RNA–Protein interactions for RNA: ENST00000462715.1

TRAPPC3-205, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 2,428 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-205ENST00000462715 CTIFO43310 598 aaKnown RBP13.81□□□□□ -0.2
TRAPPC3-205ENST00000462715 TPM3P06753 285 aa13.81□□□□□ -0.2
TRAPPC3-205ENST00000462715 ZNF771Q7L3S4 317 aaPredicted RBP13.81□□□□□ -0.2
TRAPPC3-205ENST00000462715 MVPQ14764 893 aaKnown RBP13.8□□□□□ -0.2
TRAPPC3-205ENST00000462715 PROSER3Q2NL68 480 aa13.8□□□□□ -0.2
TRAPPC3-205ENST00000462715 CAVIN1Q6NZI2 390 aaKnown RBP13.8□□□□□ -0.2
TRAPPC3-205ENST00000462715 PDGFDQ9GZP0 370 aaPredicted RBP13.8□□□□□ -0.2
TRAPPC3-205ENST00000462715 MTFR1LQ9H019 292 aa13.8□□□□□ -0.2
TRAPPC3-205ENST00000462715 BCL2L12Q9HB09 334 aa13.8□□□□□ -0.2
TRAPPC3-205ENST00000462715 ANXA1P04083 346 aa13.8□□□□□ -0.2
TRAPPC3-205ENST00000462715 TIGD1Q96MW7 591 aa13.8□□□□□ -0.2
TRAPPC3-205ENST00000462715 KIF2CQ99661 725 aa13.8□□□□□ -0.2
TRAPPC3-205ENST00000462715 CALCOCO1Q9P1Z2 691 aa13.8□□□□□ -0.2
TRAPPC3-205ENST00000462715 CGNQ9P2M7 1197 aaKnown RBP13.8□□□□□ -0.2
TRAPPC3-205ENST00000462715 TBC1D2BQ9UPU7 963 aa13.8□□□□□ -0.2
TRAPPC3-205ENST00000462715 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.8□□□□□ -0.2
TRAPPC3-205ENST00000462715 CHAF1AQ13111 956 aaPredicted RBP13.79□□□□□ -0.2
TRAPPC3-205ENST00000462715 ZNF652Q9Y2D9 606 aa13.79□□□□□ -0.2
TRAPPC3-205ENST00000462715 RGL2O15211 777 aa13.79□□□□□ -0.2
TRAPPC3-205ENST00000462715 ZBTB7AO95365 584 aa13.79□□□□□ -0.2
TRAPPC3-205ENST00000462715 IRX5P78411 483 aaPredicted RBP13.79□□□□□ -0.2
TRAPPC3-205ENST00000462715 USPL1Q5W0Q7 1092 aa13.79□□□□□ -0.2
TRAPPC3-205ENST00000462715 LRP10Q7Z4F1 713 aa13.79□□□□□ -0.2
TRAPPC3-205ENST00000462715 NLGN1Q8N2Q7 840 aa13.79□□□□□ -0.2
TRAPPC3-205ENST00000462715 SRP68Q9UHB9 627 aaKnown RBP13.79□□□□□ -0.2
TRAPPC3-205ENST00000462715 SCN7AQ01118 1682 aa13.78□□□□□ -0.2
TRAPPC3-205ENST00000462715 TULP2O00295 520 aa13.78□□□□□ -0.2
TRAPPC3-205ENST00000462715 GYS1P13807 737 aa13.78□□□□□ -0.2
TRAPPC3-205ENST00000462715 BMP2KLQ5H9B9 411 aa13.78□□□□□ -0.2
TRAPPC3-205ENST00000462715 XAGE3Q8WTP9 111 aa13.78□□□□□ -0.2
TRAPPC3-205ENST00000462715 SLC4A2P04920 1241 aa13.78□□□□□ -0.2
TRAPPC3-205ENST00000462715 PTMAP06454 111 aaKnown RBP13.78□□□□□ -0.2
TRAPPC3-205ENST00000462715 AIMP1Q12904 312 aaKnown RBP13.78□□□□□ -0.2
TRAPPC3-205ENST00000462715 COPS6Q7L5N1 327 aa13.78□□□□□ -0.2
TRAPPC3-205ENST00000462715 MAP3K15Q6ZN16 1313 aa13.77□□□□□ -0.2
TRAPPC3-205ENST00000462715 CACNA1FO60840 1977 aa13.77□□□□□ -0.21
TRAPPC3-205ENST00000462715 ERVV-1B6SEH8 477 aa13.77□□□□□ -0.21
TRAPPC3-205ENST00000462715 CAMTA2O94983 1202 aa13.77□□□□□ -0.21
TRAPPC3-205ENST00000462715 IRX3P78415 501 aaPredicted RBP13.77□□□□□ -0.21
TRAPPC3-205ENST00000462715 SYAP1Q96A49 352 aaPredicted RBP13.77□□□□□ -0.21
TRAPPC3-205ENST00000462715 ARID3AQ99856 593 aa13.77□□□□□ -0.21
TRAPPC3-205ENST00000462715 YY1AP1Q9H869 796 aa13.77□□□□□ -0.21
TRAPPC3-205ENST00000462715 SPON1Q9HCB6 807 aa13.77□□□□□ -0.21
TRAPPC3-205ENST00000462715 BCORQ6W2J9 1755 aa13.77□□□□□ -0.21
TRAPPC3-205ENST00000462715 DDX58O95786 925 aaKnown RBP13.76□□□□□ -0.21
TRAPPC3-205ENST00000462715 ALDH1L2Q3SY69 923 aa13.76□□□□□ -0.21
TRAPPC3-205ENST00000462715 CLEC4GQ6UXB4 293 aa13.76□□□□□ -0.21
TRAPPC3-205ENST00000462715 TTLL7Q6ZT98 887 aa13.76□□□□□ -0.21
TRAPPC3-205ENST00000462715 POLD1P28340 1107 aa13.76□□□□□ -0.21
TRAPPC3-205ENST00000462715 MSL1Q68DK7 614 aa13.76□□□□□ -0.21
TRAPPC3-205ENST00000462715 MCTP1Q6DN14 999 aa13.76□□□□□ -0.21
TRAPPC3-205ENST00000462715 RABEP1Q15276 862 aa13.75□□□□□ -0.21
TRAPPC3-205ENST00000462715 ZBTB3Q9H5J0 574 aa13.75□□□□□ -0.21
TRAPPC3-205ENST00000462715 ATF5Q9Y2D1 282 aaPredicted RBP13.75□□□□□ -0.21
TRAPPC3-205ENST00000462715 PHAXQ9H814 394 aaKnown RBP13.75□□□□□ -0.21
TRAPPC3-205ENST00000462715 MORC2Q9Y6X9 1032 aaPredicted RBP13.75□□□□□ -0.21
TRAPPC3-205ENST00000462715 SLFN14P0C7P3 912 aa13.74□□□□□ -0.21
TRAPPC3-205ENST00000462715 ANKRD13DQ6ZTN6 518 aa13.74□□□□□ -0.21
TRAPPC3-205ENST00000462715 PLBD2Q8NHP8 589 aa13.74□□□□□ -0.21
TRAPPC3-205ENST00000462715 SSH1Q8WYL5 1049 aa13.74□□□□□ -0.21
TRAPPC3-205ENST00000462715 TSPY26PQ9H489 355 aa13.74□□□□□ -0.21
TRAPPC3-205ENST00000462715 SMC4Q9NTJ3 1288 aa13.74□□□□□ -0.21
TRAPPC3-205ENST00000462715 FLIIQ13045 1269 aa13.74□□□□□ -0.21
TRAPPC3-205ENST00000462715 HSP90AB3PQ58FF7 597 aa13.74□□□□□ -0.21
TRAPPC3-205ENST00000462715 DDX19BQ9UMR2 479 aa13.74□□□□□ -0.21
TRAPPC3-205ENST00000462715 COL24A1Q17RW2 1714 aa13.73□□□□□ -0.21
TRAPPC3-205ENST00000462715 NUCB1Q02818 461 aa13.73□□□□□ -0.21
TRAPPC3-205ENST00000462715 ZKSCAN2Q63HK3 967 aa13.73□□□□□ -0.21
TRAPPC3-205ENST00000462715 GIGYF2Q6Y7W6 1299 aaKnown RBP13.73□□□□□ -0.21
TRAPPC3-205ENST00000462715 RIC3Q7Z5B4 369 aa13.73□□□□□ -0.21
TRAPPC3-205ENST00000462715 MMP10P09238 476 aa13.73□□□□□ -0.21
TRAPPC3-205ENST00000462715 EFCC1Q9HA90 598 aa13.73□□□□□ -0.21
TRAPPC3-205ENST00000462715 DDX41Q9UJV9 622 aaKnown RBP13.73□□□□□ -0.21
TRAPPC3-205ENST00000462715 RLBP1P12271 317 aa13.72□□□□□ -0.21
TRAPPC3-205ENST00000462715 KCNJ4P48050 445 aa13.72□□□□□ -0.21
TRAPPC3-205ENST00000462715 HLFQ16534 295 aa13.72□□□□□ -0.21
TRAPPC3-205ENST00000462715 G2E3Q7L622 706 aa13.72□□□□□ -0.21
TRAPPC3-205ENST00000462715 MRPL50Q8N5N7 158 aaKnown RBP13.72□□□□□ -0.21
TRAPPC3-205ENST00000462715 GPT2Q8TD30 523 aa13.72□□□□□ -0.21
TRAPPC3-205ENST00000462715 SETDB2Q96T68 719 aa13.72□□□□□ -0.21
TRAPPC3-205ENST00000462715 PARP3Q9Y6F1 533 aa13.72□□□□□ -0.21
TRAPPC3-205ENST00000462715 ATP10DQ9P241 1426 aa13.72□□□□□ -0.21
TRAPPC3-205ENST00000462715 BCL2L13Q9BXK5 485 aa13.72□□□□□ -0.21
TRAPPC3-205ENST00000462715 CARMIL3Q8ND23 1372 aa13.71□□□□□ -0.21
TRAPPC3-205ENST00000462715 PTGER2P43116 358 aa13.71□□□□□ -0.21
TRAPPC3-205ENST00000462715 NFIXQ14938 502 aa13.71□□□□□ -0.21
TRAPPC3-205ENST00000462715 TBC1D9BQ66K14 1250 aa13.71□□□□□ -0.21
TRAPPC3-205ENST00000462715 KSR2Q6VAB6 950 aa13.71□□□□□ -0.21
TRAPPC3-205ENST00000462715 BICDL1Q6ZP65 573 aa13.71□□□□□ -0.21
TRAPPC3-205ENST00000462715 PAXIP1Q6ZW49 1069 aaPredicted RBP13.71□□□□□ -0.21
TRAPPC3-205ENST00000462715 DZIP1LQ8IYY4 767 aaKnown RBP13.71□□□□□ -0.21
TRAPPC3-205ENST00000462715 CTNNA3Q9UI47 895 aa13.71□□□□□ -0.21
TRAPPC3-205ENST00000462715 NIP7Q9Y221 180 aaKnown RBP eCLIP13.71□□□□□ -0.21
TRAPPC3-205ENST00000462715 PTPRCP08575 1304 aa13.71□□□□□ -0.21
TRAPPC3-205ENST00000462715 NUP98P52948 1817 aa13.71□□□□□ -0.21
TRAPPC3-205ENST00000462715 VGLL3A8MV65 326 aa13.71□□□□□ -0.22
TRAPPC3-205ENST00000462715 TM4SF1P30408 202 aa13.71□□□□□ -0.22
TRAPPC3-205ENST00000462715 TERF2Q15554 542 aa13.71□□□□□ -0.22
TRAPPC3-205ENST00000462715 SGIP1Q9BQI5 828 aa13.71□□□□□ -0.22
TRAPPC3-205ENST00000462715 ARFGEF2Q9Y6D5 1785 aa13.71□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms