ENST00000479555 CFAP70Q5T0N1 1121 aa7.71□□□□□ -1.18
CMSS1-204ENST00000479555 GDF6Q6KF10 455 aaPredicted RBP7.71□□□□□ -1.18
CMSS1-204ENST00000479555 MYO19Q96H55 970 aa7.71□□□□□ -1.18
CMSS1-204ENST00000479555 COX20Q5RI15 118 aa7.7□□□□□ -1.18
CMSS1-204ENST00000479555 DTWD1Q8N5C7 304 aa7.7□□□□□ -1.18
CMSS1-204ENST00000479555 PLD4Q96BZ4 506 aa7.7□□□□□ -1.18
CMSS1-204ENST00000479555 TLR7Q9NYK1 1049 aaKnown RBP7.7□□□□□ -1.18
CMSS1-204ENST00000479555 DLL1O00548 723 aa7.69□□□□□ -1.18
CMSS1-204ENST00000479555 MMP20O60882 483 aa7.69□□□□□ -1.18
CMSS1-204ENST00000479555 RFX1P22670 979 aa7.69□□□□□ -1.18
CMSS1-204ENST00000479555 NRLP54845 237 aa7.69□□□□□ -1.18
CMSS1-204ENST00000479555 PCSK7Q16549 785 aa7.69□□□□□ -1.18
CMSS1-204ENST00000479555 FAM200AQ8TCP9 573 aa7.69□□□□□ -1.18
CMSS1-204ENST00000479555 SAP130Q9H0E3 1048 aa7.69□□□□□ -1.18
CMSS1-204ENST00000479555 KCNMB2Q9Y691 235 aa7.69□□□□□ -1.18
CMSS1-204ENST00000479555 KRTAP4-8A0A0G2JLE6 195 aa7.68□□□□□ -1.18
CMSS1-204ENST00000479555 PRMT3O60678 531 aa7.68□□□□□ -1.18
CMSS1-204ENST00000479555 ETFBKMTQ8IXQ9 262 aa7.68□□□□□ -1.18
CMSS1-204ENST00000479555 ZNF777Q9ULD5 760 aaPredicted RBP7.68□□□□□ -1.18
CMSS1-204ENST00000479555 TRIM33Q9UPN9 1127 aa7.68□□□□□ -1.18
CMSS1-204ENST00000479555 LOC102724428A0A0B4J2F2 783 aa7.67□□□□□ -1.18
CMSS1-204ENST00000479555 A6NJR5 290 aa7.67□□□□□ -1.18
CMSS1-204ENST00000479555 SIK1P57059 783 aa7.67□□□□□ -1.18
CMSS1-204ENST00000479555 TRIP4Q15650 581 aaPredicted RBP7.67□□□□□ -1.18
CMSS1-204ENST00000479555 IGF2-ASQ6U949 168 aa7.67□□□□□ -1.18
CMSS1-204ENST00000479555 CAPN12Q6ZSI9 719 aa7.67□□□□□ -1.18
CMSS1-204ENST00000479555 AGGF1Q8N302 714 aaeCLIP7.67□□□□□ -1.18
CMSS1-204ENST00000479555 TTC9Q92623 222 aa7.67□□□□□ -1.18
CMSS1-204ENST00000479555 NOVA2Q9UNW9 492 aaKnown RBP7.67□□□□□ -1.18
CMSS1-204ENST00000479555 IL22RA1Q8N6P7 574 aa7.66□□□□□ -1.18
CMSS1-204ENST00000479555 MKNK1Q9BUB5 465 aa7.66□□□□□ -1.18
CMSS1-204ENST00000479555 EGFRP00533 1210 aa7.65□□□□□ -1.18
CMSS1-204ENST00000479555 PSAPP07602 524 aa7.65□□□□□ -1.18
CMSS1-204ENST00000479555 PRR23CQ6ZRP0 262 aa7.65□□□□□ -1.18
CMSS1-204ENST00000479555 AKTIPQ9H8T0 292 aa7.65□□□□□ -1.18
CMSS1-204ENST00000479555 ZMIZ1Q9ULJ6 1067 aa7.65□□□□□ -1.18
CMSS1-204ENST00000479555 BTBD11A6QL63 1104 aa7.64□□□□□ -1.19
CMSS1-204ENST00000479555 SETDB1Q15047 1291 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms