RNA–Protein interactions for RNA: ENST00000478842.5

SSR3-207, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 3

Gene SSR3, Length 612 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-207ENST00000478842 GAS2L1Q99501 681 aaPredicted RBP9.44□□□□□ -0.9
SSR3-207ENST00000478842 BCL11AQ9H165 835 aa9.44□□□□□ -0.9
SSR3-207ENST00000478842 GPAMQ9HCL2 828 aa9.44□□□□□ -0.9
SSR3-207ENST00000478842 FNDC3AQ9Y2H6 1198 aaKnown RBP9.44□□□□□ -0.9
SSR3-207ENST00000478842 KIF27Q86VH2 1401 aa9.44□□□□□ -0.9
SSR3-207ENST00000478842 H7C1W4 665 aa9.43□□□□□ -0.9
SSR3-207ENST00000478842 INPP5BP32019 993 aa9.43□□□□□ -0.9
SSR3-207ENST00000478842 ZNF326Q5BKZ1 582 aaKnown RBP9.43□□□□□ -0.9
SSR3-207ENST00000478842 SAMD5Q5TGI4 173 aa9.43□□□□□ -0.9
SSR3-207ENST00000478842 FIGNL1Q6PIW4 674 aa9.43□□□□□ -0.9
SSR3-207ENST00000478842 ALKBH8Q96BT7 664 aaKnown RBP9.43□□□□□ -0.9
SSR3-207ENST00000478842 RUBCNLQ9H714 662 aa9.43□□□□□ -0.9
SSR3-207ENST00000478842 IQGAP2Q13576 1575 aa9.42□□□□□ -0.9
SSR3-207ENST00000478842 SENP3-EIF4A1A0A087X0R7 540 aa9.42□□□□□ -0.9
SSR3-207ENST00000478842 OPLAHO14841 1288 aa9.42□□□□□ -0.9
SSR3-207ENST00000478842 NEFLP07196 543 aa9.42□□□□□ -0.9
SSR3-207ENST00000478842 PLCB3Q01970 1234 aa9.42□□□□□ -0.9
SSR3-207ENST00000478842 NUDT16Q96DE0 195 aaKnown RBP9.42□□□□□ -0.9
SSR3-207ENST00000478842 TRIM47Q96LD4 638 aa9.42□□□□□ -0.9
SSR3-207ENST00000478842 C11orf16Q9NQ32 467 aa9.42□□□□□ -0.9
SSR3-207ENST00000478842 PTSQ03393 145 aa9.41□□□□□ -0.9
SSR3-207ENST00000478842 EAPPQ56P03 285 aaPredicted RBP9.41□□□□□ -0.9
SSR3-207ENST00000478842 CEP63Q96MT8 703 aa9.41□□□□□ -0.9
SSR3-207ENST00000478842 ZCCHC11Q5TAX3 1644 aaKnown RBP9.41□□□□□ -0.9
SSR3-207ENST00000478842 SLC35F4A4IF30 521 aa9.4□□□□□ -0.9
SSR3-207ENST00000478842 E9PSI1 815 aa9.4□□□□□ -0.9
SSR3-207ENST00000478842 ZNF16P17020 682 aaPredicted RBP9.4□□□□□ -0.9
SSR3-207ENST00000478842 FMR1Q06787 632 aaKnown RBP eCLIP9.4□□□□□ -0.9
SSR3-207ENST00000478842 DSC3Q14574 896 aa9.4□□□□□ -0.9
SSR3-207ENST00000478842 FBXO33Q7Z6M2 555 aa9.4□□□□□ -0.9
SSR3-207ENST00000478842 GIPC2Q8TF65 315 aa9.4□□□□□ -0.9
SSR3-207ENST00000478842 KLRG1Q96E93 195 aa9.4□□□□□ -0.9
SSR3-207ENST00000478842 GMCL1Q96IK5 515 aa9.4□□□□□ -0.9
SSR3-207ENST00000478842 DACH1Q9UI36 760 aa9.4□□□□□ -0.9
SSR3-207ENST00000478842 RTCBQ9Y3I0 505 aaKnown RBP9.4□□□□□ -0.9
SSR3-207ENST00000478842 CARMIL1Q5VZK9 1371 aa9.39□□□□□ -0.91
SSR3-207ENST00000478842 TTBK1Q5TCY1 1321 aaPredicted RBP9.39□□□□□ -0.91
SSR3-207ENST00000478842 IGHA2P01877 340 aa9.39□□□□□ -0.91
SSR3-207ENST00000478842 TYRO3Q06418 890 aa9.39□□□□□ -0.91
SSR3-207ENST00000478842 C8orf34Q49A92 452 aa9.39□□□□□ -0.91
SSR3-207ENST00000478842 RIPOR1Q6ZS17 1223 aa9.39□□□□□ -0.91
SSR3-207ENST00000478842 DISP1Q96F81 1524 aa9.39□□□□□ -0.91
SSR3-207ENST00000478842 CFAP43Q8NDM7 1665 aa9.39□□□□□ -0.91
SSR3-207ENST00000478842 MAGI3Q5TCQ9 1506 aa9.38□□□□□ -0.91
SSR3-207ENST00000478842 GPR182O15218 404 aa9.38□□□□□ -0.91
SSR3-207ENST00000478842 FAM157BP0CG42 384 aa9.38□□□□□ -0.91
SSR3-207ENST00000478842 NUCKS1Q9H1E3 243 aaKnown RBP9.38□□□□□ -0.91
SSR3-207ENST00000478842 BRD7Q9NPI1 651 aa9.38□□□□□ -0.91
SSR3-207ENST00000478842 PCDHGC4Q9Y5F7 938 aa9.38□□□□□ -0.91
SSR3-207ENST00000478842 WDR7Q9Y4E6 1490 aa9.37□□□□□ -0.91
SSR3-207ENST00000478842 SOBPA7XYQ1 873 aa9.37□□□□□ -0.91
SSR3-207ENST00000478842 P4HBP07237 508 aaKnown RBP9.37□□□□□ -0.91
SSR3-207ENST00000478842 ITGAEP38570 1179 aa9.37□□□□□ -0.91
SSR3-207ENST00000478842 PDE12Q6L8Q7 609 aaKnown RBP9.37□□□□□ -0.91
SSR3-207ENST00000478842 CCDC155Q8N6L0 562 aa9.37□□□□□ -0.91
SSR3-207ENST00000478842 UBAP1LF5GYI3 381 aa9.36□□□□□ -0.91
SSR3-207ENST00000478842 ATXN7O15265 892 aaPredicted RBP9.36□□□□□ -0.91
SSR3-207ENST00000478842 KCNQ4P56696 695 aa9.36□□□□□ -0.91
SSR3-207ENST00000478842 ATP2B2Q01814 1243 aa9.36□□□□□ -0.91
SSR3-207ENST00000478842 LAMC2Q13753 1193 aa9.36□□□□□ -0.91
SSR3-207ENST00000478842 XKR5Q6UX68 686 aa9.36□□□□□ -0.91
SSR3-207ENST00000478842 TRIM22Q8IYM9 498 aa9.36□□□□□ -0.91
SSR3-207ENST00000478842 CMTR1Q8N1G2 835 aaKnown RBP9.36□□□□□ -0.91
SSR3-207ENST00000478842 ZNF428Q96B54 188 aa9.36□□□□□ -0.91
SSR3-207ENST00000478842 ZCCHC2Q9C0B9 1178 aaKnown RBP9.36□□□□□ -0.91
SSR3-207ENST00000478842 NIF3L1Q9GZT8 377 aa9.36□□□□□ -0.91
SSR3-207ENST00000478842 UGGT2Q9NYU1 1516 aa9.36□□□□□ -0.91
SSR3-207ENST00000478842 MAPK8P45983 427 aa9.35□□□□□ -0.91
SSR3-207ENST00000478842 CD109Q6YHK3 1445 aa9.35□□□□□ -0.91
SSR3-207ENST00000478842 DNAJC25Q9H1X3 360 aa9.35□□□□□ -0.91
SSR3-207ENST00000478842 GGNBP2Q9H3C7 697 aa9.35□□□□□ -0.91
SSR3-207ENST00000478842 EGFRP00533 1210 aa9.34□□□□□ -0.91
SSR3-207ENST00000478842 ZNF438Q7Z4V0 828 aa9.34□□□□□ -0.91
SSR3-207ENST00000478842 GMPR2Q9P2T1 348 aaKnown RBP9.34□□□□□ -0.91
SSR3-207ENST00000478842 KCNH4Q9UQ05 1017 aa9.34□□□□□ -0.91
SSR3-207ENST00000478842 KCNMB2Q9Y691 235 aa9.34□□□□□ -0.91
SSR3-207ENST00000478842 KIF21BO75037 1637 aa9.34□□□□□ -0.91
SSR3-207ENST00000478842 ARAP3Q8WWN8 1544 aa9.33□□□□□ -0.92
SSR3-207ENST00000478842 EFSO43281 561 aa9.33□□□□□ -0.92
SSR3-207ENST00000478842 XYLBO75191 536 aa9.33□□□□□ -0.92
SSR3-207ENST00000478842 LDHBP07195 334 aaKnown RBP9.33□□□□□ -0.92
SSR3-207ENST00000478842 ENOX2Q16206 610 aaKnown RBP9.33□□□□□ -0.92
SSR3-207ENST00000478842 Q6ZNB5 142 aa9.33□□□□□ -0.92
SSR3-207ENST00000478842 SNX29Q8TEQ0 813 aa9.33□□□□□ -0.92
SSR3-207ENST00000478842 KIAA0556O60303 1618 aa9.33□□□□□ -0.92
SSR3-207ENST00000478842 ADAMTSL3P82987 1691 aa9.32□□□□□ -0.92
SSR3-207ENST00000478842 PRPF40AO75400 957 aaKnown RBP9.32□□□□□ -0.92
SSR3-207ENST00000478842 ITGA6P23229 1130 aa9.32□□□□□ -0.92
SSR3-207ENST00000478842 ALG1LQ6GMV1 187 aa9.32□□□□□ -0.92
SSR3-207ENST00000478842 FOXR1Q6PIV2 292 aa9.32□□□□□ -0.92
SSR3-207ENST00000478842 FBF1Q8TES7 1133 aa9.32□□□□□ -0.92
SSR3-207ENST00000478842 EFCC1Q9HA90 598 aa9.32□□□□□ -0.92
SSR3-207ENST00000478842 PHF24Q9UPV7 400 aa9.32□□□□□ -0.92
SSR3-207ENST00000478842 USP20Q9Y2K6 914 aa9.32□□□□□ -0.92
SSR3-207ENST00000478842 PNMA6FA0A0J9YX94 578 aa9.31□□□□□ -0.92
SSR3-207ENST00000478842 C11orf95C9JLR9 678 aaPredicted RBP9.31□□□□□ -0.92
SSR3-207ENST00000478842 KHNYNO15037 678 aaKnown RBP9.31□□□□□ -0.92
SSR3-207ENST00000478842 TNFRSF21O75509 655 aa9.31□□□□□ -0.92
SSR3-207ENST00000478842 TNP2Q05952 138 aa9.31□□□□□ -0.92
SSR3-207ENST00000478842 TRIP4Q15650 581 aaPredicted RBP9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 126.2 ms