RNA–Protein interactions for RNA: ENST00000463943.1

BCAS4-204, Transcript of breast carcinoma amplified sequence 4, humanhuman

TSL 1 (best)

Gene BCAS4, Length 1,498 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCAS4-204ENST00000463943 MYH3P11055 1940 aa24.59■■□□□ 1.53
BCAS4-204ENST00000463943 COL4A1P02462 1669 aa24.59■■□□□ 1.53
BCAS4-204ENST00000463943 IPO8O15397 1037 aaKnown RBP24.58■■□□□ 1.53
BCAS4-204ENST00000463943 CTSWP56202 376 aa24.58■■□□□ 1.53
BCAS4-204ENST00000463943 ATF7IPQ6VMQ6 1270 aa24.58■■□□□ 1.53
BCAS4-204ENST00000463943 CHD4Q14839 1912 aa24.58■■□□□ 1.53
BCAS4-204ENST00000463943 PPEF1O14829 653 aaPredicted RBP24.58■■□□□ 1.52
BCAS4-204ENST00000463943 NBPF7P0C2Y1 421 aaPredicted RBP24.58■■□□□ 1.52
BCAS4-204ENST00000463943 RASSF7Q02833 373 aa24.58■■□□□ 1.52
BCAS4-204ENST00000463943 CCDC152Q4G0S7 254 aa24.58■■□□□ 1.52
BCAS4-204ENST00000463943 CLUAP1Q96AJ1 413 aa24.58■■□□□ 1.52
BCAS4-204ENST00000463943 SEC31BQ9NQW1 1179 aa24.58■■□□□ 1.52
BCAS4-204ENST00000463943 GRAPQ13588 217 aa24.57■■□□□ 1.52
BCAS4-204ENST00000463943 TTLL11Q8NHH1 800 aa24.57■■□□□ 1.52
BCAS4-204ENST00000463943 GRAPLQ8TC17 118 aaPredicted RBP24.57■■□□□ 1.52
BCAS4-204ENST00000463943 CELF1Q92879 486 aaKnown RBP24.57■■□□□ 1.52
BCAS4-204ENST00000463943 CCT4P50991 539 aaKnown RBP24.56■■□□□ 1.52
BCAS4-204ENST00000463943 ZKSCAN2Q63HK3 967 aa24.56■■□□□ 1.52
BCAS4-204ENST00000463943 PLA2G12BQ9BX93 195 aa24.56■■□□□ 1.52
BCAS4-204ENST00000463943 NFKBIEO00221 500 aa24.55■■□□□ 1.52
BCAS4-204ENST00000463943 RCAN3Q9UKA8 241 aa24.55■■□□□ 1.52
BCAS4-204ENST00000463943 FER1L6Q2WGJ9 1857 aa24.55■■□□□ 1.52
BCAS4-204ENST00000463943 CCDC93Q567U6 631 aa24.54■■□□□ 1.52
BCAS4-204ENST00000463943 USP44Q9H0E7 712 aa24.54■■□□□ 1.52
BCAS4-204ENST00000463943 GREM2Q9H772 168 aa24.54■■□□□ 1.52
BCAS4-204ENST00000463943 UTYO14607 1347 aa24.54■■□□□ 1.52
BCAS4-204ENST00000463943 EPHA10Q5JZY3 1008 aa24.53■■□□□ 1.52
BCAS4-204ENST00000463943 SOGA3Q5TF21 947 aa24.53■■□□□ 1.52
BCAS4-204ENST00000463943 SUCLG2Q96I99 432 aa24.53■■□□□ 1.52
BCAS4-204ENST00000463943 BBOX1O75936 387 aa24.52■■□□□ 1.52
BCAS4-204ENST00000463943 FOXO4P98177 505 aa24.52■■□□□ 1.52
BCAS4-204ENST00000463943 INTS3Q68E01 1043 aaKnown RBP24.51■■□□□ 1.51
BCAS4-204ENST00000463943 ATP6V0A2Q9Y487 856 aa24.51■■□□□ 1.51
BCAS4-204ENST00000463943 SNED1Q8TER0 1413 aa24.51■■□□□ 1.51
BCAS4-204ENST00000463943 CSF1RP07333 972 aa24.51■■□□□ 1.51
BCAS4-204ENST00000463943 PRELPP51888 382 aa24.51■■□□□ 1.51
BCAS4-204ENST00000463943 FAM161AQ3B820 660 aa24.51■■□□□ 1.51
BCAS4-204ENST00000463943 KAZALD1Q96I82 304 aa24.51■■□□□ 1.51
BCAS4-204ENST00000463943 RPS8P62241 208 aaKnown RBP24.5■■□□□ 1.51
BCAS4-204ENST00000463943 TAOK3Q9H2K8 898 aa24.5■■□□□ 1.51
BCAS4-204ENST00000463943 SBF1O95248 1867 aa24.49■■□□□ 1.51
BCAS4-204ENST00000463943 YY1P25490 414 aa24.49■■□□□ 1.51
BCAS4-204ENST00000463943 LMBR1LQ6UX01 489 aa24.49■■□□□ 1.51
BCAS4-204ENST00000463943 FTSJ3Q8IY81 847 aaKnown RBP24.49■■□□□ 1.51
BCAS4-204ENST00000463943 CHMP3Q9Y3E7 222 aa24.49■■□□□ 1.51
BCAS4-204ENST00000463943 ITGA6P23229 1130 aa24.48■■□□□ 1.51
BCAS4-204ENST00000463943 SP8Q8IXZ3 490 aa24.48■■□□□ 1.51
BCAS4-204ENST00000463943 RTKN2Q8IZC4 609 aa24.48■■□□□ 1.51
BCAS4-204ENST00000463943 TMEM57Q8N5G2 664 aa24.48■■□□□ 1.51
BCAS4-204ENST00000463943 TMX4Q9H1E5 349 aaPredicted RBP24.48■■□□□ 1.51
BCAS4-204ENST00000463943 BICC1Q9H694 974 aaKnown RBP24.48■■□□□ 1.51
BCAS4-204ENST00000463943 RTL9Q8NET4 1388 aa24.48■■□□□ 1.51
BCAS4-204ENST00000463943 C9orf131Q5VYM1 1079 aa24.47■■□□□ 1.51
BCAS4-204ENST00000463943 CC2D2BQ6DHV5 1058 aa24.47■■□□□ 1.51
BCAS4-204ENST00000463943 ANKRD18AQ8IVF6 992 aa24.47■■□□□ 1.51
BCAS4-204ENST00000463943 DZIP1LQ8IYY4 767 aaKnown RBP24.47■■□□□ 1.51
BCAS4-204ENST00000463943 CDC5LQ99459 802 aaKnown RBP24.47■■□□□ 1.51
BCAS4-204ENST00000463943 MEIS3Q99687 375 aa24.47■■□□□ 1.51
BCAS4-204ENST00000463943 RNF181Q9P0P0 153 aa24.47■■□□□ 1.51
BCAS4-204ENST00000463943 CCDC88AQ3V6T2 1871 aa24.47■■□□□ 1.51
BCAS4-204ENST00000463943 SPEF2Q9C093 1822 aa24.46■■□□□ 1.51
BCAS4-204ENST00000463943 LRRC37AA6NMS7 1700 aa24.46■■□□□ 1.51
BCAS4-204ENST00000463943 LTBP3Q9NS15 1303 aa24.46■■□□□ 1.51
BCAS4-204ENST00000463943 PLIN1O60240 522 aa24.46■■□□□ 1.51
BCAS4-204ENST00000463943 RLBP1P12271 317 aa24.46■■□□□ 1.51
BCAS4-204ENST00000463943 FKBP4Q02790 459 aaKnown RBP eCLIP24.46■■□□□ 1.51
BCAS4-204ENST00000463943 UBTFL1P0CB47 393 aaPredicted RBP24.45■■□□□ 1.51
BCAS4-204ENST00000463943 TMC4Q7Z404 712 aa24.45■■□□□ 1.51
BCAS4-204ENST00000463943 LMNB1P20700 586 aa24.45■■□□□ 1.5
BCAS4-204ENST00000463943 ZNF277Q9NRM2 450 aaPredicted RBP24.45■■□□□ 1.5
BCAS4-204ENST00000463943 PSMD1Q99460 953 aa24.44■■□□□ 1.5
BCAS4-204ENST00000463943 ANKRD18BA2A2Z9 1011 aa24.43■■□□□ 1.5
BCAS4-204ENST00000463943 IFIT5Q13325 482 aaKnown RBP24.43■■□□□ 1.5
BCAS4-204ENST00000463943 DPP8Q6V1X1 898 aaPredicted RBP24.43■■□□□ 1.5
BCAS4-204ENST00000463943 MPNDQ8N594 471 aa24.43■■□□□ 1.5
BCAS4-204ENST00000463943 ANKRD44Q8N8A2 993 aa24.43■■□□□ 1.5
BCAS4-204ENST00000463943 PANK1Q8TE04 598 aa24.43■■□□□ 1.5
BCAS4-204ENST00000463943 IGHMBP2P38935 993 aaKnown RBP24.42■■□□□ 1.5
BCAS4-204ENST00000463943 CCDC57Q2TAC2 916 aa24.42■■□□□ 1.5
BCAS4-204ENST00000463943 RABL6Q3YEC7 729 aaPredicted RBP24.42■■□□□ 1.5
BCAS4-204ENST00000463943 GRIPAP1Q4V328 841 aa24.42■■□□□ 1.5
BCAS4-204ENST00000463943 ITPRIPQ8IWB1 547 aa24.42■■□□□ 1.5
BCAS4-204ENST00000463943 NSFL1CQ9UNZ2 370 aaKnown RBP24.42■■□□□ 1.5
BCAS4-204ENST00000463943 GPSM2P81274 684 aa24.41■■□□□ 1.5
BCAS4-204ENST00000463943 BSDC1Q9NW68 430 aaPredicted RBP24.41■■□□□ 1.5
BCAS4-204ENST00000463943 LRRFIP2Q9Y608 721 aaKnown RBP24.41■■□□□ 1.5
BCAS4-204ENST00000463943 ZNF594Q96JF6 807 aaPredicted RBP24.4■■□□□ 1.5
BCAS4-204ENST00000463943 MPHOSPH8Q99549 860 aa24.4■■□□□ 1.5
BCAS4-204ENST00000463943 DUOX1Q9NRD9 1551 aa24.4■■□□□ 1.5
BCAS4-204ENST00000463943 TIAM2Q8IVF5 1701 aa24.39■■□□□ 1.5
BCAS4-204ENST00000463943 GNAI3P08754 354 aa24.38■■□□□ 1.49
BCAS4-204ENST00000463943 IARSP41252 1262 aaKnown RBP24.38■■□□□ 1.49
BCAS4-204ENST00000463943 DICER1Q9UPY3 1922 aaKnown RBP24.38■■□□□ 1.49
BCAS4-204ENST00000463943 LTBP1Q14766 1721 aa24.38■■□□□ 1.49
BCAS4-204ENST00000463943 TAF7LQ5H9L4 462 aa24.38■■□□□ 1.49
BCAS4-204ENST00000463943 RTFDC1Q9BY42 306 aaPredicted RBP24.38■■□□□ 1.49
BCAS4-204ENST00000463943 ANKIB1Q9P2G1 1089 aa24.38■■□□□ 1.49
BCAS4-204ENST00000463943 MINPP1Q9UNW1 487 aa24.38■■□□□ 1.49
BCAS4-204ENST00000463943 POLLQ9UGP5 575 aa24.37■■□□□ 1.49
BCAS4-204ENST00000463943 MS4A1P11836 297 aa24.36■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms