RNA–Protein interactions for RNA: ENST00000473778.5

C9orf3-214, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 2,396 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-214ENST00000473778 FAM184AQ8NB25 1140 aa13.06□□□□□ -0.32
C9orf3-214ENST00000473778 DDX17Q92841 729 aaKnown RBP13.06□□□□□ -0.32
C9orf3-214ENST00000473778 DDX58O95786 925 aaKnown RBP13.06□□□□□ -0.32
C9orf3-214ENST00000473778 RFX5P48382 616 aaPredicted RBP13.06□□□□□ -0.32
C9orf3-214ENST00000473778 KRT28Q7Z3Y7 464 aa13.06□□□□□ -0.32
C9orf3-214ENST00000473778 ATP6V1DQ9Y5K8 247 aa13.06□□□□□ -0.32
C9orf3-214ENST00000473778 AFDNP55196 1824 aaKnown RBP13.06□□□□□ -0.32
C9orf3-214ENST00000473778 UQCRHLA0A096LP55 91 aa13.05□□□□□ -0.32
C9orf3-214ENST00000473778 TAF5LO75529 589 aa13.05□□□□□ -0.32
C9orf3-214ENST00000473778 UQCRHP07919 91 aa13.05□□□□□ -0.32
C9orf3-214ENST00000473778 UVSSAQ2YD98 709 aa13.05□□□□□ -0.32
C9orf3-214ENST00000473778 LARP1BQ659C4 914 aaKnown RBP13.05□□□□□ -0.32
C9orf3-214ENST00000473778 SEC62Q99442 399 aaKnown RBP13.05□□□□□ -0.32
C9orf3-214ENST00000473778 CHMP3Q9Y3E7 222 aa13.05□□□□□ -0.32
C9orf3-214ENST00000473778 LMTK3Q96Q04 1460 aa13.05□□□□□ -0.32
C9orf3-214ENST00000473778 LIG1P18858 919 aa13.05□□□□□ -0.32
C9orf3-214ENST00000473778 RPS6KB1P23443 525 aa13.05□□□□□ -0.32
C9orf3-214ENST00000473778 PTPN12Q05209 780 aaKnown RBP13.05□□□□□ -0.32
C9orf3-214ENST00000473778 STK3Q13188 491 aa13.05□□□□□ -0.32
C9orf3-214ENST00000473778 LARP1Q6PKG0 1096 aaKnown RBP13.05□□□□□ -0.32
C9orf3-214ENST00000473778 CCDC129Q6ZRS4 1044 aa13.05□□□□□ -0.32
C9orf3-214ENST00000473778 METTL22Q9BUU2 404 aaPredicted RBP13.05□□□□□ -0.32
C9orf3-214ENST00000473778 ALS2Q96Q42 1657 aa13.04□□□□□ -0.32
C9orf3-214ENST00000473778 KDM4AO75164 1064 aa13.04□□□□□ -0.32
C9orf3-214ENST00000473778 PHKG2P15735 406 aa13.04□□□□□ -0.32
C9orf3-214ENST00000473778 TFCP2Q12800 502 aa13.04□□□□□ -0.32
C9orf3-214ENST00000473778 SLFNL1Q499Z3 407 aa13.04□□□□□ -0.32
C9orf3-214ENST00000473778 BLOC1S2Q6QNY1 142 aa13.04□□□□□ -0.32
C9orf3-214ENST00000473778 ZNF609O15014 1411 aa13.04□□□□□ -0.32
C9orf3-214ENST00000473778 ARFGEF2Q9Y6D5 1785 aa13.03□□□□□ -0.32
C9orf3-214ENST00000473778 GLI3P10071 1580 aa13.03□□□□□ -0.32
C9orf3-214ENST00000473778 ATP5J2-PTCD1G3V325 749 aa13.03□□□□□ -0.32
C9orf3-214ENST00000473778 HIP1O00291 1037 aa13.03□□□□□ -0.32
C9orf3-214ENST00000473778 PTCD1O75127 700 aaKnown RBP13.03□□□□□ -0.32
C9orf3-214ENST00000473778 KIAA2012Q0VF49 1180 aa13.03□□□□□ -0.32
C9orf3-214ENST00000473778 ANKRD13DQ6ZTN6 518 aa13.03□□□□□ -0.32
C9orf3-214ENST00000473778 UBE3BQ7Z3V4 1068 aa13.03□□□□□ -0.32
C9orf3-214ENST00000473778 NLRP2Q9NX02 1062 aa13.03□□□□□ -0.32
C9orf3-214ENST00000473778 HDAC5Q9UQL6 1122 aa13.03□□□□□ -0.32
C9orf3-214ENST00000473778 JAK2O60674 1132 aa13.02□□□□□ -0.32
C9orf3-214ENST00000473778 LETM1O95202 739 aaPredicted RBP13.02□□□□□ -0.32
C9orf3-214ENST00000473778 CAMK4Q16566 473 aa13.02□□□□□ -0.32
C9orf3-214ENST00000473778 TNNI3KQ59H18 835 aa13.02□□□□□ -0.32
C9orf3-214ENST00000473778 USPL1Q5W0Q7 1092 aa13.02□□□□□ -0.32
C9orf3-214ENST00000473778 COPRSQ9NQ92 184 aa13.02□□□□□ -0.32
C9orf3-214ENST00000473778 TFIP11Q9UBB9 837 aaKnown RBP13.02□□□□□ -0.32
C9orf3-214ENST00000473778 FPGT-TNNI3KV9GXZ4 949 aa13.02□□□□□ -0.32
C9orf3-214ENST00000473778 C1orf167Q5SNV9 1468 aa13.02□□□□□ -0.32
C9orf3-214ENST00000473778 COL18A1P39060 1754 aa13.02□□□□□ -0.33
C9orf3-214ENST00000473778 CYP27B1O15528 508 aa13.02□□□□□ -0.33
C9orf3-214ENST00000473778 PSMA5P28066 241 aa13.02□□□□□ -0.33
C9orf3-214ENST00000473778 NEXNQ0ZGT2 675 aa13.02□□□□□ -0.33
C9orf3-214ENST00000473778 DBNDD2Q9BQY9 259 aa13.02□□□□□ -0.33
C9orf3-214ENST00000473778 FAM13BQ9NYF5 915 aa13.02□□□□□ -0.33
C9orf3-214ENST00000473778 LAMA4Q16363 1823 aa13.02□□□□□ -0.33
C9orf3-214ENST00000473778 PLCB2Q00722 1185 aa13.01□□□□□ -0.33
C9orf3-214ENST00000473778 CSPP1Q1MSJ5 1256 aa13.01□□□□□ -0.33
C9orf3-214ENST00000473778 TSGA10IPQ3SY00 556 aa13.01□□□□□ -0.33
C9orf3-214ENST00000473778 CABLES1Q8TDN4 633 aa13.01□□□□□ -0.33
C9orf3-214ENST00000473778 PIBF1Q8WXW3 757 aa13.01□□□□□ -0.33
C9orf3-214ENST00000473778 RAPGEF4Q8WZA2 1011 aa13.01□□□□□ -0.33
C9orf3-214ENST00000473778 KCNF1Q9H3M0 494 aa13.01□□□□□ -0.33
C9orf3-214ENST00000473778 ATP5JP18859 108 aa13.01□□□□□ -0.33
C9orf3-214ENST00000473778 CASP7P55210 303 aa13.01□□□□□ -0.33
C9orf3-214ENST00000473778 A0A0G2JLW4 131 aa13□□□□□ -0.33
C9orf3-214ENST00000473778 MYCNP04198 464 aaPredicted RBP13□□□□□ -0.33
C9orf3-214ENST00000473778 CYP21A2P08686 494 aa13□□□□□ -0.33
C9orf3-214ENST00000473778 KRT85P78386 507 aa13□□□□□ -0.33
C9orf3-214ENST00000473778 RABL6Q3YEC7 729 aaPredicted RBP13□□□□□ -0.33
C9orf3-214ENST00000473778 DDX11Q96FC9 970 aa13□□□□□ -0.33
C9orf3-214ENST00000473778 DNAJC2Q99543 621 aaKnown RBP13□□□□□ -0.33
C9orf3-214ENST00000473778 LRRC2Q9BYS8 371 aa13□□□□□ -0.33
C9orf3-214ENST00000473778 ALDH8A1Q9H2A2 487 aaPredicted RBP13□□□□□ -0.33
C9orf3-214ENST00000473778 CCDC9Q9Y3X0 531 aaKnown RBP13□□□□□ -0.33
C9orf3-214ENST00000473778 PDE4CQ08493 712 aa13□□□□□ -0.33
C9orf3-214ENST00000473778 RNF20Q5VTR2 975 aa13□□□□□ -0.33
C9orf3-214ENST00000473778 STOX1Q6ZVD7 989 aa13□□□□□ -0.33
C9orf3-214ENST00000473778 DDX46Q7L014 1031 aaKnown RBP13□□□□□ -0.33
C9orf3-214ENST00000473778 CKAP2LQ8IYA6 745 aa13□□□□□ -0.33
C9orf3-214ENST00000473778 TSC1Q92574 1164 aa13□□□□□ -0.33
C9orf3-214ENST00000473778 MRVI1Q9Y6F6 885 aa13□□□□□ -0.33
C9orf3-214ENST00000473778 ELP1O95163 1332 aa12.99□□□□□ -0.33
C9orf3-214ENST00000473778 NOLC1Q14978 699 aaKnown RBP eCLIP12.99□□□□□ -0.33
C9orf3-214ENST00000473778 CHRNA2Q15822 529 aa12.99□□□□□ -0.33
C9orf3-214ENST00000473778 SASS6Q6UVJ0 657 aa12.99□□□□□ -0.33
C9orf3-214ENST00000473778 PGBD1Q96JS3 809 aa12.99□□□□□ -0.33
C9orf3-214ENST00000473778 DACT1Q9NYF0 836 aa12.99□□□□□ -0.33
C9orf3-214ENST00000473778 LUZP1Q86V48 1076 aa12.99□□□□□ -0.33
C9orf3-214ENST00000473778 LEO1Q8WVC0 666 aaPredicted RBP12.99□□□□□ -0.33
C9orf3-214ENST00000473778 GTF3C6Q969F1 213 aa12.99□□□□□ -0.33
C9orf3-214ENST00000473778 PYCARDQ9ULZ3 195 aa12.99□□□□□ -0.33
C9orf3-214ENST00000473778 MST1RQ04912 1400 aa12.98□□□□□ -0.33
C9orf3-214ENST00000473778 A0A087WZG4 1122 aa12.98□□□□□ -0.33
C9orf3-214ENST00000473778 SNRPA1P09661 255 aaKnown RBP12.98□□□□□ -0.33
C9orf3-214ENST00000473778 Q6ZUG5 572 aa12.98□□□□□ -0.33
C9orf3-214ENST00000473778 SPC24Q8NBT2 197 aa12.98□□□□□ -0.33
C9orf3-214ENST00000473778 HMG20BQ9P0W2 317 aa12.98□□□□□ -0.33
C9orf3-214ENST00000473778 ADAMTSL3P82987 1691 aa12.98□□□□□ -0.33
C9orf3-214ENST00000473778 NR1I2O75469 434 aa12.98□□□□□ -0.33
C9orf3-214ENST00000473778 ANKRD1Q15327 319 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms