RNA–Protein interactions for RNA: ENST00000473711.1

SP140-208, Transcript of SP140 nuclear body protein, humanhuman

TSL 2

Gene SP140, Length 644 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-208ENST00000473711 NIP7Q9Y221 180 aaKnown RBP eCLIP13.33□□□□□ -0.28
SP140-208ENST00000473711 UBN2Q6ZU65 1347 aa13.33□□□□□ -0.28
SP140-208ENST00000473711 ATMINO43313 823 aaPredicted RBP13.32□□□□□ -0.28
SP140-208ENST00000473711 RFC4P35249 363 aa13.32□□□□□ -0.28
SP140-208ENST00000473711 LMBR1LQ6UX01 489 aa13.32□□□□□ -0.28
SP140-208ENST00000473711 BICDL1Q6ZP65 573 aa13.32□□□□□ -0.28
SP140-208ENST00000473711 BCL2L12Q9HB09 334 aa13.32□□□□□ -0.28
SP140-208ENST00000473711 PA2G4Q9UQ80 394 aaKnown RBP13.32□□□□□ -0.28
SP140-208ENST00000473711 CHMP3Q9Y3E7 222 aa13.32□□□□□ -0.28
SP140-208ENST00000473711 C4BP0C0L5 1744 aa13.31□□□□□ -0.28
SP140-208ENST00000473711 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.31□□□□□ -0.28
SP140-208ENST00000473711 HMGB2P26583 209 aaKnown RBP13.31□□□□□ -0.28
SP140-208ENST00000473711 RABL6Q3YEC7 729 aaPredicted RBP13.31□□□□□ -0.28
SP140-208ENST00000473711 PARP10Q53GL7 1025 aa13.31□□□□□ -0.28
SP140-208ENST00000473711 C16orf71Q8IYS4 520 aaPredicted RBP13.31□□□□□ -0.28
SP140-208ENST00000473711 UTP14AQ9BVJ6 771 aaKnown RBP13.31□□□□□ -0.28
SP140-208ENST00000473711 NUP98P52948 1817 aa13.3□□□□□ -0.28
SP140-208ENST00000473711 TAF1LQ8IZX4 1826 aa13.3□□□□□ -0.28
SP140-208ENST00000473711 IRS4O14654 1257 aaPredicted RBP13.3□□□□□ -0.28
SP140-208ENST00000473711 RAB11FIP3O75154 756 aa13.3□□□□□ -0.28
SP140-208ENST00000473711 EN1Q05925 392 aaPredicted RBP13.3□□□□□ -0.28
SP140-208ENST00000473711 OS9Q13438 667 aaPredicted RBP13.3□□□□□ -0.28
SP140-208ENST00000473711 TBC1D9BQ66K14 1250 aa13.3□□□□□ -0.28
SP140-208ENST00000473711 PLA2G12BQ9BX93 195 aa13.3□□□□□ -0.28
SP140-208ENST00000473711 NOP58Q9Y2X3 529 aaKnown RBP13.3□□□□□ -0.28
SP140-208ENST00000473711 CDHR2Q9BYE9 1310 aa13.3□□□□□ -0.28
SP140-208ENST00000473711 RGL2O15211 777 aa13.29□□□□□ -0.28
SP140-208ENST00000473711 RFX5P48382 616 aaPredicted RBP13.29□□□□□ -0.28
SP140-208ENST00000473711 G3BP1Q13283 466 aaKnown RBP eCLIP13.29□□□□□ -0.28
SP140-208ENST00000473711 EZH2Q15910 746 aaKnown RBP13.29□□□□□ -0.28
SP140-208ENST00000473711 HSP90AB4PQ58FF6 505 aa13.29□□□□□ -0.28
SP140-208ENST00000473711 DCAF8Q5TAQ9 597 aa13.29□□□□□ -0.28
SP140-208ENST00000473711 KLHDC4Q8TBB5 520 aa13.29□□□□□ -0.28
SP140-208ENST00000473711 SGIP1Q9BQI5 828 aa13.29□□□□□ -0.28
SP140-208ENST00000473711 LRRCC1Q9C099 1032 aa13.29□□□□□ -0.28
SP140-208ENST00000473711 SSFA2P28290 1259 aa13.28□□□□□ -0.28
SP140-208ENST00000473711 SF3B2Q13435 895 aaKnown RBP13.28□□□□□ -0.28
SP140-208ENST00000473711 ZNF827Q17R98 1081 aa13.28□□□□□ -0.28
SP140-208ENST00000473711 RHPN1Q8TCX5 695 aa13.28□□□□□ -0.28
SP140-208ENST00000473711 CCDC85AQ96PX6 553 aaPredicted RBP13.28□□□□□ -0.28
SP140-208ENST00000473711 SETDB2Q96T68 719 aa13.28□□□□□ -0.28
SP140-208ENST00000473711 SIL1Q9H173 461 aa13.28□□□□□ -0.28
SP140-208ENST00000473711 TFCP2L1Q9NZI6 479 aa13.28□□□□□ -0.28
SP140-208ENST00000473711 PCDHB13Q9Y5F0 798 aa13.28□□□□□ -0.28
SP140-208ENST00000473711 SH3TC1Q8TE82 1336 aa13.28□□□□□ -0.28
SP140-208ENST00000473711 USP42Q9H9J4 1324 aaKnown RBP13.28□□□□□ -0.28
SP140-208ENST00000473711 PDE8AO60658 829 aa13.27□□□□□ -0.29
SP140-208ENST00000473711 NTSR2O95665 410 aa13.27□□□□□ -0.29
SP140-208ENST00000473711 CSF1RP07333 972 aa13.27□□□□□ -0.29
SP140-208ENST00000473711 HCLS1P14317 486 aaPredicted RBP13.27□□□□□ -0.29
SP140-208ENST00000473711 PTPN12Q05209 780 aaKnown RBP13.27□□□□□ -0.29
SP140-208ENST00000473711 NUTM1Q86Y26 1132 aa13.27□□□□□ -0.29
SP140-208ENST00000473711 OTUD7AQ8TE49 926 aaPredicted RBP13.27□□□□□ -0.29
SP140-208ENST00000473711 KIF1BPQ96EK5 621 aa13.27□□□□□ -0.29
SP140-208ENST00000473711 CAMKK2Q96RR4 588 aa13.27□□□□□ -0.29
SP140-208ENST00000473711 IL1RAPL2Q9NP60 686 aa13.27□□□□□ -0.29
SP140-208ENST00000473711 COPRSQ9NQ92 184 aa13.27□□□□□ -0.29
SP140-208ENST00000473711 ERFEQ4G0M1 354 aa13.26□□□□□ -0.29
SP140-208ENST00000473711 ANKRD36CQ5JPF3 1778 aa13.26□□□□□ -0.29
SP140-208ENST00000473711 PLEKHM2Q8IWE5 1019 aa13.26□□□□□ -0.29
SP140-208ENST00000473711 TTLL11Q8NHH1 800 aa13.26□□□□□ -0.29
SP140-208ENST00000473711 ZNF594Q96JF6 807 aaPredicted RBP13.26□□□□□ -0.29
SP140-208ENST00000473711 SASH1O94885 1247 aa13.25□□□□□ -0.29
SP140-208ENST00000473711 GTF2E1P29083 439 aaPredicted RBP13.25□□□□□ -0.29
SP140-208ENST00000473711 TIE1P35590 1138 aa13.25□□□□□ -0.29
SP140-208ENST00000473711 CTSWP56202 376 aa13.25□□□□□ -0.29
SP140-208ENST00000473711 CCDC57Q2TAC2 916 aa13.25□□□□□ -0.29
SP140-208ENST00000473711 ERC1Q8IUD2 1116 aa13.25□□□□□ -0.29
SP140-208ENST00000473711 SLC39A7Q92504 469 aa13.25□□□□□ -0.29
SP140-208ENST00000473711 TRPC6Q9Y210 931 aa13.25□□□□□ -0.29
SP140-208ENST00000473711 GYS1P13807 737 aa13.24□□□□□ -0.29
SP140-208ENST00000473711 BAG6P46379 1132 aa13.24□□□□□ -0.29
SP140-208ENST00000473711 ATN1P54259 1190 aaPredicted RBP13.24□□□□□ -0.29
SP140-208ENST00000473711 IFIT5Q13325 482 aaKnown RBP13.24□□□□□ -0.29
SP140-208ENST00000473711 NFIXQ14938 502 aa13.24□□□□□ -0.29
SP140-208ENST00000473711 FAM161AQ3B820 660 aa13.24□□□□□ -0.29
SP140-208ENST00000473711 DEFB132Q7Z7B7 95 aa13.24□□□□□ -0.29
SP140-208ENST00000473711 NBPF5PQ86XG9 351 aaPredicted RBP13.24□□□□□ -0.29
SP140-208ENST00000473711 COL23A1Q86Y22 540 aaPredicted RBP13.24□□□□□ -0.29
SP140-208ENST00000473711 NYXQ9GZU5 481 aa13.24□□□□□ -0.29
SP140-208ENST00000473711 GREM2Q9H772 168 aa13.24□□□□□ -0.29
SP140-208ENST00000473711 BMP2KQ9NSY1 1161 aaPredicted RBP13.24□□□□□ -0.29
SP140-208ENST00000473711 BCORQ6W2J9 1755 aa13.24□□□□□ -0.29
SP140-208ENST00000473711 TNS1Q9HBL0 1735 aaKnown RBP13.24□□□□□ -0.29
SP140-208ENST00000473711 HSP90B1P14625 803 aaKnown RBP13.23□□□□□ -0.29
SP140-208ENST00000473711 TAF7LQ5H9L4 462 aa13.23□□□□□ -0.29
SP140-208ENST00000473711 TPTE2Q6XPS3 522 aa13.23□□□□□ -0.29
SP140-208ENST00000473711 CCDC24Q8N4L8 307 aa13.23□□□□□ -0.29
SP140-208ENST00000473711 TSHZ2Q9NRE2 1034 aa13.23□□□□□ -0.29
SP140-208ENST00000473711 METRNQ9UJH8 293 aa13.23□□□□□ -0.29
SP140-208ENST00000473711 EP400Q96L91 3159 aa13.22□□□□□ -0.29
SP140-208ENST00000473711 ANKRD18BA2A2Z9 1011 aa13.22□□□□□ -0.29
SP140-208ENST00000473711 C7P10643 843 aa13.22□□□□□ -0.29
SP140-208ENST00000473711 ITGA6P23229 1130 aa13.22□□□□□ -0.29
SP140-208ENST00000473711 TFCP2Q12800 502 aa13.22□□□□□ -0.29
SP140-208ENST00000473711 LRRC24Q50LG9 513 aa13.22□□□□□ -0.29
SP140-208ENST00000473711 SLC10A5Q5PT55 438 aa13.22□□□□□ -0.29
SP140-208ENST00000473711 CLASRPQ8N2M8 674 aaKnown RBP13.22□□□□□ -0.29
SP140-208ENST00000473711 FLAD1Q8NFF5 587 aa13.22□□□□□ -0.29
SP140-208ENST00000473711 PUS3Q9BZE2 481 aaKnown RBP13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms