RNA–Protein interactions for RNA: ENST00000477639.5

TMED4-204, Transcript of transmembrane p24 trafficking protein 4, humanhuman

TSL 2

Gene TMED4, Length 1,950 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED4-204ENST00000477639 SLIT2O94813 1529 aa24.76■■□□□ 1.55
TMED4-204ENST00000477639 PARP4Q9UKK3 1724 aaKnown RBP24.76■■□□□ 1.55
TMED4-204ENST00000477639 ARFGEF2Q9Y6D5 1785 aa24.76■■□□□ 1.55
TMED4-204ENST00000477639 UBE3BQ7Z3V4 1068 aa24.76■■□□□ 1.55
TMED4-204ENST00000477639 PLBD2Q8NHP8 589 aa24.76■■□□□ 1.55
TMED4-204ENST00000477639 ATP5JP18859 108 aa24.75■■□□□ 1.55
TMED4-204ENST00000477639 AFDNP55196 1824 aaKnown RBP24.75■■□□□ 1.55
TMED4-204ENST00000477639 ST3GAL1Q11201 340 aa24.74■■□□□ 1.55
TMED4-204ENST00000477639 TFCP2Q12800 502 aa24.74■■□□□ 1.55
TMED4-204ENST00000477639 TNNI3KQ59H18 835 aa24.74■■□□□ 1.55
TMED4-204ENST00000477639 CCDC83Q8IWF9 413 aa24.74■■□□□ 1.55
TMED4-204ENST00000477639 PDLIM2Q96JY6 352 aa24.74■■□□□ 1.55
TMED4-204ENST00000477639 FPGT-TNNI3KV9GXZ4 949 aa24.74■■□□□ 1.55
TMED4-204ENST00000477639 LAMB4A4D0S4 1761 aa24.74■■□□□ 1.55
TMED4-204ENST00000477639 ATP5J2-PTCD1G3V325 749 aa24.74■■□□□ 1.55
TMED4-204ENST00000477639 PTCD1O75127 700 aaKnown RBP24.74■■□□□ 1.55
TMED4-204ENST00000477639 SYAP1Q96A49 352 aaPredicted RBP24.74■■□□□ 1.55
TMED4-204ENST00000477639 DBNLQ9UJU6 430 aaKnown RBP24.74■■□□□ 1.55
TMED4-204ENST00000477639 A0A087WZG4 1122 aa24.73■■□□□ 1.55
TMED4-204ENST00000477639 F13A1P00488 732 aa24.73■■□□□ 1.55
TMED4-204ENST00000477639 KCNJ4P48050 445 aa24.73■■□□□ 1.55
TMED4-204ENST00000477639 BTG4Q9NY30 223 aa24.73■■□□□ 1.55
TMED4-204ENST00000477639 COL14A1Q05707 1796 aaKnown RBP24.73■■□□□ 1.55
TMED4-204ENST00000477639 GJB2P29033 226 aa24.73■■□□□ 1.55
TMED4-204ENST00000477639 RBM6P78332 1123 aaKnown RBP24.73■■□□□ 1.55
TMED4-204ENST00000477639 DDX54Q8TDD1 881 aaKnown RBP24.73■■□□□ 1.55
TMED4-204ENST00000477639 ATRNO75882 1429 aa24.72■■□□□ 1.55
TMED4-204ENST00000477639 NBPF26B4DH59 902 aa24.72■■□□□ 1.55
TMED4-204ENST00000477639 PSMA5P28066 241 aa24.72■■□□□ 1.55
TMED4-204ENST00000477639 ME3Q16798 604 aa24.72■■□□□ 1.55
TMED4-204ENST00000477639 NBPF14Q5TI25 921 aa24.72■■□□□ 1.55
TMED4-204ENST00000477639 NBPF10Q6P3W6 841 aaKnown RBP24.72■■□□□ 1.55
TMED4-204ENST00000477639 NBPF15Q8N660 670 aa24.72■■□□□ 1.55
TMED4-204ENST00000477639 CNPY2Q9Y2B0 182 aa24.72■■□□□ 1.55
TMED4-204ENST00000477639 ALDH8A1Q9H2A2 487 aaPredicted RBP24.71■■□□□ 1.55
TMED4-204ENST00000477639 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.71■■□□□ 1.55
TMED4-204ENST00000477639 NWD2Q9ULI1 1742 aa24.71■■□□□ 1.55
TMED4-204ENST00000477639 ZNF589Q86UQ0 364 aaPredicted RBP24.71■■□□□ 1.55
TMED4-204ENST00000477639 EDC3Q96F86 508 aaKnown RBP24.71■■□□□ 1.55
TMED4-204ENST00000477639 TPCN1Q9ULQ1 816 aa24.71■■□□□ 1.55
TMED4-204ENST00000477639 MTMR6Q9Y217 621 aa24.71■■□□□ 1.55
TMED4-204ENST00000477639 H7C1W4 665 aa24.7■■□□□ 1.54
TMED4-204ENST00000477639 COL9A3Q14050 684 aaPredicted RBP24.7■■□□□ 1.54
TMED4-204ENST00000477639 TSGA10IPQ3SY00 556 aa24.7■■□□□ 1.54
TMED4-204ENST00000477639 CCDC9Q9Y3X0 531 aaKnown RBP24.7■■□□□ 1.54
TMED4-204ENST00000477639 SOCS7O14512 581 aa24.69■■□□□ 1.54
TMED4-204ENST00000477639 RNF20Q5VTR2 975 aa24.69■■□□□ 1.54
TMED4-204ENST00000477639 WDR17Q8IZU2 1322 aa24.69■■□□□ 1.54
TMED4-204ENST00000477639 TAF5LO75529 589 aa24.69■■□□□ 1.54
TMED4-204ENST00000477639 FOXO4P98177 505 aa24.69■■□□□ 1.54
TMED4-204ENST00000477639 HS1BP3Q53T59 392 aa24.69■■□□□ 1.54
TMED4-204ENST00000477639 ZSCAN30Q86W11 494 aa24.69■■□□□ 1.54
TMED4-204ENST00000477639 ZCRB1Q8TBF4 217 aaKnown RBP24.69■■□□□ 1.54
TMED4-204ENST00000477639 TSPY26PQ9H489 355 aa24.69■■□□□ 1.54
TMED4-204ENST00000477639 ATP6V1DQ9Y5K8 247 aa24.69■■□□□ 1.54
TMED4-204ENST00000477639 RFX7Q2KHR2 1363 aa24.68■■□□□ 1.54
TMED4-204ENST00000477639 USPL1Q5W0Q7 1092 aa24.68■■□□□ 1.54
TMED4-204ENST00000477639 TAF6LQ9Y6J9 622 aa24.68■■□□□ 1.54
TMED4-204ENST00000477639 TCHHQ07283 1943 aa24.68■■□□□ 1.54
TMED4-204ENST00000477639 PCDH11XQ9BZA7 1347 aa24.67■■□□□ 1.54
TMED4-204ENST00000477639 PCDH11YQ9BZA8 1340 aa24.67■■□□□ 1.54
TMED4-204ENST00000477639 ERVV-2B6SEH9 535 aa24.67■■□□□ 1.54
TMED4-204ENST00000477639 LMBR1LQ6UX01 489 aa24.67■■□□□ 1.54
TMED4-204ENST00000477639 NECAB1Q8N987 351 aa24.67■■□□□ 1.54
TMED4-204ENST00000477639 DBNDD2Q9BQY9 259 aa24.67■■□□□ 1.54
TMED4-204ENST00000477639 HMG20BQ9P0W2 317 aa24.67■■□□□ 1.54
TMED4-204ENST00000477639 PHF14O94880 888 aa24.67■■□□□ 1.54
TMED4-204ENST00000477639 RPS6KB1P23443 525 aa24.67■■□□□ 1.54
TMED4-204ENST00000477639 BLOC1S2Q6QNY1 142 aa24.67■■□□□ 1.54
TMED4-204ENST00000477639 GJD4Q96KN9 370 aaPredicted RBP24.67■■□□□ 1.54
TMED4-204ENST00000477639 HAUS7Q99871 368 aa24.66■■□□□ 1.54
TMED4-204ENST00000477639 NRAPQ86VF7 1730 aa24.66■■□□□ 1.54
TMED4-204ENST00000477639 UBE2HP62256 183 aa24.65■■□□□ 1.54
TMED4-204ENST00000477639 NKX1-1Q15270 411 aaPredicted RBP24.65■■□□□ 1.54
TMED4-204ENST00000477639 ANKRD1Q15327 319 aa24.65■■□□□ 1.54
TMED4-204ENST00000477639 UBR2Q8IWV8 1755 aa24.65■■□□□ 1.54
TMED4-204ENST00000477639 DTNBO60941 627 aa24.65■■□□□ 1.54
TMED4-204ENST00000477639 TTLL7Q6ZT98 887 aa24.65■■□□□ 1.54
TMED4-204ENST00000477639 STRN4Q9NRL3 753 aa24.65■■□□□ 1.54
TMED4-204ENST00000477639 KCPQ6ZWJ8 1503 aa24.64■■□□□ 1.54
TMED4-204ENST00000477639 TOB2Q14106 344 aaPredicted RBP24.63■■□□□ 1.53
TMED4-204ENST00000477639 VPS72Q15906 364 aa24.63■■□□□ 1.53
TMED4-204ENST00000477639 CCDC183Q5T5S1 534 aa24.63■■□□□ 1.53
TMED4-204ENST00000477639 TOM1L2Q6ZVM7 507 aa24.63■■□□□ 1.53
TMED4-204ENST00000477639 NUP188Q5SRE5 1749 aa24.63■■□□□ 1.53
TMED4-204ENST00000477639 ZNF609O15014 1411 aa24.63■■□□□ 1.53
TMED4-204ENST00000477639 ATG9AQ7Z3C6 839 aa24.63■■□□□ 1.53
TMED4-204ENST00000477639 CWC25Q9NXE8 425 aaPredicted RBP24.63■■□□□ 1.53
TMED4-204ENST00000477639 NDUFB9Q9Y6M9 179 aa24.63■■□□□ 1.53
TMED4-204ENST00000477639 A1BGP04217 495 aa24.62■■□□□ 1.53
TMED4-204ENST00000477639 PDIA4P13667 645 aaKnown RBP24.62■■□□□ 1.53
TMED4-204ENST00000477639 DNM1Q05193 864 aaKnown RBP24.62■■□□□ 1.53
TMED4-204ENST00000477639 RNF214Q8ND24 703 aa24.62■■□□□ 1.53
TMED4-204ENST00000477639 COL5A2P05997 1499 aaPredicted RBP24.61■■□□□ 1.53
TMED4-204ENST00000477639 PAPPAQ13219 1627 aa24.61■■□□□ 1.53
TMED4-204ENST00000477639 TCEANC2Q96MN5 208 aa24.61■■□□□ 1.53
TMED4-204ENST00000477639 DNAJC2Q99543 621 aaKnown RBP24.61■■□□□ 1.53
TMED4-204ENST00000477639 FIBPO43427 364 aa24.6■■□□□ 1.53
TMED4-204ENST00000477639 EVA1CP58658 441 aa24.6■■□□□ 1.53
TMED4-204ENST00000477639 KRT32Q14532 448 aa24.6■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms