RNA–Protein interactions for RNA: ENST00000473797.1

GPCPD1-204, Transcript of glycerophosphocholine phosphodiesterase 1, humanhuman

TSL 5

Gene GPCPD1, Length 342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1-204ENST00000473797 IFT43Q96FT9 208 aa8.18□□□□□ -1.1
GPCPD1-204ENST00000473797 IGFLR1Q9H665 355 aa8.18□□□□□ -1.1
GPCPD1-204ENST00000473797 RGS9O75916 674 aaPredicted RBP8.17□□□□□ -1.1
GPCPD1-204ENST00000473797 SRPK2P78362 688 aaKnown RBP8.17□□□□□ -1.1
GPCPD1-204ENST00000473797 TBC1D8BQ0IIM8 1120 aa8.17□□□□□ -1.1
GPCPD1-204ENST00000473797 DHX32Q7L7V1 743 aaKnown RBP8.17□□□□□ -1.1
GPCPD1-204ENST00000473797 VTI1AQ96AJ9 217 aa8.17□□□□□ -1.1
GPCPD1-204ENST00000473797 ACIN1Q9UKV3 1341 aaKnown RBP8.17□□□□□ -1.1
GPCPD1-204ENST00000473797 RFX1P22670 979 aa8.16□□□□□ -1.1
GPCPD1-204ENST00000473797 TARSP26639 723 aaKnown RBP8.16□□□□□ -1.1
GPCPD1-204ENST00000473797 RAC1P63000 192 aa8.16□□□□□ -1.1
GPCPD1-204ENST00000473797 GPLD1P80108 840 aa8.16□□□□□ -1.1
GPCPD1-204ENST00000473797 NRG1Q02297 640 aaPredicted RBP8.16□□□□□ -1.1
GPCPD1-204ENST00000473797 DTWD1Q8N5C7 304 aa8.16□□□□□ -1.1
GPCPD1-204ENST00000473797 LPIN3Q9BQK8 851 aa8.16□□□□□ -1.1
GPCPD1-204ENST00000473797 NOVA2Q9UNW9 492 aaKnown RBP8.16□□□□□ -1.1
GPCPD1-204ENST00000473797 FAM69CQ0P6D2 419 aa8.15□□□□□ -1.1
GPCPD1-204ENST00000473797 FKBP5Q13451 457 aaPredicted RBP8.15□□□□□ -1.1
GPCPD1-204ENST00000473797 MBTPS1Q14703 1052 aa8.15□□□□□ -1.1
GPCPD1-204ENST00000473797 MSL1Q68DK7 614 aa8.15□□□□□ -1.1
GPCPD1-204ENST00000473797 FAM35AQ86V20 835 aa8.15□□□□□ -1.1
GPCPD1-204ENST00000473797 FMR1NBQ8N0W7 255 aaPredicted RBP8.15□□□□□ -1.1
GPCPD1-204ENST00000473797 COL26A1Q96A83 441 aa8.15□□□□□ -1.1
GPCPD1-204ENST00000473797 RTCBQ9Y3I0 505 aaKnown RBP8.15□□□□□ -1.1
GPCPD1-204ENST00000473797 DYRK3O43781 588 aa8.14□□□□□ -1.11
GPCPD1-204ENST00000473797 SASH3O75995 380 aa8.14□□□□□ -1.11
GPCPD1-204ENST00000473797 NRLP54845 237 aa8.14□□□□□ -1.11
GPCPD1-204ENST00000473797 OCLNQ16625 522 aa8.14□□□□□ -1.11
GPCPD1-204ENST00000473797 CDCA8Q53HL2 280 aa8.14□□□□□ -1.11
GPCPD1-204ENST00000473797 COX20Q5RI15 118 aa8.14□□□□□ -1.11
GPCPD1-204ENST00000473797 PERM1Q5SV97 790 aa8.14□□□□□ -1.11
GPCPD1-204ENST00000473797 DMRTC2Q8IXT2 367 aaPredicted RBP8.14□□□□□ -1.11
GPCPD1-204ENST00000473797 H2AFB1P0C5Y9 115 aa8.13□□□□□ -1.11
GPCPD1-204ENST00000473797 H2AFB2P0C5Z0 115 aa8.13□□□□□ -1.11
GPCPD1-204ENST00000473797 RARAP10276 462 aa8.13□□□□□ -1.11
GPCPD1-204ENST00000473797 HOXD8P13378 290 aaPredicted RBP8.13□□□□□ -1.11
GPCPD1-204ENST00000473797 TXNRD3Q86VQ6 643 aa8.13□□□□□ -1.11
GPCPD1-204ENST00000473797 TLR7Q9NYK1 1049 aaKnown RBP8.13□□□□□ -1.11
GPCPD1-204ENST00000473797 ZMIZ1Q9ULJ6 1067 aa8.13□□□□□ -1.11
GPCPD1-204ENST00000473797 CPB1P15086 417 aa8.12□□□□□ -1.11
GPCPD1-204ENST00000473797 ARID4AP29374 1257 aaPredicted RBP8.12□□□□□ -1.11
GPCPD1-204ENST00000473797 KRT25Q7Z3Z0 450 aa8.12□□□□□ -1.11
GPCPD1-204ENST00000473797 FBXO11Q86XK2 927 aa8.12□□□□□ -1.11
GPCPD1-204ENST00000473797 TREML1Q86YW5 311 aa8.12□□□□□ -1.11
GPCPD1-204ENST00000473797 SSBP4Q9BWG4 385 aaPredicted RBP8.12□□□□□ -1.11
GPCPD1-204ENST00000473797 KCNMB2Q9Y691 235 aa8.12□□□□□ -1.11
GPCPD1-204ENST00000473797 ELMSAN1Q6PJG2 1045 aa8.11□□□□□ -1.11
GPCPD1-204ENST00000473797 SHISA2Q6UWI4 295 aa8.11□□□□□ -1.11
GPCPD1-204ENST00000473797 XYLBO75191 536 aa8.1□□□□□ -1.11
GPCPD1-204ENST00000473797 ATG7O95352 703 aa8.1□□□□□ -1.11
GPCPD1-204ENST00000473797 SOX18P35713 384 aa8.1□□□□□ -1.11
GPCPD1-204ENST00000473797 ZMYM1Q5SVZ6 1142 aa8.1□□□□□ -1.11
GPCPD1-204ENST00000473797 PRIMPOLQ96LW4 560 aa8.1□□□□□ -1.11
GPCPD1-204ENST00000473797 BRD2P25440 801 aaKnown RBP8.09□□□□□ -1.11
GPCPD1-204ENST00000473797 PLAURQ03405 335 aa8.09□□□□□ -1.11
GPCPD1-204ENST00000473797 FOXD4L6Q3SYB3 417 aaPredicted RBP8.09□□□□□ -1.11
GPCPD1-204ENST00000473797 FOXD4L3Q6VB84 417 aaPredicted RBP8.09□□□□□ -1.11
GPCPD1-204ENST00000473797 LOC102724428A0A0B4J2F2 783 aa8.08□□□□□ -1.12
GPCPD1-204ENST00000473797 SIK1P57059 783 aa8.08□□□□□ -1.12
GPCPD1-204ENST00000473797 C16orf46Q6P387 395 aa8.08□□□□□ -1.12
GPCPD1-204ENST00000473797 IGF2-ASQ6U949 168 aa8.08□□□□□ -1.12
GPCPD1-204ENST00000473797 WFDC8Q8IUA0 241 aa8.08□□□□□ -1.12
GPCPD1-204ENST00000473797 ETFBKMTQ8IXQ9 262 aa8.08□□□□□ -1.12
GPCPD1-204ENST00000473797 RGL4Q8IZJ4 473 aa8.08□□□□□ -1.12
GPCPD1-204ENST00000473797 CMTR1Q8N1G2 835 aaKnown RBP8.08□□□□□ -1.12
GPCPD1-204ENST00000473797 SAP130Q9H0E3 1048 aa8.08□□□□□ -1.12
GPCPD1-204ENST00000473797 USP20Q9Y2K6 914 aa8.08□□□□□ -1.12
GPCPD1-204ENST00000473797 PRMT3O60678 531 aa8.07□□□□□ -1.12
GPCPD1-204ENST00000473797 MMP20O60882 483 aa8.07□□□□□ -1.12
GPCPD1-204ENST00000473797 PRSS36Q5K4E3 855 aa8.07□□□□□ -1.12
GPCPD1-204ENST00000473797 STK32AQ8WU08 396 aa8.07□□□□□ -1.12
GPCPD1-204ENST00000473797 SMG9Q9H0W8 520 aaKnown RBP8.07□□□□□ -1.12
GPCPD1-204ENST00000473797 CXXC1Q9P0U4 656 aaPredicted RBP8.07□□□□□ -1.12
GPCPD1-204ENST00000473797 TNFRSF10BO14763 440 aa8.06□□□□□ -1.12
GPCPD1-204ENST00000473797 PSAPP07602 524 aa8.06□□□□□ -1.12
GPCPD1-204ENST00000473797 MLLT1Q03111 559 aaPredicted RBP8.06□□□□□ -1.12
GPCPD1-204ENST00000473797 DLL1O00548 723 aa8.05□□□□□ -1.12
GPCPD1-204ENST00000473797 PTCD1O75127 700 aaKnown RBP8.05□□□□□ -1.12
GPCPD1-204ENST00000473797 DEAF1O75398 565 aaPredicted RBP8.05□□□□□ -1.12
GPCPD1-204ENST00000473797 FAM26DQ5JW98 314 aa8.05□□□□□ -1.12
GPCPD1-204ENST00000473797 HFE2Q6ZVN8 426 aa8.05□□□□□ -1.12
GPCPD1-204ENST00000473797 NLRP13Q86W25 1043 aa8.05□□□□□ -1.12
GPCPD1-204ENST00000473797 WFDC12Q8WWY7 111 aa8.05□□□□□ -1.12
GPCPD1-204ENST00000473797 CLP1Q92989 425 aaKnown RBP8.05□□□□□ -1.12
GPCPD1-204ENST00000473797 PLD4Q96BZ4 506 aa8.05□□□□□ -1.12
GPCPD1-204ENST00000473797 USP21Q9UK80 565 aa8.05□□□□□ -1.12
GPCPD1-204ENST00000473797 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.04□□□□□ -1.12
GPCPD1-204ENST00000473797 TRIP4Q15650 581 aaPredicted RBP8.04□□□□□ -1.12
GPCPD1-204ENST00000473797 CACTIN-AS1Q8N1I8 211 aa8.04□□□□□ -1.12
GPCPD1-204ENST00000473797 SRA1Q9HD15 236 aaKnown RBP8.04□□□□□ -1.12
GPCPD1-204ENST00000473797 FAM13BQ9NYF5 915 aa8.04□□□□□ -1.12
GPCPD1-204ENST00000473797 J3QW42 95 aa8.03□□□□□ -1.12
GPCPD1-204ENST00000473797 EIF2AK2P19525 551 aaKnown RBP8.03□□□□□ -1.12
GPCPD1-204ENST00000473797 TMEM164Q5U3C3 297 aa8.03□□□□□ -1.12
GPCPD1-204ENST00000473797 CAPN12Q6ZSI9 719 aa8.03□□□□□ -1.12
GPCPD1-204ENST00000473797 TMEM130Q8N3G9 435 aa8.03□□□□□ -1.12
GPCPD1-204ENST00000473797 TP53INP1Q96A56 240 aa8.03□□□□□ -1.12
GPCPD1-204ENST00000473797 NOS3P29474 1203 aa8.02□□□□□ -1.13
GPCPD1-204ENST00000473797 ARTNQ5T4W7 220 aa8.02□□□□□ -1.13
GPCPD1-204ENST00000473797 MAP4K3Q8IVH8 894 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms