RNA–Protein interactions for RNA: ENST00000477949.1

USP33-208, Transcript of ubiquitin specific peptidase 33, humanhuman

TSL 2

Gene USP33, Length 663 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP33-208ENST00000477949 PRDM11Q9NQV5 511 aa9.87□□□□□ -0.83
USP33-208ENST00000477949 SPATA31E1Q6ZUB1 1445 aa9.87□□□□□ -0.83
USP33-208ENST00000477949 LRRC37A3O60309 1634 aa9.86□□□□□ -0.83
USP33-208ENST00000477949 NANOS1Q8WY41 292 aaKnown RBP9.86□□□□□ -0.83
USP33-208ENST00000477949 ATP7BP35670 1465 aa9.85□□□□□ -0.83
USP33-208ENST00000477949 PRR36Q9H6K5 1346 aa9.85□□□□□ -0.83
USP33-208ENST00000477949 OVOS2A0A0G2JMS6 1433 aa9.85□□□□□ -0.83
USP33-208ENST00000477949 OVOS2A0A0J9YW53 1432 aa9.85□□□□□ -0.83
USP33-208ENST00000477949 OVOS2Q6IE36 1432 aa9.85□□□□□ -0.83
USP33-208ENST00000477949 LOC105371045A0A1W2PR82 267 aa9.85□□□□□ -0.83
USP33-208ENST00000477949 AP1G2O75843 785 aa9.85□□□□□ -0.83
USP33-208ENST00000477949 PDE3BQ13370 1112 aa9.85□□□□□ -0.83
USP33-208ENST00000477949 CHRNA2Q15822 529 aa9.85□□□□□ -0.83
USP33-208ENST00000477949 INTS6LQ5JSJ4 861 aaKnown RBP9.85□□□□□ -0.83
USP33-208ENST00000477949 CCDC155Q8N6L0 562 aa9.85□□□□□ -0.83
USP33-208ENST00000477949 OCSTAMPQ9BR26 566 aa9.85□□□□□ -0.83
USP33-208ENST00000477949 FAM117AQ9C073 453 aa9.85□□□□□ -0.83
USP33-208ENST00000477949 KDM4CQ9H3R0 1056 aa9.85□□□□□ -0.83
USP33-208ENST00000477949 PAPPAQ13219 1627 aa9.85□□□□□ -0.83
USP33-208ENST00000477949 PNMA1Q8ND90 353 aa9.84□□□□□ -0.83
USP33-208ENST00000477949 ADAM32Q8TC27 787 aa9.84□□□□□ -0.83
USP33-208ENST00000477949 CNTNAP3BQ96NU0 1288 aa9.84□□□□□ -0.83
USP33-208ENST00000477949 CNTNAP3Q9BZ76 1288 aa9.84□□□□□ -0.83
USP33-208ENST00000477949 STRN4Q9NRL3 753 aa9.84□□□□□ -0.83
USP33-208ENST00000477949 DHX57Q6P158 1386 aaKnown RBP9.84□□□□□ -0.83
USP33-208ENST00000477949 COL24A1Q17RW2 1714 aa9.84□□□□□ -0.83
USP33-208ENST00000477949 TULP4Q9NRJ4 1543 aa9.83□□□□□ -0.84
USP33-208ENST00000477949 SLC35F4A4IF30 521 aa9.83□□□□□ -0.84
USP33-208ENST00000477949 KRT76Q01546 638 aa9.83□□□□□ -0.84
USP33-208ENST00000477949 KCNMA1Q12791 1236 aa9.83□□□□□ -0.84
USP33-208ENST00000477949 AGBL1Q96MI9 1066 aa9.83□□□□□ -0.84
USP33-208ENST00000477949 MTFR1LQ9H019 292 aa9.83□□□□□ -0.84
USP33-208ENST00000477949 GPBP1L1Q9HC44 474 aaPredicted RBP9.83□□□□□ -0.84
USP33-208ENST00000477949 USP35Q9P2H5 1018 aa9.83□□□□□ -0.84
USP33-208ENST00000477949 GOLGB1Q14789 3259 aaKnown RBP9.83□□□□□ -0.84
USP33-208ENST00000477949 BCL9O00512 1426 aa9.82□□□□□ -0.84
USP33-208ENST00000477949 RELBQ01201 579 aa9.82□□□□□ -0.84
USP33-208ENST00000477949 COL13A1Q5TAT6 717 aaPredicted RBP9.82□□□□□ -0.84
USP33-208ENST00000477949 LARP1Q6PKG0 1096 aaKnown RBP9.82□□□□□ -0.84
USP33-208ENST00000477949 TCP11L2Q8N4U5 519 aa9.82□□□□□ -0.84
USP33-208ENST00000477949 GPRASP1Q5JY77 1395 aa9.82□□□□□ -0.84
USP33-208ENST00000477949 AATKQ6ZMQ8 1374 aa9.82□□□□□ -0.84
USP33-208ENST00000477949 ANKRD30BQ9BXX2 1392 aa9.82□□□□□ -0.84
USP33-208ENST00000477949 CTSOP43234 321 aaPredicted RBP9.81□□□□□ -0.84
USP33-208ENST00000477949 NBPF20Q3BBV1 942 aa9.81□□□□□ -0.84
USP33-208ENST00000477949 COL25A1Q9BXS0 654 aaPredicted RBP9.81□□□□□ -0.84
USP33-208ENST00000477949 WNK3Q9BYP7 1800 aa9.81□□□□□ -0.84
USP33-208ENST00000477949 COL5A2P05997 1499 aaPredicted RBP9.8□□□□□ -0.84
USP33-208ENST00000477949 CPDO75976 1380 aa9.8□□□□□ -0.84
USP33-208ENST00000477949 HSPA6P17066 643 aa9.8□□□□□ -0.84
USP33-208ENST00000477949 SLC15A2Q16348 729 aa9.8□□□□□ -0.84
USP33-208ENST00000477949 ARXQ96QS3 562 aa9.8□□□□□ -0.84
USP33-208ENST00000477949 INSM2Q96T92 566 aaPredicted RBP9.8□□□□□ -0.84
USP33-208ENST00000477949 THRAP3Q9Y2W1 955 aaKnown RBP9.8□□□□□ -0.84
USP33-208ENST00000477949 ZC3H6P61129 1189 aaKnown RBP9.79□□□□□ -0.84
USP33-208ENST00000477949 DZIP3Q86Y13 1208 aaKnown RBP9.79□□□□□ -0.84
USP33-208ENST00000477949 VWA5B2Q8N398 1253 aa9.79□□□□□ -0.84
USP33-208ENST00000477949 EPS8L1Q8TE68 723 aa9.79□□□□□ -0.84
USP33-208ENST00000477949 PRAM1Q96QH2 718 aa9.79□□□□□ -0.84
USP33-208ENST00000477949 POLMQ9NP87 494 aaPredicted RBP9.79□□□□□ -0.84
USP33-208ENST00000477949 ADGRB1O14514 1584 aa9.79□□□□□ -0.84
USP33-208ENST00000477949 ADCY9O60503 1353 aa9.78□□□□□ -0.84
USP33-208ENST00000477949 ITGA6P23229 1130 aa9.78□□□□□ -0.84
USP33-208ENST00000477949 SAFB2Q14151 953 aaKnown RBP eCLIP9.78□□□□□ -0.84
USP33-208ENST00000477949 SV2AQ7L0J3 742 aa9.78□□□□□ -0.84
USP33-208ENST00000477949 ZNF395Q9H8N7 513 aaPredicted RBP9.78□□□□□ -0.84
USP33-208ENST00000477949 C14orf93Q9H972 538 aaKnown RBP9.78□□□□□ -0.84
USP33-208ENST00000477949 TMPRSS4Q9NRS4 437 aa9.78□□□□□ -0.84
USP33-208ENST00000477949 ADAMTS8Q9UP79 889 aa9.78□□□□□ -0.84
USP33-208ENST00000477949 ATP10DQ9P241 1426 aa9.78□□□□□ -0.84
USP33-208ENST00000477949 USP19O94966 1318 aa9.78□□□□□ -0.84
USP33-208ENST00000477949 CRB1P82279 1406 aa9.77□□□□□ -0.85
USP33-208ENST00000477949 TXNRD1Q16881 649 aa9.77□□□□□ -0.85
USP33-208ENST00000477949 STK32BQ9NY57 414 aa9.77□□□□□ -0.85
USP33-208ENST00000477949 AKAP12Q02952 1782 aa9.77□□□□□ -0.85
USP33-208ENST00000477949 ERVH48-1M5A8F1 160 aa9.76□□□□□ -0.85
USP33-208ENST00000477949 ADH1AP07327 375 aa9.76□□□□□ -0.85
USP33-208ENST00000477949 USP17L8P0C7I0 530 aa9.76□□□□□ -0.85
USP33-208ENST00000477949 ADD1P35611 737 aaKnown RBP9.76□□□□□ -0.85
USP33-208ENST00000477949 GSK3AP49840 483 aa9.76□□□□□ -0.85
USP33-208ENST00000477949 RAB15P59190 212 aa9.76□□□□□ -0.85
USP33-208ENST00000477949 GPR162Q16538 588 aa9.76□□□□□ -0.85
USP33-208ENST00000477949 HMX1Q9NP08 348 aaPredicted RBP9.76□□□□□ -0.85
USP33-208ENST00000477949 TOPAZ1Q8N9V7 1692 aa9.76□□□□□ -0.85
USP33-208ENST00000477949 ITSN1Q15811 1721 aa9.76□□□□□ -0.85
USP33-208ENST00000477949 QSER1Q2KHR3 1735 aa9.76□□□□□ -0.85
USP33-208ENST00000477949 LILRA1O75019 489 aa9.75□□□□□ -0.85
USP33-208ENST00000477949 YBX3P16989 372 aaKnown RBP eCLIP9.75□□□□□ -0.85
USP33-208ENST00000477949 ITGAEP38570 1179 aa9.75□□□□□ -0.85
USP33-208ENST00000477949 PTGIRP43119 386 aa9.75□□□□□ -0.85
USP33-208ENST00000477949 RNFT1Q5M7Z0 435 aa9.75□□□□□ -0.85
USP33-208ENST00000477949 CFAP70Q5T0N1 1121 aa9.75□□□□□ -0.85
USP33-208ENST00000477949 TNS4Q8IZW8 715 aa9.75□□□□□ -0.85
USP33-208ENST00000477949 MARCH10Q8NA82 808 aaPredicted RBP9.75□□□□□ -0.85
USP33-208ENST00000477949 RNF217Q8TC41 542 aa9.75□□□□□ -0.85
USP33-208ENST00000477949 EIF3AQ14152 1382 aaKnown RBP9.75□□□□□ -0.85
USP33-208ENST00000477949 NHSQ6T4R5 1651 aa9.74□□□□□ -0.85
USP33-208ENST00000477949 COL18A1P39060 1754 aa9.74□□□□□ -0.85
USP33-208ENST00000477949 CDC14CA4D256 554 aa9.74□□□□□ -0.85
USP33-208ENST00000477949 ESPNB1AK53 854 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms