RNA–Protein interactions for RNA: ENST00000473345.5

MCF2L-223, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 399 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-223ENST00000473345 PNISRQ8TF01 805 aaKnown RBP12.74□□□□□ -0.37
MCF2L-223ENST00000473345 NLRP3Q96P20 1036 aa12.74□□□□□ -0.37
MCF2L-223ENST00000473345 UTP14AQ9BVJ6 771 aaKnown RBP12.74□□□□□ -0.37
MCF2L-223ENST00000473345 ERBB4Q15303 1308 aa12.73□□□□□ -0.37
MCF2L-223ENST00000473345 PARP10Q53GL7 1025 aa12.73□□□□□ -0.37
MCF2L-223ENST00000473345 COPS6Q7L5N1 327 aa12.73□□□□□ -0.37
MCF2L-223ENST00000473345 PPP1R42Q7Z4L9 355 aa12.73□□□□□ -0.37
MCF2L-223ENST00000473345 SP8Q8IXZ3 490 aa12.73□□□□□ -0.37
MCF2L-223ENST00000473345 XAGE3Q8WTP9 111 aa12.73□□□□□ -0.37
MCF2L-223ENST00000473345 MCOLN1Q9GZU1 580 aa12.73□□□□□ -0.37
MCF2L-223ENST00000473345 TSPYL4Q9UJ04 414 aa12.73□□□□□ -0.37
MCF2L-223ENST00000473345 LRRC37AA6NMS7 1700 aa12.73□□□□□ -0.37
MCF2L-223ENST00000473345 DDX60Q8IY21 1712 aaKnown RBP12.72□□□□□ -0.37
MCF2L-223ENST00000473345 ECE1P42892 770 aa12.72□□□□□ -0.37
MCF2L-223ENST00000473345 AIMP1Q12904 312 aaKnown RBP12.72□□□□□ -0.37
MCF2L-223ENST00000473345 CIAPIN1Q6FI81 312 aa12.72□□□□□ -0.37
MCF2L-223ENST00000473345 SAMD7Q7Z3H4 446 aa12.72□□□□□ -0.37
MCF2L-223ENST00000473345 CELF1Q92879 486 aaKnown RBP12.72□□□□□ -0.37
MCF2L-223ENST00000473345 ZNF408Q9H9D4 720 aa12.72□□□□□ -0.37
MCF2L-223ENST00000473345 ANKRD36CQ5JPF3 1778 aa12.71□□□□□ -0.37
MCF2L-223ENST00000473345 RTL9Q8NET4 1388 aa12.71□□□□□ -0.37
MCF2L-223ENST00000473345 ASTN2O75129 1339 aaPredicted RBP12.71□□□□□ -0.37
MCF2L-223ENST00000473345 FAM155AB1AL88 458 aaPredicted RBP12.71□□□□□ -0.37
MCF2L-223ENST00000473345 MAP2K2P36507 400 aa12.71□□□□□ -0.37
MCF2L-223ENST00000473345 GRIPAP1Q4V328 841 aa12.71□□□□□ -0.37
MCF2L-223ENST00000473345 DPP8Q6V1X1 898 aaPredicted RBP12.71□□□□□ -0.37
MCF2L-223ENST00000473345 USP48Q86UV5 1035 aa12.71□□□□□ -0.37
MCF2L-223ENST00000473345 MPNDQ8N594 471 aa12.71□□□□□ -0.37
MCF2L-223ENST00000473345 CNOT7Q9UIV1 285 aaKnown RBP12.71□□□□□ -0.37
MCF2L-223ENST00000473345 PSMD14O00487 310 aa12.7□□□□□ -0.38
MCF2L-223ENST00000473345 BBOX1O75936 387 aa12.7□□□□□ -0.38
MCF2L-223ENST00000473345 TCIRG1Q13488 830 aa12.7□□□□□ -0.38
MCF2L-223ENST00000473345 GRAPQ13588 217 aa12.7□□□□□ -0.38
MCF2L-223ENST00000473345 MICALL2Q8IY33 904 aa12.7□□□□□ -0.38
MCF2L-223ENST00000473345 GRAPLQ8TC17 118 aaPredicted RBP12.7□□□□□ -0.38
MCF2L-223ENST00000473345 POLLQ9UGP5 575 aa12.7□□□□□ -0.38
MCF2L-223ENST00000473345 CASP8AP2Q9UKL3 1982 aa12.69□□□□□ -0.38
MCF2L-223ENST00000473345 ADM5C9JUS6 153 aa12.69□□□□□ -0.38
MCF2L-223ENST00000473345 TMPOP42166 694 aaKnown RBP12.69□□□□□ -0.38
MCF2L-223ENST00000473345 BRPF1P55201 1214 aaPredicted RBP12.69□□□□□ -0.38
MCF2L-223ENST00000473345 RIPK4P57078 832 aa12.69□□□□□ -0.38
MCF2L-223ENST00000473345 HHIPL1Q96JK4 782 aa12.69□□□□□ -0.38
MCF2L-223ENST00000473345 VPS33BQ9H267 617 aa12.69□□□□□ -0.38
MCF2L-223ENST00000473345 DBNDD1Q9H9R9 158 aa12.69□□□□□ -0.38
MCF2L-223ENST00000473345 TRMT112Q9UI30 125 aaKnown RBP12.69□□□□□ -0.38
MCF2L-223ENST00000473345 GPSM2P81274 684 aa12.68□□□□□ -0.38
MCF2L-223ENST00000473345 MLLT1Q03111 559 aaPredicted RBP12.68□□□□□ -0.38
MCF2L-223ENST00000473345 TBC1D10BQ4KMP7 808 aaPredicted RBP12.68□□□□□ -0.38
MCF2L-223ENST00000473345 FAM89AQ96GI7 184 aa12.68□□□□□ -0.38
MCF2L-223ENST00000473345 ISCA1Q9BUE6 129 aa12.68□□□□□ -0.38
MCF2L-223ENST00000473345 BCL2L13Q9BXK5 485 aa12.68□□□□□ -0.38
MCF2L-223ENST00000473345 CHPF2Q9P2E5 772 aa12.68□□□□□ -0.38
MCF2L-223ENST00000473345 TRIM35Q9UPQ4 493 aa12.68□□□□□ -0.38
MCF2L-223ENST00000473345 SH3TC1Q8TE82 1336 aa12.67□□□□□ -0.38
MCF2L-223ENST00000473345 WTIPA6NIX2 430 aaPredicted RBP12.67□□□□□ -0.38
MCF2L-223ENST00000473345 ATP5J2-PTCD1G3V325 749 aa12.67□□□□□ -0.38
MCF2L-223ENST00000473345 RIMBP2O15034 1052 aa12.67□□□□□ -0.38
MCF2L-223ENST00000473345 DOK7Q18PE1 504 aa12.67□□□□□ -0.38
MCF2L-223ENST00000473345 RTL5Q5HYW3 569 aaPredicted RBP12.67□□□□□ -0.38
MCF2L-223ENST00000473345 CDC37L1Q7L3B6 337 aa12.67□□□□□ -0.38
MCF2L-223ENST00000473345 CCDC146Q8IYE0 955 aa12.67□□□□□ -0.38
MCF2L-223ENST00000473345 SUPT20HQ8NEM7 779 aa12.67□□□□□ -0.38
MCF2L-223ENST00000473345 ZC3H15Q8WU90 426 aaKnown RBP12.67□□□□□ -0.38
MCF2L-223ENST00000473345 BEGAINQ9BUH8 593 aa12.67□□□□□ -0.38
MCF2L-223ENST00000473345 SCN9AQ15858 1988 aa12.67□□□□□ -0.38
MCF2L-223ENST00000473345 CDHR2Q9BYE9 1310 aa12.66□□□□□ -0.38
MCF2L-223ENST00000473345 CHL1O00533 1208 aa12.66□□□□□ -0.38
MCF2L-223ENST00000473345 HUNKP57058 714 aa12.66□□□□□ -0.38
MCF2L-223ENST00000473345 DGKZQ13574 1117 aa12.66□□□□□ -0.38
MCF2L-223ENST00000473345 DDX46Q7L014 1031 aaKnown RBP12.66□□□□□ -0.38
MCF2L-223ENST00000473345 MAPK8IP3Q9UPT6 1336 aa12.65□□□□□ -0.38
MCF2L-223ENST00000473345 TNIP1Q15025 636 aa12.65□□□□□ -0.38
MCF2L-223ENST00000473345 SF3B3Q15393 1217 aaKnown RBP12.65□□□□□ -0.38
MCF2L-223ENST00000473345 RBM26Q5T8P6 1007 aaKnown RBP12.65□□□□□ -0.38
MCF2L-223ENST00000473345 SEC31BQ9NQW1 1179 aa12.65□□□□□ -0.38
MCF2L-223ENST00000473345 SCAF8Q9UPN6 1271 aaKnown RBP12.65□□□□□ -0.38
MCF2L-223ENST00000473345 TNRC18O15417 2968 aaPredicted RBP12.65□□□□□ -0.38
MCF2L-223ENST00000473345 ECE2O60344 883 aa12.64□□□□□ -0.39
MCF2L-223ENST00000473345 KIF23Q02241 960 aaPredicted RBP12.64□□□□□ -0.39
MCF2L-223ENST00000473345 WASHC4Q2M389 1173 aa12.64□□□□□ -0.39
MCF2L-223ENST00000473345 KRT26Q7Z3Y9 468 aa12.64□□□□□ -0.39
MCF2L-223ENST00000473345 DPF2Q92785 391 aa12.64□□□□□ -0.39
MCF2L-223ENST00000473345 JARID2Q92833 1246 aaPredicted RBP12.64□□□□□ -0.39
MCF2L-223ENST00000473345 NSFL1CQ9UNZ2 370 aaKnown RBP12.64□□□□□ -0.39
MCF2L-223ENST00000473345 NOGQ13253 232 aa12.63□□□□□ -0.39
MCF2L-223ENST00000473345 NEUROD2Q15784 382 aa12.63□□□□□ -0.39
MCF2L-223ENST00000473345 HSP90AB3PQ58FF7 597 aa12.63□□□□□ -0.39
MCF2L-223ENST00000473345 RGMBQ6NW40 437 aa12.63□□□□□ -0.39
MCF2L-223ENST00000473345 TBC1D16Q8TBP0 767 aa12.63□□□□□ -0.39
MCF2L-223ENST00000473345 GBA2Q9HCG7 927 aaPredicted RBP12.63□□□□□ -0.39
MCF2L-223ENST00000473345 BABAM1Q9NWV8 329 aa12.63□□□□□ -0.39
MCF2L-223ENST00000473345 RNF186Q9NXI6 227 aa12.63□□□□□ -0.39
MCF2L-223ENST00000473345 H7C1D1 291 aa12.62□□□□□ -0.39
MCF2L-223ENST00000473345 CA12O43570 354 aa12.62□□□□□ -0.39
MCF2L-223ENST00000473345 NEFMP07197 916 aa12.62□□□□□ -0.39
MCF2L-223ENST00000473345 SOX10P56693 466 aa12.62□□□□□ -0.39
MCF2L-223ENST00000473345 MOB2Q70IA6 237 aa12.62□□□□□ -0.39
MCF2L-223ENST00000473345 PLBD2Q8NHP8 589 aa12.62□□□□□ -0.39
MCF2L-223ENST00000473345 CFAP44Q96MT7 982 aa12.62□□□□□ -0.39
MCF2L-223ENST00000473345 GGA3Q9NZ52 723 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms