RNA–Protein interactions for RNA: ENST00000478288.5

ABCF3-212, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 3

Gene ABCF3, Length 754 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-212ENST00000478288 DPP8Q6V1X1 898 aaPredicted RBP16.92■□□□□ 0.3
ABCF3-212ENST00000478288 NECTIN2Q92692 538 aa16.92■□□□□ 0.3
ABCF3-212ENST00000478288 PRDM10Q9NQV6 1147 aa16.92■□□□□ 0.3
ABCF3-212ENST00000478288 ADARB2Q9NS39 739 aaKnown RBP16.92■□□□□ 0.3
ABCF3-212ENST00000478288 GPRC5DQ9NZD1 345 aa16.92■□□□□ 0.3
ABCF3-212ENST00000478288 ADAMTS8Q9UP79 889 aa16.92■□□□□ 0.3
ABCF3-212ENST00000478288 DUOX1Q9NRD9 1551 aa16.92■□□□□ 0.3
ABCF3-212ENST00000478288 DEFB115Q30KQ5 88 aa16.91■□□□□ 0.3
ABCF3-212ENST00000478288 ANKRD13DQ6ZTN6 518 aa16.91■□□□□ 0.3
ABCF3-212ENST00000478288 MPNDQ8N594 471 aa16.91■□□□□ 0.3
ABCF3-212ENST00000478288 ISCA1Q9BUE6 129 aa16.91■□□□□ 0.3
ABCF3-212ENST00000478288 HYPKQ9NX55 129 aa16.91■□□□□ 0.3
ABCF3-212ENST00000478288 FOXN1O15353 648 aa16.9■□□□□ 0.3
ABCF3-212ENST00000478288 CXCL9Q07325 125 aa16.9■□□□□ 0.3
ABCF3-212ENST00000478288 TRIM28Q13263 835 aaKnown RBP16.9■□□□□ 0.3
ABCF3-212ENST00000478288 AIDAQ96BJ3 306 aa16.9■□□□□ 0.3
ABCF3-212ENST00000478288 WBP1LQ9NX94 342 aa16.9■□□□□ 0.3
ABCF3-212ENST00000478288 LAS1LQ9Y4W2 734 aaKnown RBP16.9■□□□□ 0.3
ABCF3-212ENST00000478288 ZNF853P0CG23 659 aa16.89■□□□□ 0.29
ABCF3-212ENST00000478288 CTCFP49711 727 aaPredicted RBP16.89■□□□□ 0.29
ABCF3-212ENST00000478288 SF3B3Q15393 1217 aaKnown RBP16.89■□□□□ 0.29
ABCF3-212ENST00000478288 PRKRIP1Q9H875 184 aaPredicted RBP16.89■□□□□ 0.29
ABCF3-212ENST00000478288 CALD1Q05682 793 aaKnown RBP16.88■□□□□ 0.29
ABCF3-212ENST00000478288 TNIP1Q15025 636 aa16.88■□□□□ 0.29
ABCF3-212ENST00000478288 DUSP27Q5VZP5 1158 aa16.88■□□□□ 0.29
ABCF3-212ENST00000478288 CIAPIN1Q6FI81 312 aa16.88■□□□□ 0.29
ABCF3-212ENST00000478288 IFT57Q9NWB7 429 aa16.88■□□□□ 0.29
ABCF3-212ENST00000478288 ABT1Q9ULW3 272 aaKnown RBP16.88■□□□□ 0.29
ABCF3-212ENST00000478288 MAP2K1Q02750 393 aaPredicted RBP16.87■□□□□ 0.29
ABCF3-212ENST00000478288 ZC3H15Q8WU90 426 aaKnown RBP16.87■□□□□ 0.29
ABCF3-212ENST00000478288 MBIPQ9NS73 344 aa16.87■□□□□ 0.29
ABCF3-212ENST00000478288 PGAP2Q9UHJ9 254 aa16.87■□□□□ 0.29
ABCF3-212ENST00000478288 WDR33Q9C0J8 1336 aaKnown RBP16.87■□□□□ 0.29
ABCF3-212ENST00000478288 GMPSP49915 693 aaPredicted RBP16.86■□□□□ 0.29
ABCF3-212ENST00000478288 HSP90B1P14625 803 aaKnown RBP16.85■□□□□ 0.29
ABCF3-212ENST00000478288 ECE1P42892 770 aa16.85■□□□□ 0.29
ABCF3-212ENST00000478288 FAM89AQ96GI7 184 aa16.85■□□□□ 0.29
ABCF3-212ENST00000478288 CHMP4AQ9BY43 222 aa16.85■□□□□ 0.29
ABCF3-212ENST00000478288 TLL2Q9Y6L7 1015 aa16.85■□□□□ 0.29
ABCF3-212ENST00000478288 GNAI1P63096 354 aa16.84■□□□□ 0.29
ABCF3-212ENST00000478288 CST9Q5W186 159 aa16.84■□□□□ 0.29
ABCF3-212ENST00000478288 HHIPL1Q96JK4 782 aa16.84■□□□□ 0.29
ABCF3-212ENST00000478288 YDJCA8MPS7 323 aa16.83■□□□□ 0.28
ABCF3-212ENST00000478288 ATP5J2-PTCD1G3V325 749 aa16.83■□□□□ 0.28
ABCF3-212ENST00000478288 TRAF5O00463 557 aa16.83■□□□□ 0.28
ABCF3-212ENST00000478288 CAPN15O75808 1086 aa16.83■□□□□ 0.28
ABCF3-212ENST00000478288 RAD17O75943 681 aa16.83■□□□□ 0.28
ABCF3-212ENST00000478288 GOLGA2Q08379 1002 aa16.83■□□□□ 0.28
ABCF3-212ENST00000478288 ZBTB38Q8NAP3 1195 aaPredicted RBP16.83■□□□□ 0.28
ABCF3-212ENST00000478288 DPF2Q92785 391 aa16.83■□□□□ 0.28
ABCF3-212ENST00000478288 CELF1Q92879 486 aaKnown RBP16.83■□□□□ 0.28
ABCF3-212ENST00000478288 BCL2L13Q9BXK5 485 aa16.83■□□□□ 0.28
ABCF3-212ENST00000478288 COL4A1P02462 1669 aa16.82■□□□□ 0.28
ABCF3-212ENST00000478288 IRS4O14654 1257 aaPredicted RBP16.82■□□□□ 0.28
ABCF3-212ENST00000478288 WASHC4Q2M389 1173 aa16.82■□□□□ 0.28
ABCF3-212ENST00000478288 CAPNS2Q96L46 248 aa16.82■□□□□ 0.28
ABCF3-212ENST00000478288 POLR2AP24928 1970 aaKnown RBP16.82■□□□□ 0.28
ABCF3-212ENST00000478288 PSME4Q14997 1843 aa16.82■□□□□ 0.28
ABCF3-212ENST00000478288 SCN9AQ15858 1988 aa16.81■□□□□ 0.28
ABCF3-212ENST00000478288 MYH3P11055 1940 aa16.81■□□□□ 0.28
ABCF3-212ENST00000478288 APAF1O14727 1248 aa16.81■□□□□ 0.28
ABCF3-212ENST00000478288 RIC3Q7Z5B4 369 aa16.81■□□□□ 0.28
ABCF3-212ENST00000478288 SAPCD2Q86UD0 394 aa16.81■□□□□ 0.28
ABCF3-212ENST00000478288 CCDC191Q8NCU4 936 aa16.81■□□□□ 0.28
ABCF3-212ENST00000478288 EYA3Q99504 573 aa16.81■□□□□ 0.28
ABCF3-212ENST00000478288 PODXL2Q9NZ53 605 aa16.81■□□□□ 0.28
ABCF3-212ENST00000478288 NSFL1CQ9UNZ2 370 aaKnown RBP16.81■□□□□ 0.28
ABCF3-212ENST00000478288 ZNF609O15014 1411 aa16.8■□□□□ 0.28
ABCF3-212ENST00000478288 H7C1D1 291 aa16.8■□□□□ 0.28
ABCF3-212ENST00000478288 HSPA8P11142 646 aaKnown RBP16.8■□□□□ 0.28
ABCF3-212ENST00000478288 RPS12P25398 132 aaKnown RBP16.8■□□□□ 0.28
ABCF3-212ENST00000478288 MAP2K2P36507 400 aa16.8■□□□□ 0.28
ABCF3-212ENST00000478288 LBX1P52954 281 aa16.8■□□□□ 0.28
ABCF3-212ENST00000478288 HIRAP54198 1017 aaPredicted RBP16.8■□□□□ 0.28
ABCF3-212ENST00000478288 RPS8P62241 208 aaKnown RBP16.8■□□□□ 0.28
ABCF3-212ENST00000478288 FMR1Q06787 632 aaKnown RBP eCLIP16.8■□□□□ 0.28
ABCF3-212ENST00000478288 CDC37L1Q7L3B6 337 aa16.8■□□□□ 0.28
ABCF3-212ENST00000478288 CNOT7Q9UIV1 285 aaKnown RBP16.8■□□□□ 0.28
ABCF3-212ENST00000478288 CACNA1FO60840 1977 aa16.79■□□□□ 0.28
ABCF3-212ENST00000478288 CELF2O95319 508 aaKnown RBP16.79■□□□□ 0.28
ABCF3-212ENST00000478288 GPSM2P81274 684 aa16.79■□□□□ 0.28
ABCF3-212ENST00000478288 CYP4F22Q6NT55 531 aa16.79■□□□□ 0.28
ABCF3-212ENST00000478288 MICALL2Q8IY33 904 aa16.79■□□□□ 0.28
ABCF3-212ENST00000478288 TRPM4Q8TD43 1214 aa16.79■□□□□ 0.28
ABCF3-212ENST00000478288 GPR101Q96P66 508 aaPredicted RBP16.79■□□□□ 0.28
ABCF3-212ENST00000478288 POLLQ9UGP5 575 aa16.79■□□□□ 0.28
ABCF3-212ENST00000478288 PSMD14O00487 310 aa16.78■□□□□ 0.28
ABCF3-212ENST00000478288 PCCAP05165 728 aaPredicted RBP16.78■□□□□ 0.28
ABCF3-212ENST00000478288 CCDC30Q5VVM6 783 aa16.78■□□□□ 0.28
ABCF3-212ENST00000478288 TBC1D16Q8TBP0 767 aa16.78■□□□□ 0.28
ABCF3-212ENST00000478288 GLIS2Q9BZE0 524 aaPredicted RBP16.78■□□□□ 0.28
ABCF3-212ENST00000478288 PHAXQ9H814 394 aaKnown RBP16.78■□□□□ 0.28
ABCF3-212ENST00000478288 C6orf229H3BNL8 230 aa16.77■□□□□ 0.28
ABCF3-212ENST00000478288 DDX58O95786 925 aaKnown RBP16.77■□□□□ 0.28
ABCF3-212ENST00000478288 CCDC152Q4G0S7 254 aa16.77■□□□□ 0.28
ABCF3-212ENST00000478288 RTL5Q5HYW3 569 aaPredicted RBP16.77■□□□□ 0.28
ABCF3-212ENST00000478288 PAXIP1Q6ZW49 1069 aaPredicted RBP16.77■□□□□ 0.28
ABCF3-212ENST00000478288 ZNF428Q96B54 188 aa16.77■□□□□ 0.28
ABCF3-212ENST00000478288 BEGAINQ9BUH8 593 aa16.77■□□□□ 0.28
ABCF3-212ENST00000478288 METTL22Q9BUU2 404 aaPredicted RBP16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 256.6 ms