RNA–Protein interactions for RNA: ENST00000463060.5

COL6A1-202, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 5

Gene COL6A1, Length 863 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-202ENST00000463060 GTF2E1P29083 439 aaPredicted RBP17.9■□□□□ 0.46
COL6A1-202ENST00000463060 PARP3Q9Y6F1 533 aa17.9■□□□□ 0.46
COL6A1-202ENST00000463060 RTL9Q8NET4 1388 aa17.9■□□□□ 0.46
COL6A1-202ENST00000463060 HMMRO75330 724 aa17.89■□□□□ 0.45
COL6A1-202ENST00000463060 SMC5Q8IY18 1101 aa17.89■□□□□ 0.45
COL6A1-202ENST00000463060 CCDC24Q8N4L8 307 aa17.89■□□□□ 0.45
COL6A1-202ENST00000463060 MTFR1LQ9H019 292 aa17.89■□□□□ 0.45
COL6A1-202ENST00000463060 NOP58Q9Y2X3 529 aaKnown RBP17.89■□□□□ 0.45
COL6A1-202ENST00000463060 PSDA5PKW4 1024 aaPredicted RBP17.88■□□□□ 0.45
COL6A1-202ENST00000463060 PTPN12Q05209 780 aaKnown RBP17.88■□□□□ 0.45
COL6A1-202ENST00000463060 NLRP3Q96P20 1036 aa17.88■□□□□ 0.45
COL6A1-202ENST00000463060 SGIP1Q9BQI5 828 aa17.88■□□□□ 0.45
COL6A1-202ENST00000463060 COPRSQ9NQ92 184 aa17.88■□□□□ 0.45
COL6A1-202ENST00000463060 ZBTB7AO95365 584 aa17.87■□□□□ 0.45
COL6A1-202ENST00000463060 CRY2Q49AN0 593 aa17.87■□□□□ 0.45
COL6A1-202ENST00000463060 BRIP1Q9BX63 1249 aa17.87■□□□□ 0.45
COL6A1-202ENST00000463060 GREM2Q9H772 168 aa17.87■□□□□ 0.45
COL6A1-202ENST00000463060 TNRC6CQ9HCJ0 1690 aaKnown RBP17.87■□□□□ 0.45
COL6A1-202ENST00000463060 ANKRD31Q8N7Z5 1873 aa17.86■□□□□ 0.45
COL6A1-202ENST00000463060 ST5P78524 1137 aa17.86■□□□□ 0.45
COL6A1-202ENST00000463060 FAM161AQ3B820 660 aa17.86■□□□□ 0.45
COL6A1-202ENST00000463060 CENPQQ7L2Z9 268 aaPredicted RBP17.86■□□□□ 0.45
COL6A1-202ENST00000463060 CCDC152Q4G0S7 254 aa17.85■□□□□ 0.45
COL6A1-202ENST00000463060 GCC1Q96CN9 775 aa17.85■□□□□ 0.45
COL6A1-202ENST00000463060 PA2G4Q9UQ80 394 aaKnown RBP17.85■□□□□ 0.45
COL6A1-202ENST00000463060 ITGA6P23229 1130 aa17.84■□□□□ 0.45
COL6A1-202ENST00000463060 IFIT5Q13325 482 aaKnown RBP17.84■□□□□ 0.45
COL6A1-202ENST00000463060 CCDC57Q2TAC2 916 aa17.84■□□□□ 0.45
COL6A1-202ENST00000463060 KLHDC4Q8TBB5 520 aa17.84■□□□□ 0.45
COL6A1-202ENST00000463060 CCDC85AQ96PX6 553 aaPredicted RBP17.84■□□□□ 0.45
COL6A1-202ENST00000463060 SEC31BQ9NQW1 1179 aa17.84■□□□□ 0.45
COL6A1-202ENST00000463060 ATF5Q9Y2D1 282 aaPredicted RBP17.84■□□□□ 0.45
COL6A1-202ENST00000463060 HOXA10P31260 410 aaPredicted RBP17.83■□□□□ 0.44
COL6A1-202ENST00000463060 PTGER2P43116 358 aa17.83■□□□□ 0.44
COL6A1-202ENST00000463060 ANKRD18BA2A2Z9 1011 aa17.82■□□□□ 0.44
COL6A1-202ENST00000463060 NPHP1O15259 732 aa17.82■□□□□ 0.44
COL6A1-202ENST00000463060 SURF6O75683 361 aaKnown RBP17.82■□□□□ 0.44
COL6A1-202ENST00000463060 ATG9AQ7Z3C6 839 aa17.82■□□□□ 0.44
COL6A1-202ENST00000463060 ZNF594Q96JF6 807 aaPredicted RBP17.82■□□□□ 0.44
COL6A1-202ENST00000463060 FBXO3Q9UK99 471 aa17.82■□□□□ 0.44
COL6A1-202ENST00000463060 EXOC6BQ9Y2D4 811 aa17.82■□□□□ 0.44
COL6A1-202ENST00000463060 CHMP3Q9Y3E7 222 aa17.82■□□□□ 0.44
COL6A1-202ENST00000463060 COL4A1P02462 1669 aa17.82■□□□□ 0.44
COL6A1-202ENST00000463060 C10orf71Q711Q0 1435 aa17.81■□□□□ 0.44
COL6A1-202ENST00000463060 RAB11FIP3O75154 756 aa17.8■□□□□ 0.44
COL6A1-202ENST00000463060 CIAO1O76071 339 aa17.8■□□□□ 0.44
COL6A1-202ENST00000463060 SASH1O94885 1247 aa17.8■□□□□ 0.44
COL6A1-202ENST00000463060 SRGNP10124 158 aa17.8■□□□□ 0.44
COL6A1-202ENST00000463060 PDE6BP35913 854 aa17.8■□□□□ 0.44
COL6A1-202ENST00000463060 NUCB1Q02818 461 aa17.8■□□□□ 0.44
COL6A1-202ENST00000463060 PUS3Q9BZE2 481 aaKnown RBP17.8■□□□□ 0.44
COL6A1-202ENST00000463060 RIPOR2Q9Y4F9 1068 aa17.8■□□□□ 0.44
COL6A1-202ENST00000463060 KIF13BQ9NQT8 1826 aa17.79■□□□□ 0.44
COL6A1-202ENST00000463060 EYA2O00167 538 aa17.79■□□□□ 0.44
COL6A1-202ENST00000463060 LRRC24Q50LG9 513 aa17.79■□□□□ 0.44
COL6A1-202ENST00000463060 HSP90AB4PQ58FF6 505 aa17.79■□□□□ 0.44
COL6A1-202ENST00000463060 CRAMP1Q96RY5 1269 aa17.79■□□□□ 0.44
COL6A1-202ENST00000463060 TAF1P21675 1872 aa17.79■□□□□ 0.44
COL6A1-202ENST00000463060 LRP5O75197 1615 aa17.79■□□□□ 0.44
COL6A1-202ENST00000463060 POLD1P28340 1107 aa17.78■□□□□ 0.44
COL6A1-202ENST00000463060 RPS8P62241 208 aaKnown RBP17.78■□□□□ 0.44
COL6A1-202ENST00000463060 G3BP1Q13283 466 aaKnown RBP eCLIP17.78■□□□□ 0.44
COL6A1-202ENST00000463060 LDHAL6AQ6ZMR3 332 aa17.78■□□□□ 0.44
COL6A1-202ENST00000463060 DDX46Q7L014 1031 aaKnown RBP17.78■□□□□ 0.44
COL6A1-202ENST00000463060 CELF1Q92879 486 aaKnown RBP17.78■□□□□ 0.44
COL6A1-202ENST00000463060 CDC5LQ99459 802 aaKnown RBP17.78■□□□□ 0.44
COL6A1-202ENST00000463060 PDZRN3Q9UPQ7 1066 aa17.78■□□□□ 0.44
COL6A1-202ENST00000463060 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.78■□□□□ 0.44
COL6A1-202ENST00000463060 IL15P40933 162 aaPredicted RBP17.77■□□□□ 0.44
COL6A1-202ENST00000463060 RHPN1Q8TCX5 695 aa17.77■□□□□ 0.44
COL6A1-202ENST00000463060 SIL1Q9H173 461 aa17.77■□□□□ 0.44
COL6A1-202ENST00000463060 BSDC1Q9NW68 430 aaPredicted RBP17.77■□□□□ 0.44
COL6A1-202ENST00000463060 COL11A2P13942 1736 aaPredicted RBP17.76■□□□□ 0.43
COL6A1-202ENST00000463060 NPR1P16066 1061 aa17.76■□□□□ 0.43
COL6A1-202ENST00000463060 GRAPQ13588 217 aa17.76■□□□□ 0.43
COL6A1-202ENST00000463060 ANKRD45Q5TZF3 282 aa17.76■□□□□ 0.43
COL6A1-202ENST00000463060 ERC1Q8IUD2 1116 aa17.76■□□□□ 0.43
COL6A1-202ENST00000463060 ANKRD18AQ8IVF6 992 aa17.76■□□□□ 0.43
COL6A1-202ENST00000463060 GRAPLQ8TC17 118 aaPredicted RBP17.76■□□□□ 0.43
COL6A1-202ENST00000463060 KIF1BPQ96EK5 621 aa17.76■□□□□ 0.43
COL6A1-202ENST00000463060 SPON1Q9HCB6 807 aa17.76■□□□□ 0.43
COL6A1-202ENST00000463060 KCNA3P22001 575 aa17.75■□□□□ 0.43
COL6A1-202ENST00000463060 TAF7LQ5H9L4 462 aa17.75■□□□□ 0.43
COL6A1-202ENST00000463060 STYK1Q6J9G0 422 aa17.75■□□□□ 0.43
COL6A1-202ENST00000463060 CHD1LQ86WJ1 897 aa17.75■□□□□ 0.43
COL6A1-202ENST00000463060 C2CD5Q86YS7 1000 aa17.75■□□□□ 0.43
COL6A1-202ENST00000463060 RPGRQ92834 1020 aaKnown RBP17.75■□□□□ 0.43
COL6A1-202ENST00000463060 MASTLQ96GX5 879 aa17.75■□□□□ 0.43
COL6A1-202ENST00000463060 RBM17Q96I25 401 aaKnown RBP17.75■□□□□ 0.43
COL6A1-202ENST00000463060 LRRCC1Q9C099 1032 aa17.75■□□□□ 0.43
COL6A1-202ENST00000463060 H0YIN7 160 aa17.74■□□□□ 0.43
COL6A1-202ENST00000463060 SMARCA5O60264 1052 aaPredicted RBP17.74■□□□□ 0.43
COL6A1-202ENST00000463060 BBOX1O75936 387 aa17.74■□□□□ 0.43
COL6A1-202ENST00000463060 IGHMBP2P38935 993 aaKnown RBP17.74■□□□□ 0.43
COL6A1-202ENST00000463060 VGLL2Q8N8G2 317 aa17.74■□□□□ 0.43
COL6A1-202ENST00000463060 KIAA1551Q9HCM1 1747 aa17.74■□□□□ 0.43
COL6A1-202ENST00000463060 PDE4AP27815 886 aa17.73■□□□□ 0.43
COL6A1-202ENST00000463060 CHRNA5P30532 468 aa17.73■□□□□ 0.43
COL6A1-202ENST00000463060 TGFB2P61812 414 aa17.73■□□□□ 0.43
COL6A1-202ENST00000463060 TFCP2Q12800 502 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms