RNA–Protein interactions for RNA: ENST00000473177.1

LRCH3-214, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 520 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-214ENST00000473177 ROBO2Q9HCK4 1378 aa6.57□□□□□ -1.36
LRCH3-214ENST00000473177 SPATA31A3Q5VYP0 1347 aa6.56□□□□□ -1.36
LRCH3-214ENST00000473177 GTF2IP78347 998 aa6.56□□□□□ -1.36
LRCH3-214ENST00000473177 CLDN10P78369 228 aa6.56□□□□□ -1.36
LRCH3-214ENST00000473177 DDX10Q13206 875 aaKnown RBP6.56□□□□□ -1.36
LRCH3-214ENST00000473177 ELOAQ14241 798 aaKnown RBP6.56□□□□□ -1.36
LRCH3-214ENST00000473177 CRTC2Q53ET0 693 aaPredicted RBP6.56□□□□□ -1.36
LRCH3-214ENST00000473177 CDCA8Q53HL2 280 aa6.56□□□□□ -1.36
LRCH3-214ENST00000473177 LARP1Q6PKG0 1096 aaKnown RBP6.56□□□□□ -1.36
LRCH3-214ENST00000473177 HOMEZQ8IX15 550 aa6.56□□□□□ -1.36
LRCH3-214ENST00000473177 LARGE2Q8N3Y3 721 aa6.56□□□□□ -1.36
LRCH3-214ENST00000473177 OGFOD1Q8N543 542 aa6.56□□□□□ -1.36
LRCH3-214ENST00000473177 CAMKK2Q96RR4 588 aa6.56□□□□□ -1.36
LRCH3-214ENST00000473177 OSBPL3Q9H4L5 887 aa6.56□□□□□ -1.36
LRCH3-214ENST00000473177 DNAAF2Q9NVR5 837 aaKnown RBP6.56□□□□□ -1.36
LRCH3-214ENST00000473177 PPP4R2Q9NY27 417 aa6.56□□□□□ -1.36
LRCH3-214ENST00000473177 PCDHGA11Q9Y5H2 935 aa6.56□□□□□ -1.36
LRCH3-214ENST00000473177 HFM1A2PYH4 1435 aa6.56□□□□□ -1.36
LRCH3-214ENST00000473177 CCDC144AA2RUR9 1427 aa6.56□□□□□ -1.36
LRCH3-214ENST00000473177 RAB3GAP2Q9H2M9 1393 aa6.56□□□□□ -1.36
LRCH3-214ENST00000473177 TIMP2P16035 220 aa6.55□□□□□ -1.36
LRCH3-214ENST00000473177 ADD1P35611 737 aaKnown RBP6.55□□□□□ -1.36
LRCH3-214ENST00000473177 WDR4P57081 412 aaKnown RBP6.55□□□□□ -1.36
LRCH3-214ENST00000473177 PTK7Q13308 1070 aa6.55□□□□□ -1.36
LRCH3-214ENST00000473177 FAM196AQ6ZSG2 479 aa6.55□□□□□ -1.36
LRCH3-214ENST00000473177 HPS1Q92902 700 aa6.55□□□□□ -1.36
LRCH3-214ENST00000473177 ITPKCQ96DU7 683 aa6.55□□□□□ -1.36
LRCH3-214ENST00000473177 TONSLQ96HA7 1378 aa6.55□□□□□ -1.36
LRCH3-214ENST00000473177 IQGAP3Q86VI3 1631 aa6.54□□□□□ -1.36
LRCH3-214ENST00000473177 CDC42BPGQ6DT37 1551 aa6.54□□□□□ -1.36
LRCH3-214ENST00000473177 TNS3Q68CZ2 1445 aa6.54□□□□□ -1.36
LRCH3-214ENST00000473177 USP17L15C9J2P7 530 aa6.54□□□□□ -1.36
LRCH3-214ENST00000473177 USP17L10C9JJH3 530 aa6.54□□□□□ -1.36
LRCH3-214ENST00000473177 USP17L13C9JLJ4 530 aa6.54□□□□□ -1.36
LRCH3-214ENST00000473177 USP17L12C9JPN9 530 aa6.54□□□□□ -1.36
LRCH3-214ENST00000473177 USP17L11C9JVI0 530 aa6.54□□□□□ -1.36
LRCH3-214ENST00000473177 USP17L21D6R901 530 aa6.54□□□□□ -1.36
LRCH3-214ENST00000473177 USP17L18D6R9N7 530 aa6.54□□□□□ -1.36
LRCH3-214ENST00000473177 USP17L22D6RA61 530 aa6.54□□□□□ -1.36
LRCH3-214ENST00000473177 USP17L17D6RBQ6 530 aa6.54□□□□□ -1.36
LRCH3-214ENST00000473177 USP17L19D6RCP7 530 aa6.54□□□□□ -1.36
LRCH3-214ENST00000473177 USP17L20D6RJB6 530 aa6.54□□□□□ -1.36
LRCH3-214ENST00000473177 ZBTB7BO15156 539 aaPredicted RBP6.54□□□□□ -1.36
LRCH3-214ENST00000473177 ZIC2O95409 532 aaPredicted RBP6.54□□□□□ -1.36
LRCH3-214ENST00000473177 PSME1Q06323 249 aa6.54□□□□□ -1.36
LRCH3-214ENST00000473177 USP17L24Q0WX57 530 aa6.54□□□□□ -1.36
LRCH3-214ENST00000473177 Q6ZVU0 165 aa6.54□□□□□ -1.36
LRCH3-214ENST00000473177 KRT28Q7Z3Y7 464 aa6.54□□□□□ -1.36
LRCH3-214ENST00000473177 SIX5Q8N196 739 aa6.54□□□□□ -1.36
LRCH3-214ENST00000473177 BTG4Q9NY30 223 aa6.54□□□□□ -1.36
LRCH3-214ENST00000473177 PLCH1Q4KWH8 1693 aa6.53□□□□□ -1.36
LRCH3-214ENST00000473177 CAMTA1Q9Y6Y1 1673 aa6.53□□□□□ -1.36
LRCH3-214ENST00000473177 DKK1O94907 266 aa6.53□□□□□ -1.36
LRCH3-214ENST00000473177 AVPP01185 164 aa6.53□□□□□ -1.36
LRCH3-214ENST00000473177 CYP2U1Q7Z449 544 aa6.53□□□□□ -1.36
LRCH3-214ENST00000473177 ZFAND3Q9H8U3 227 aa6.53□□□□□ -1.36
LRCH3-214ENST00000473177 KIAA1024Q9UPX6 916 aa6.53□□□□□ -1.36
LRCH3-214ENST00000473177 GNRH1P01148 92 aa6.52□□□□□ -1.37
LRCH3-214ENST00000473177 ADH1AP07327 375 aa6.52□□□□□ -1.37
LRCH3-214ENST00000473177 CSB-PGBD3P0DP91 1061 aa6.52□□□□□ -1.37
LRCH3-214ENST00000473177 CCDC102BQ68D86 513 aa6.52□□□□□ -1.37
LRCH3-214ENST00000473177 ANKMY2Q8IV38 441 aa6.52□□□□□ -1.37
LRCH3-214ENST00000473177 RETREG2Q8NC44 543 aa6.52□□□□□ -1.37
LRCH3-214ENST00000473177 ZNF594Q96JF6 807 aaPredicted RBP6.52□□□□□ -1.37
LRCH3-214ENST00000473177 ZMIZ1Q9ULJ6 1067 aa6.52□□□□□ -1.37
LRCH3-214ENST00000473177 NOVA2Q9UNW9 492 aaKnown RBP6.52□□□□□ -1.37
LRCH3-214ENST00000473177 USTQ9Y2C2 406 aa6.52□□□□□ -1.37
LRCH3-214ENST00000473177 TNS1Q9HBL0 1735 aaKnown RBP6.52□□□□□ -1.37
LRCH3-214ENST00000473177 NWD2Q9ULI1 1742 aa6.52□□□□□ -1.37
LRCH3-214ENST00000473177 ARHGEF10O15013 1369 aa6.52□□□□□ -1.37
LRCH3-214ENST00000473177 NRKQ7Z2Y5 1582 aa6.52□□□□□ -1.37
LRCH3-214ENST00000473177 E9PCH4 1651 aa6.52□□□□□ -1.37
LRCH3-214ENST00000473177 NAIPQ13075 1403 aa6.51□□□□□ -1.37
LRCH3-214ENST00000473177 FAM83GA6ND36 823 aa6.51□□□□□ -1.37
LRCH3-214ENST00000473177 WASLO00401 505 aaPredicted RBP6.51□□□□□ -1.37
LRCH3-214ENST00000473177 PDE4CQ08493 712 aa6.51□□□□□ -1.37
LRCH3-214ENST00000473177 DPYDQ12882 1025 aa6.51□□□□□ -1.37
LRCH3-214ENST00000473177 CBLBQ13191 982 aa6.51□□□□□ -1.37
LRCH3-214ENST00000473177 PDE3BQ13370 1112 aa6.51□□□□□ -1.37
LRCH3-214ENST00000473177 FAM50AQ14320 339 aaKnown RBP6.51□□□□□ -1.37
LRCH3-214ENST00000473177 KDF1Q8NAX2 398 aaPredicted RBP6.51□□□□□ -1.37
LRCH3-214ENST00000473177 TPCN2Q8NHX9 752 aa6.51□□□□□ -1.37
LRCH3-214ENST00000473177 FAM200AQ8TCP9 573 aa6.51□□□□□ -1.37
LRCH3-214ENST00000473177 SPATA31A5Q5VU36 1347 aa6.5□□□□□ -1.37
LRCH3-214ENST00000473177 SPATA31A7Q8IWB4 1347 aa6.5□□□□□ -1.37
LRCH3-214ENST00000473177 NUP155O75694 1391 aa6.5□□□□□ -1.37
LRCH3-214ENST00000473177 CAPN5O15484 640 aaPredicted RBP6.5□□□□□ -1.37
LRCH3-214ENST00000473177 ZBTB7AO95365 584 aa6.5□□□□□ -1.37
LRCH3-214ENST00000473177 ITGAEP38570 1179 aa6.5□□□□□ -1.37
LRCH3-214ENST00000473177 SCNN1DP51172 638 aa6.5□□□□□ -1.37
LRCH3-214ENST00000473177 SEC13P55735 322 aa6.5□□□□□ -1.37
LRCH3-214ENST00000473177 TMEM164Q5U3C3 297 aa6.5□□□□□ -1.37
LRCH3-214ENST00000473177 MEIOBQ8N635 442 aa6.5□□□□□ -1.37
LRCH3-214ENST00000473177 STK32AQ8WU08 396 aa6.5□□□□□ -1.37
LRCH3-214ENST00000473177 FHDC1Q9C0D6 1143 aaPredicted RBP6.5□□□□□ -1.37
LRCH3-214ENST00000473177 NEXMIFQ5QGS0 1516 aa6.5□□□□□ -1.37
LRCH3-214ENST00000473177 PRAG1Q86YV5 1406 aa6.5□□□□□ -1.37
LRCH3-214ENST00000473177 KIF1AQ12756 1690 aa6.49□□□□□ -1.37
LRCH3-214ENST00000473177 TMEM88BA6NKF7 163 aa6.49□□□□□ -1.37
LRCH3-214ENST00000473177 TMEM229AB2RXF0 380 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms