RNA–Protein interactions for RNA: ENST00000466780.5

PDZRN3-205, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-205ENST00000466780 TEFQ10587 303 aa15.37■□□□□ 0.05
PDZRN3-205ENST00000466780 RNF20Q5VTR2 975 aa15.37■□□□□ 0.05
PDZRN3-205ENST00000466780 MPRIPQ6WCQ1 1025 aa15.37■□□□□ 0.05
PDZRN3-205ENST00000466780 FSD1Q9BTV5 496 aa15.37■□□□□ 0.05
PDZRN3-205ENST00000466780 LTN1O94822 1766 aa15.37■□□□□ 0.05
PDZRN3-205ENST00000466780 ANKARQ7Z5J8 1434 aa15.37■□□□□ 0.05
PDZRN3-205ENST00000466780 ZNF165P49910 485 aa15.37■□□□□ 0.05
PDZRN3-205ENST00000466780 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.37■□□□□ 0.05
PDZRN3-205ENST00000466780 IP6K1Q92551 441 aa15.37■□□□□ 0.05
PDZRN3-205ENST00000466780 GTPBP4Q9BZE4 634 aaKnown RBP15.37■□□□□ 0.05
PDZRN3-205ENST00000466780 BICC1Q9H694 974 aaKnown RBP15.37■□□□□ 0.05
PDZRN3-205ENST00000466780 PRAMEF22A3QJZ6 481 aa15.36■□□□□ 0.05
PDZRN3-205ENST00000466780 CCDC144BQ3MJ40 725 aa15.36■□□□□ 0.05
PDZRN3-205ENST00000466780 CCDC144CPQ8IYA2 1237 aa15.36■□□□□ 0.05
PDZRN3-205ENST00000466780 CACTINQ8WUQ7 758 aaKnown RBP15.36■□□□□ 0.05
PDZRN3-205ENST00000466780 SETD1BQ9UPS6 1966 aaKnown RBP15.36■□□□□ 0.05
PDZRN3-205ENST00000466780 RESTQ13127 1097 aa15.36■□□□□ 0.05
PDZRN3-205ENST00000466780 G3BP1Q13283 466 aaKnown RBP eCLIP15.36■□□□□ 0.05
PDZRN3-205ENST00000466780 TSGA10IPQ3SY00 556 aa15.36■□□□□ 0.05
PDZRN3-205ENST00000466780 PHF8Q9UPP1 1060 aa15.36■□□□□ 0.05
PDZRN3-205ENST00000466780 SMTNL1A8MU46 457 aa15.35■□□□□ 0.05
PDZRN3-205ENST00000466780 GRM8O00222 908 aa15.35■□□□□ 0.05
PDZRN3-205ENST00000466780 GIGYF1O75420 1035 aaPredicted RBP15.35■□□□□ 0.05
PDZRN3-205ENST00000466780 ZNF530Q6P9A1 599 aaPredicted RBP15.35■□□□□ 0.05
PDZRN3-205ENST00000466780 BICD2Q8TD16 824 aa15.35■□□□□ 0.05
PDZRN3-205ENST00000466780 LMO7Q8WWI1 1683 aa15.35■□□□□ 0.05
PDZRN3-205ENST00000466780 TAF5LO75529 589 aa15.35■□□□□ 0.05
PDZRN3-205ENST00000466780 TNNT1P13805 278 aa15.35■□□□□ 0.05
PDZRN3-205ENST00000466780 AKAP4Q5JQC9 854 aa15.35■□□□□ 0.05
PDZRN3-205ENST00000466780 EDC3Q96F86 508 aaKnown RBP15.35■□□□□ 0.05
PDZRN3-205ENST00000466780 SIL1Q9H173 461 aa15.35■□□□□ 0.05
PDZRN3-205ENST00000466780 COL15A1P39059 1388 aa15.35■□□□□ 0.05
PDZRN3-205ENST00000466780 UTYO14607 1347 aa15.34■□□□□ 0.05
PDZRN3-205ENST00000466780 FER1L4A9Z1Z3 1794 aa15.34■□□□□ 0.05
PDZRN3-205ENST00000466780 BRF1Q92994 677 aa15.34■□□□□ 0.05
PDZRN3-205ENST00000466780 GTF3C6Q969F1 213 aa15.34■□□□□ 0.05
PDZRN3-205ENST00000466780 DDX11Q96FC9 970 aa15.34■□□□□ 0.05
PDZRN3-205ENST00000466780 HMG20BQ9P0W2 317 aa15.34■□□□□ 0.05
PDZRN3-205ENST00000466780 CLIP2Q9UDT6 1046 aa15.34■□□□□ 0.05
PDZRN3-205ENST00000466780 NAA30Q147X3 362 aaPredicted RBP15.34■□□□□ 0.05
PDZRN3-205ENST00000466780 LINS1Q8NG48 757 aa15.34■□□□□ 0.05
PDZRN3-205ENST00000466780 KLHDC4Q8TBB5 520 aa15.34■□□□□ 0.05
PDZRN3-205ENST00000466780 LRRC59Q96AG4 307 aaKnown RBP15.34■□□□□ 0.05
PDZRN3-205ENST00000466780 HDAC5Q9UQL6 1122 aa15.34■□□□□ 0.05
PDZRN3-205ENST00000466780 HEG1Q9ULI3 1381 aa15.34■□□□□ 0.05
PDZRN3-205ENST00000466780 RGPD2P0DJD1 1756 aa15.34■□□□□ 0.05
PDZRN3-205ENST00000466780 TRHP20396 242 aaPredicted RBP15.33■□□□□ 0.05
PDZRN3-205ENST00000466780 SYCP1Q15431 976 aa15.33■□□□□ 0.05
PDZRN3-205ENST00000466780 USPL1Q5W0Q7 1092 aa15.33■□□□□ 0.05
PDZRN3-205ENST00000466780 RNMTO43148 476 aaKnown RBP15.33■□□□□ 0.04
PDZRN3-205ENST00000466780 IQCB1Q15051 598 aa15.33■□□□□ 0.04
PDZRN3-205ENST00000466780 ESCO1Q5FWF5 840 aa15.33■□□□□ 0.04
PDZRN3-205ENST00000466780 PXDNQ92626 1479 aa15.32■□□□□ 0.04
PDZRN3-205ENST00000466780 PSME1Q06323 249 aa15.32■□□□□ 0.04
PDZRN3-205ENST00000466780 NFAT5O94916 1531 aa15.32■□□□□ 0.04
PDZRN3-205ENST00000466780 CDC25BP30305 580 aa15.32■□□□□ 0.04
PDZRN3-205ENST00000466780 C11orf57Q6ZUT1 292 aaPredicted RBP15.32■□□□□ 0.04
PDZRN3-205ENST00000466780 ARID5BQ14865 1188 aa15.31■□□□□ 0.04
PDZRN3-205ENST00000466780 FEZ1Q99689 392 aa15.31■□□□□ 0.04
PDZRN3-205ENST00000466780 CTNNA3Q9UI47 895 aa15.31■□□□□ 0.04
PDZRN3-205ENST00000466780 CHGBP05060 677 aa15.3■□□□□ 0.04
PDZRN3-205ENST00000466780 IGKV5-2P06315 115 aa15.3■□□□□ 0.04
PDZRN3-205ENST00000466780 ADD1P35611 737 aaKnown RBP15.3■□□□□ 0.04
PDZRN3-205ENST00000466780 TPD52L1Q16890 204 aaPredicted RBP15.3■□□□□ 0.04
PDZRN3-205ENST00000466780 PLEKHO1Q53GL0 409 aaPredicted RBP15.3■□□□□ 0.04
PDZRN3-205ENST00000466780 SARM1Q6SZW1 724 aa15.3■□□□□ 0.04
PDZRN3-205ENST00000466780 PAXBP1Q9Y5B6 917 aa15.3■□□□□ 0.04
PDZRN3-205ENST00000466780 MRC1P22897 1456 aa15.3■□□□□ 0.04
PDZRN3-205ENST00000466780 AIMP1Q12904 312 aaKnown RBP15.3■□□□□ 0.04
PDZRN3-205ENST00000466780 Q6ZUG5 572 aa15.3■□□□□ 0.04
PDZRN3-205ENST00000466780 ANKLE2Q86XL3 938 aa15.3■□□□□ 0.04
PDZRN3-205ENST00000466780 LRRC8AQ8IWT6 810 aa15.3■□□□□ 0.04
PDZRN3-205ENST00000466780 CCDC112Q8NEF3 446 aa15.3■□□□□ 0.04
PDZRN3-205ENST00000466780 NEK1Q96PY6 1258 aa15.3■□□□□ 0.04
PDZRN3-205ENST00000466780 USP27XA6NNY8 438 aa15.3■□□□□ 0.04
PDZRN3-205ENST00000466780 CAVIN2O95810 425 aa15.3■□□□□ 0.04
PDZRN3-205ENST00000466780 EPHA10Q5JZY3 1008 aa15.3■□□□□ 0.04
PDZRN3-205ENST00000466780 LMOD2Q6P5Q4 547 aa15.3■□□□□ 0.04
PDZRN3-205ENST00000466780 CEBPZQ03701 1054 aaKnown RBP15.29■□□□□ 0.04
PDZRN3-205ENST00000466780 KRT32Q14532 448 aa15.29■□□□□ 0.04
PDZRN3-205ENST00000466780 PDIA6Q15084 440 aa15.29■□□□□ 0.04
PDZRN3-205ENST00000466780 FTOQ9C0B1 505 aaKnown RBP eCLIP15.29■□□□□ 0.04
PDZRN3-205ENST00000466780 OGFRQ9NZT2 677 aa15.29■□□□□ 0.04
PDZRN3-205ENST00000466780 NDUFB9Q9Y6M9 179 aa15.29■□□□□ 0.04
PDZRN3-205ENST00000466780 H3BQV1 296 aa15.29■□□□□ 0.04
PDZRN3-205ENST00000466780 IGSF3O75054 1194 aa15.29■□□□□ 0.04
PDZRN3-205ENST00000466780 KIF20AO95235 890 aa15.29■□□□□ 0.04
PDZRN3-205ENST00000466780 SCRN1Q12765 414 aa15.29■□□□□ 0.04
PDZRN3-205ENST00000466780 IFFO2Q5TF58 517 aa15.29■□□□□ 0.04
PDZRN3-205ENST00000466780 CCDC129Q6ZRS4 1044 aa15.29■□□□□ 0.04
PDZRN3-205ENST00000466780 GOLPH3LQ9H4A5 285 aa15.29■□□□□ 0.04
PDZRN3-205ENST00000466780 ZSCAN16Q9H4T2 348 aaPredicted RBP15.29■□□□□ 0.04
PDZRN3-205ENST00000466780 CEP135Q66GS9 1140 aa15.28■□□□□ 0.04
PDZRN3-205ENST00000466780 SMARCC2Q8TAQ2 1214 aa15.28■□□□□ 0.04
PDZRN3-205ENST00000466780 MRFAP1L1Q96HT8 127 aa15.28■□□□□ 0.04
PDZRN3-205ENST00000466780 DBNLQ9UJU6 430 aaKnown RBP15.28■□□□□ 0.04
PDZRN3-205ENST00000466780 CFAP45Q9UL16 551 aa15.28■□□□□ 0.04
PDZRN3-205ENST00000466780 A0A087WWV3 80 aa15.28■□□□□ 0.04
PDZRN3-205ENST00000466780 CYP21A2P08686 494 aa15.28■□□□□ 0.04
PDZRN3-205ENST00000466780 RBM6P78332 1123 aaKnown RBP15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms