RNA–Protein interactions for RNA: ENST00000476413.1

VPS50-212, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 381 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-212ENST00000476413 SORBS3O60504 671 aa9.81□□□□□ -0.84
VPS50-212ENST00000476413 IRS1P35568 1242 aa9.81□□□□□ -0.84
VPS50-212ENST00000476413 PSMD2Q13200 908 aa9.81□□□□□ -0.84
VPS50-212ENST00000476413 NLRP13Q86W25 1043 aa9.81□□□□□ -0.84
VPS50-212ENST00000476413 C1orf127Q8N9H9 656 aa9.81□□□□□ -0.84
VPS50-212ENST00000476413 CCDC74AQ96AQ1 378 aa9.81□□□□□ -0.84
VPS50-212ENST00000476413 GSX2Q9BZM3 304 aa9.81□□□□□ -0.84
VPS50-212ENST00000476413 BNIP3LO60238 219 aa9.8□□□□□ -0.84
VPS50-212ENST00000476413 PHACTR2O75167 634 aa9.8□□□□□ -0.84
VPS50-212ENST00000476413 TRIM22Q8IYM9 498 aa9.8□□□□□ -0.84
VPS50-212ENST00000476413 ZNF837Q96EG3 531 aaPredicted RBP9.8□□□□□ -0.84
VPS50-212ENST00000476413 ABI2Q9NYB9 513 aaPredicted RBP9.8□□□□□ -0.84
VPS50-212ENST00000476413 GMPR2Q9P2T1 348 aaKnown RBP9.8□□□□□ -0.84
VPS50-212ENST00000476413 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.8□□□□□ -0.84
VPS50-212ENST00000476413 LCE2BO14633 110 aa9.79□□□□□ -0.84
VPS50-212ENST00000476413 EREGO14944 169 aa9.79□□□□□ -0.84
VPS50-212ENST00000476413 CTSHP09668 335 aa9.79□□□□□ -0.84
VPS50-212ENST00000476413 MAPTP10636 758 aaKnown RBP9.79□□□□□ -0.84
VPS50-212ENST00000476413 VEGFBP49765 207 aa9.79□□□□□ -0.84
VPS50-212ENST00000476413 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.79□□□□□ -0.84
VPS50-212ENST00000476413 EPS8L3Q8TE67 593 aaKnown RBP9.79□□□□□ -0.84
VPS50-212ENST00000476413 KIFC2Q96AC6 838 aa9.79□□□□□ -0.84
VPS50-212ENST00000476413 SENP2Q9HC62 589 aa9.79□□□□□ -0.84
VPS50-212ENST00000476413 ZFATQ9P243 1243 aa9.79□□□□□ -0.84
VPS50-212ENST00000476413 KHNYNO15037 678 aaKnown RBP9.78□□□□□ -0.84
VPS50-212ENST00000476413 SASH3O75995 380 aa9.78□□□□□ -0.84
VPS50-212ENST00000476413 POLR3DP05423 398 aaPredicted RBP9.78□□□□□ -0.84
VPS50-212ENST00000476413 AK5Q9Y6K8 562 aa9.78□□□□□ -0.84
VPS50-212ENST00000476413 H7C1W4 665 aa9.77□□□□□ -0.85
VPS50-212ENST00000476413 CYP2E1P05181 493 aaPredicted RBP9.77□□□□□ -0.85
VPS50-212ENST00000476413 SNRPBP14678 240 aaKnown RBP9.77□□□□□ -0.85
VPS50-212ENST00000476413 ITGA6P23229 1130 aa9.77□□□□□ -0.85
VPS50-212ENST00000476413 TARSP26639 723 aaKnown RBP9.77□□□□□ -0.85
VPS50-212ENST00000476413 LAMC2Q13753 1193 aa9.77□□□□□ -0.85
VPS50-212ENST00000476413 CCINQ13939 588 aa9.77□□□□□ -0.85
VPS50-212ENST00000476413 GALNT12Q8IXK2 581 aa9.77□□□□□ -0.85
VPS50-212ENST00000476413 FRMD6Q96NE9 622 aa9.77□□□□□ -0.85
VPS50-212ENST00000476413 OSBPL7Q9BZF2 842 aa9.77□□□□□ -0.85
VPS50-212ENST00000476413 BCL11AQ9H165 835 aa9.77□□□□□ -0.85
VPS50-212ENST00000476413 MRS2Q9HD23 443 aa9.77□□□□□ -0.85
VPS50-212ENST00000476413 NPHS2Q9NP85 383 aa9.77□□□□□ -0.85
VPS50-212ENST00000476413 VTI1BQ9UEU0 232 aa9.77□□□□□ -0.85
VPS50-212ENST00000476413 HDLBPQ00341 1268 aaKnown RBP9.76□□□□□ -0.85
VPS50-212ENST00000476413 ABHD17AQ96GS6 310 aa9.76□□□□□ -0.85
VPS50-212ENST00000476413 SLC30A3Q99726 388 aa9.76□□□□□ -0.85
VPS50-212ENST00000476413 SCAMP3O14828 347 aaKnown RBP9.75□□□□□ -0.85
VPS50-212ENST00000476413 MMP20O60882 483 aa9.75□□□□□ -0.85
VPS50-212ENST00000476413 KRT25Q7Z3Z0 450 aa9.75□□□□□ -0.85
VPS50-212ENST00000476413 OR13H1Q8NG92 308 aa9.75□□□□□ -0.85
VPS50-212ENST00000476413 GMCL1Q96IK5 515 aa9.75□□□□□ -0.85
VPS50-212ENST00000476413 SPG7Q9UQ90 795 aa9.75□□□□□ -0.85
VPS50-212ENST00000476413 METTL16Q86W50 562 aaKnown RBP9.74□□□□□ -0.85
VPS50-212ENST00000476413 C12orf49Q9H741 205 aa9.74□□□□□ -0.85
VPS50-212ENST00000476413 MARK1Q9P0L2 795 aa9.74□□□□□ -0.85
VPS50-212ENST00000476413 CD33P20138 364 aa9.73□□□□□ -0.85
VPS50-212ENST00000476413 FANCCQ00597 558 aa9.73□□□□□ -0.85
VPS50-212ENST00000476413 SPEM2Q0P670 501 aa9.73□□□□□ -0.85
VPS50-212ENST00000476413 TTC39BQ5VTQ0 682 aaPredicted RBP9.73□□□□□ -0.85
VPS50-212ENST00000476413 PEAR1Q5VY43 1037 aaPredicted RBP9.73□□□□□ -0.85
VPS50-212ENST00000476413 TMEM87AQ8NBN3 555 aa9.73□□□□□ -0.85
VPS50-212ENST00000476413 GTPBP3Q969Y2 492 aaKnown RBP9.73□□□□□ -0.85
VPS50-212ENST00000476413 CRELD1Q96HD1 420 aa9.73□□□□□ -0.85
VPS50-212ENST00000476413 KANSL3Q9P2N6 904 aa9.73□□□□□ -0.85
VPS50-212ENST00000476413 ATXN7L1Q9ULK2 861 aaPredicted RBP9.73□□□□□ -0.85
VPS50-212ENST00000476413 RARAP10276 462 aa9.72□□□□□ -0.85
VPS50-212ENST00000476413 NFKB1P19838 968 aa9.72□□□□□ -0.85
VPS50-212ENST00000476413 CES1P23141 567 aa9.72□□□□□ -0.85
VPS50-212ENST00000476413 RAD51AP2Q09MP3 1159 aa9.72□□□□□ -0.85
VPS50-212ENST00000476413 LATS2Q9NRM7 1088 aa9.72□□□□□ -0.85
VPS50-212ENST00000476413 SALL4Q9UJQ4 1053 aa9.72□□□□□ -0.85
VPS50-212ENST00000476413 GIPC1O14908 333 aa9.71□□□□□ -0.86
VPS50-212ENST00000476413 HOXD8P13378 290 aaPredicted RBP9.71□□□□□ -0.86
VPS50-212ENST00000476413 EIF4BP23588 611 aaKnown RBP9.71□□□□□ -0.86
VPS50-212ENST00000476413 ITGAEP38570 1179 aa9.71□□□□□ -0.86
VPS50-212ENST00000476413 COL13A1Q5TAT6 717 aaPredicted RBP9.71□□□□□ -0.86
VPS50-212ENST00000476413 RAB44Q7Z6P3 723 aaPredicted RBP9.71□□□□□ -0.86
VPS50-212ENST00000476413 GLIS3Q8NEA6 775 aa9.71□□□□□ -0.86
VPS50-212ENST00000476413 PMEPA1Q969W9 287 aa9.71□□□□□ -0.86
VPS50-212ENST00000476413 NLRP2Q9NX02 1062 aa9.71□□□□□ -0.86
VPS50-212ENST00000476413 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.71□□□□□ -0.86
VPS50-212ENST00000476413 IGSF3O75054 1194 aa9.7□□□□□ -0.86
VPS50-212ENST00000476413 PPFIA3O75145 1194 aa9.7□□□□□ -0.86
VPS50-212ENST00000476413 MAP3K6O95382 1288 aa9.7□□□□□ -0.86
VPS50-212ENST00000476413 GRM2Q14416 872 aa9.7□□□□□ -0.86
VPS50-212ENST00000476413 FAM182BQ5T319 152 aa9.7□□□□□ -0.86
VPS50-212ENST00000476413 C9orf131Q5VYM1 1079 aa9.7□□□□□ -0.86
VPS50-212ENST00000476413 NXPE4Q6UWF7 544 aa9.7□□□□□ -0.86
VPS50-212ENST00000476413 BCO2Q9BYV7 579 aa9.7□□□□□ -0.86
VPS50-212ENST00000476413 SUV39H2Q9H5I1 410 aa9.7□□□□□ -0.86
VPS50-212ENST00000476413 EFCC1Q9HA90 598 aa9.7□□□□□ -0.86
VPS50-212ENST00000476413 METTL5Q9NRN9 209 aaKnown RBP9.7□□□□□ -0.86
VPS50-212ENST00000476413 TLR7Q9NYK1 1049 aaKnown RBP9.7□□□□□ -0.86
VPS50-212ENST00000476413 A0A1W2PP55 124 aa9.69□□□□□ -0.86
VPS50-212ENST00000476413 KIF4AO95239 1232 aa9.69□□□□□ -0.86
VPS50-212ENST00000476413 FGFR3P22607 806 aa9.69□□□□□ -0.86
VPS50-212ENST00000476413 SOX18P35713 384 aa9.69□□□□□ -0.86
VPS50-212ENST00000476413 KIAA0319Q5VV43 1072 aa9.69□□□□□ -0.86
VPS50-212ENST00000476413 GPR25O00155 361 aa9.68□□□□□ -0.86
VPS50-212ENST00000476413 CTBSQ01459 385 aa9.68□□□□□ -0.86
VPS50-212ENST00000476413 BHMTQ93088 406 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms