RNA–Protein interactions for RNA: ENST00000462733.5

ATPAF2-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 1 (best)

Gene ATPAF2, Length 1,737 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-202ENST00000462733 PDE8AO60658 829 aa22.34■■□□□ 1.17
ATPAF2-202ENST00000462733 FOXO4P98177 505 aa22.34■■□□□ 1.17
ATPAF2-202ENST00000462733 PDZRN3Q9UPQ7 1066 aa22.34■■□□□ 1.17
ATPAF2-202ENST00000462733 NRXN2Q9P2S2 1712 aa22.33■■□□□ 1.17
ATPAF2-202ENST00000462733 CEP85Q6P2H3 762 aa22.33■■□□□ 1.17
ATPAF2-202ENST00000462733 ANKRD44Q8N8A2 993 aa22.33■■□□□ 1.17
ATPAF2-202ENST00000462733 CCDC85AQ96PX6 553 aaPredicted RBP22.33■■□□□ 1.17
ATPAF2-202ENST00000462733 PLA2G12BQ9BX93 195 aa22.33■■□□□ 1.17
ATPAF2-202ENST00000462733 CHMP3Q9Y3E7 222 aa22.33■■□□□ 1.17
ATPAF2-202ENST00000462733 LAMB2P55268 1798 aa22.33■■□□□ 1.16
ATPAF2-202ENST00000462733 HSP90B1P14625 803 aaKnown RBP22.32■■□□□ 1.16
ATPAF2-202ENST00000462733 POLD1P28340 1107 aa22.32■■□□□ 1.16
ATPAF2-202ENST00000462733 SLC10A5Q5PT55 438 aa22.32■■□□□ 1.16
ATPAF2-202ENST00000462733 LMBR1LQ6UX01 489 aa22.32■■□□□ 1.16
ATPAF2-202ENST00000462733 CTSWP56202 376 aa22.31■■□□□ 1.16
ATPAF2-202ENST00000462733 C3orf67Q6ZVT6 689 aa22.31■■□□□ 1.16
ATPAF2-202ENST00000462733 NLRP3Q96P20 1036 aa22.3■■□□□ 1.16
ATPAF2-202ENST00000462733 TNRC6CQ9HCJ0 1690 aaKnown RBP22.3■■□□□ 1.16
ATPAF2-202ENST00000462733 PNMA6EA0A0J9YXQ4 647 aa22.29■■□□□ 1.16
ATPAF2-202ENST00000462733 ATP8B2P98198 1209 aa22.29■■□□□ 1.16
ATPAF2-202ENST00000462733 RABL6Q3YEC7 729 aaPredicted RBP22.29■■□□□ 1.16
ATPAF2-202ENST00000462733 SIRT2Q8IXJ6 389 aa22.29■■□□□ 1.16
ATPAF2-202ENST00000462733 RPAP2Q8IXW5 612 aaPredicted RBP22.29■■□□□ 1.16
ATPAF2-202ENST00000462733 BCL11AQ9H165 835 aa22.29■■□□□ 1.16
ATPAF2-202ENST00000462733 UPF2Q9HAU5 1272 aaKnown RBP22.29■■□□□ 1.16
ATPAF2-202ENST00000462733 SRGAP3O43295 1099 aa22.28■■□□□ 1.16
ATPAF2-202ENST00000462733 TTLL11Q8NHH1 800 aa22.28■■□□□ 1.16
ATPAF2-202ENST00000462733 CSF1RP07333 972 aa22.28■■□□□ 1.16
ATPAF2-202ENST00000462733 ANKRD31Q8N7Z5 1873 aa22.28■■□□□ 1.16
ATPAF2-202ENST00000462733 GREM2Q9H772 168 aa22.27■■□□□ 1.16
ATPAF2-202ENST00000462733 MTX1Q13505 466 aa22.26■■□□□ 1.15
ATPAF2-202ENST00000462733 BECN1Q14457 450 aa22.26■■□□□ 1.15
ATPAF2-202ENST00000462733 CCDC152Q4G0S7 254 aa22.26■■□□□ 1.15
ATPAF2-202ENST00000462733 BRIP1Q9BX63 1249 aa22.26■■□□□ 1.15
ATPAF2-202ENST00000462733 PTGER2P43116 358 aa22.26■■□□□ 1.15
ATPAF2-202ENST00000462733 SMC5Q8IY18 1101 aa22.26■■□□□ 1.15
ATPAF2-202ENST00000462733 SGIP1Q9BQI5 828 aa22.26■■□□□ 1.15
ATPAF2-202ENST00000462733 SPON1Q9HCB6 807 aa22.26■■□□□ 1.15
ATPAF2-202ENST00000462733 SF3B3Q15393 1217 aaKnown RBP22.25■■□□□ 1.15
ATPAF2-202ENST00000462733 RIC1Q4ADV7 1423 aa22.25■■□□□ 1.15
ATPAF2-202ENST00000462733 HMMRO75330 724 aa22.24■■□□□ 1.15
ATPAF2-202ENST00000462733 ITGA6P23229 1130 aa22.23■■□□□ 1.15
ATPAF2-202ENST00000462733 IFIT5Q13325 482 aaKnown RBP22.23■■□□□ 1.15
ATPAF2-202ENST00000462733 CCDC57Q2TAC2 916 aa22.23■■□□□ 1.15
ATPAF2-202ENST00000462733 SSH3Q8TE77 659 aa22.23■■□□□ 1.15
ATPAF2-202ENST00000462733 PDE6BP35913 854 aa22.23■■□□□ 1.15
ATPAF2-202ENST00000462733 POLA2Q14181 598 aa22.23■■□□□ 1.15
ATPAF2-202ENST00000462733 KLHDC4Q8TBB5 520 aa22.23■■□□□ 1.15
ATPAF2-202ENST00000462733 SEC31BQ9NQW1 1179 aa22.23■■□□□ 1.15
ATPAF2-202ENST00000462733 TAF1P21675 1872 aa22.23■■□□□ 1.15
ATPAF2-202ENST00000462733 C10orf71Q711Q0 1435 aa22.22■■□□□ 1.15
ATPAF2-202ENST00000462733 RPGRQ92834 1020 aaKnown RBP22.22■■□□□ 1.15
ATPAF2-202ENST00000462733 TBC1D32Q96NH3 1257 aa22.22■■□□□ 1.15
ATPAF2-202ENST00000462733 PA2G4Q9UQ80 394 aaKnown RBP22.22■■□□□ 1.15
ATPAF2-202ENST00000462733 ANKRD18BA2A2Z9 1011 aa22.21■■□□□ 1.15
ATPAF2-202ENST00000462733 RFX5P48382 616 aaPredicted RBP22.21■■□□□ 1.15
ATPAF2-202ENST00000462733 TAF7LQ5H9L4 462 aa22.21■■□□□ 1.15
ATPAF2-202ENST00000462733 KLHL34Q8N239 644 aa22.21■■□□□ 1.15
ATPAF2-202ENST00000462733 ZNF594Q96JF6 807 aaPredicted RBP22.21■■□□□ 1.15
ATPAF2-202ENST00000462733 PPP1R1BQ9UD71 204 aaPredicted RBP22.21■■□□□ 1.15
ATPAF2-202ENST00000462733 NFKBIBQ15653 356 aa22.2■■□□□ 1.14
ATPAF2-202ENST00000462733 CRY2Q49AN0 593 aa22.2■■□□□ 1.14
ATPAF2-202ENST00000462733 KLRG2A4D1S0 409 aaPredicted RBP22.2■■□□□ 1.14
ATPAF2-202ENST00000462733 DDX46Q7L014 1031 aaKnown RBP22.2■■□□□ 1.14
ATPAF2-202ENST00000462733 C2CD5Q86YS7 1000 aa22.2■■□□□ 1.14
ATPAF2-202ENST00000462733 SEC24BO95487 1268 aa22.19■■□□□ 1.14
ATPAF2-202ENST00000462733 SLC4A3P48751 1232 aa22.19■■□□□ 1.14
ATPAF2-202ENST00000462733 PTPN12Q05209 780 aaKnown RBP22.19■■□□□ 1.14
ATPAF2-202ENST00000462733 SIL1Q9H173 461 aa22.19■■□□□ 1.14
ATPAF2-202ENST00000462733 COL11A2P13942 1736 aaPredicted RBP22.19■■□□□ 1.14
ATPAF2-202ENST00000462733 RTL9Q8NET4 1388 aa22.19■■□□□ 1.14
ATPAF2-202ENST00000462733 SURF6O75683 361 aaKnown RBP22.18■■□□□ 1.14
ATPAF2-202ENST00000462733 CHRNA5P30532 468 aa22.18■■□□□ 1.14
ATPAF2-202ENST00000462733 EXOC6BQ9Y2D4 811 aa22.18■■□□□ 1.14
ATPAF2-202ENST00000462733 H0YIN7 160 aa22.17■■□□□ 1.14
ATPAF2-202ENST00000462733 SRGNP10124 158 aa22.17■■□□□ 1.14
ATPAF2-202ENST00000462733 RBM17Q96I25 401 aaKnown RBP22.17■■□□□ 1.14
ATPAF2-202ENST00000462733 SPEF2Q9C093 1822 aa22.17■■□□□ 1.14
ATPAF2-202ENST00000462733 KIF13BQ9NQT8 1826 aa22.17■■□□□ 1.14
ATPAF2-202ENST00000462733 COL4A1P02462 1669 aa22.17■■□□□ 1.14
ATPAF2-202ENST00000462733 CELF1Q92879 486 aaKnown RBP22.17■■□□□ 1.14
ATPAF2-202ENST00000462733 ZNF622Q969S3 477 aaKnown RBP eCLIP22.17■■□□□ 1.14
ATPAF2-202ENST00000462733 CDC5LQ99459 802 aaKnown RBP22.17■■□□□ 1.14
ATPAF2-202ENST00000462733 APBB1O00213 710 aa22.16■■□□□ 1.14
ATPAF2-202ENST00000462733 DCTPP1Q9H773 170 aa22.16■■□□□ 1.14
ATPAF2-202ENST00000462733 COPRSQ9NQ92 184 aa22.16■■□□□ 1.14
ATPAF2-202ENST00000462733 NPR1P16066 1061 aa22.15■■□□□ 1.14
ATPAF2-202ENST00000462733 IGHMBP2P38935 993 aaKnown RBP22.15■■□□□ 1.14
ATPAF2-202ENST00000462733 OS9Q13438 667 aaPredicted RBP22.15■■□□□ 1.14
ATPAF2-202ENST00000462733 ANKRD18AQ8IVF6 992 aa22.15■■□□□ 1.14
ATPAF2-202ENST00000462733 MASTLQ96GX5 879 aa22.15■■□□□ 1.14
ATPAF2-202ENST00000462733 HOXA10P31260 410 aaPredicted RBP22.14■■□□□ 1.14
ATPAF2-202ENST00000462733 GRAPQ13588 217 aa22.14■■□□□ 1.14
ATPAF2-202ENST00000462733 GRAPLQ8TC17 118 aaPredicted RBP22.14■■□□□ 1.14
ATPAF2-202ENST00000462733 MPHOSPH8Q99549 860 aa22.14■■□□□ 1.14
ATPAF2-202ENST00000462733 PUS3Q9BZE2 481 aaKnown RBP22.14■■□□□ 1.14
ATPAF2-202ENST00000462733 A0A0G2JLW4 131 aa22.14■■□□□ 1.13
ATPAF2-202ENST00000462733 NUCB1Q02818 461 aa22.14■■□□□ 1.13
ATPAF2-202ENST00000462733 G3BP1Q13283 466 aaKnown RBP eCLIP22.14■■□□□ 1.13
ATPAF2-202ENST00000462733 LRRC24Q50LG9 513 aa22.14■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms