RNA–Protein interactions for RNA: ENST00000460627.5

CHRD-208, Transcript of chordin, humanhuman

TSL 2

Gene CHRD, Length 4,719 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-208ENST00000460627 PARP3Q9Y6F1 533 aa20.59■□□□□ 0.89
CHRD-208ENST00000460627 EYA2O00167 538 aa20.59■□□□□ 0.89
CHRD-208ENST00000460627 CCT2P78371 535 aaKnown RBP20.59■□□□□ 0.89
CHRD-208ENST00000460627 ZHX3Q9H4I2 956 aa20.59■□□□□ 0.89
CHRD-208ENST00000460627 SERPINC1P01008 464 aa20.59■□□□□ 0.89
CHRD-208ENST00000460627 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.59■□□□□ 0.89
CHRD-208ENST00000460627 CCDC87Q9NVE4 849 aa20.59■□□□□ 0.89
CHRD-208ENST00000460627 CCDC173Q0VFZ6 552 aa20.59■□□□□ 0.89
CHRD-208ENST00000460627 PLEKHM2Q8IWE5 1019 aa20.59■□□□□ 0.89
CHRD-208ENST00000460627 IL17REQ8NFR9 667 aa20.59■□□□□ 0.89
CHRD-208ENST00000460627 FAM89AQ96GI7 184 aa20.59■□□□□ 0.89
CHRD-208ENST00000460627 TFCP2Q12800 502 aa20.58■□□□□ 0.89
CHRD-208ENST00000460627 MAP3K11Q16584 847 aa20.58■□□□□ 0.89
CHRD-208ENST00000460627 CCDC178Q5BJE1 867 aa20.58■□□□□ 0.89
CHRD-208ENST00000460627 NBPF14Q5TI25 921 aa20.58■□□□□ 0.89
CHRD-208ENST00000460627 CABP5Q9NP86 173 aa20.58■□□□□ 0.89
CHRD-208ENST00000460627 USP21Q9UK80 565 aa20.58■□□□□ 0.89
CHRD-208ENST00000460627 CCDC12Q8WUD4 166 aaPredicted RBP20.58■□□□□ 0.89
CHRD-208ENST00000460627 IQSEC3Q9UPP2 1182 aaPredicted RBP20.58■□□□□ 0.89
CHRD-208ENST00000460627 PRR36Q9H6K5 1346 aa20.58■□□□□ 0.89
CHRD-208ENST00000460627 SSBP05455 408 aaKnown RBP eCLIP20.58■□□□□ 0.88
CHRD-208ENST00000460627 FAM43AQ8N2R8 423 aa20.58■□□□□ 0.88
CHRD-208ENST00000460627 ORC3Q9UBD5 711 aaPredicted RBP20.58■□□□□ 0.88
CHRD-208ENST00000460627 TMEM132AQ24JP5 1023 aa20.58■□□□□ 0.88
CHRD-208ENST00000460627 ESR2Q92731 530 aa20.58■□□□□ 0.88
CHRD-208ENST00000460627 RAD50Q92878 1312 aa20.57■□□□□ 0.88
CHRD-208ENST00000460627 NAP1L1P55209 391 aaKnown RBP20.57■□□□□ 0.88
CHRD-208ENST00000460627 KAT14Q9H8E8 782 aa20.57■□□□□ 0.88
CHRD-208ENST00000460627 NSFL1CQ9UNZ2 370 aaKnown RBP20.57■□□□□ 0.88
CHRD-208ENST00000460627 A2ML1A8K2U0 1454 aa20.57■□□□□ 0.88
CHRD-208ENST00000460627 GNAT2P19087 354 aa20.57■□□□□ 0.88
CHRD-208ENST00000460627 METAP2P50579 478 aaKnown RBP eCLIP20.57■□□□□ 0.88
CHRD-208ENST00000460627 CT47A1Q5JQC4 288 aaPredicted RBP20.57■□□□□ 0.88
CHRD-208ENST00000460627 CCDC194A0A1B0GVG4 234 aa20.56■□□□□ 0.88
CHRD-208ENST00000460627 MICU3Q86XE3 530 aa20.56■□□□□ 0.88
CHRD-208ENST00000460627 RAB34Q9BZG1 259 aa20.56■□□□□ 0.88
CHRD-208ENST00000460627 SLC4A4Q9Y6R1 1079 aa20.56■□□□□ 0.88
CHRD-208ENST00000460627 PPP4R3BQ5MIZ7 849 aa20.56■□□□□ 0.88
CHRD-208ENST00000460627 ABCA9Q8IUA7 1624 aa20.56■□□□□ 0.88
CHRD-208ENST00000460627 ERBB4Q15303 1308 aa20.56■□□□□ 0.88
CHRD-208ENST00000460627 MYO1BO43795 1136 aa20.56■□□□□ 0.88
CHRD-208ENST00000460627 PDE8AO60658 829 aa20.56■□□□□ 0.88
CHRD-208ENST00000460627 BRF1Q92994 677 aa20.56■□□□□ 0.88
CHRD-208ENST00000460627 IGSF1Q8N6C5 1336 aa20.56■□□□□ 0.88
CHRD-208ENST00000460627 STX6O43752 255 aa20.56■□□□□ 0.88
CHRD-208ENST00000460627 GIGYF1O75420 1035 aaPredicted RBP20.56■□□□□ 0.88
CHRD-208ENST00000460627 NLRP5P59047 1200 aa20.56■□□□□ 0.88
CHRD-208ENST00000460627 RNF113AO15541 343 aaKnown RBP20.55■□□□□ 0.88
CHRD-208ENST00000460627 CNBD1Q8NA66 436 aa20.55■□□□□ 0.88
CHRD-208ENST00000460627 HELBQ8NG08 1087 aaPredicted RBP20.55■□□□□ 0.88
CHRD-208ENST00000460627 BRPF1P55201 1214 aaPredicted RBP20.55■□□□□ 0.88
CHRD-208ENST00000460627 GUCY1B3Q02153 619 aa20.55■□□□□ 0.88
CHRD-208ENST00000460627 CCP110O43303 1012 aa20.55■□□□□ 0.88
CHRD-208ENST00000460627 GJB2P29033 226 aa20.55■□□□□ 0.88
CHRD-208ENST00000460627 WTAPQ15007 396 aa20.55■□□□□ 0.88
CHRD-208ENST00000460627 CBFA2T2O43439 604 aa20.55■□□□□ 0.88
CHRD-208ENST00000460627 NMIQ13287 307 aaPredicted RBP20.55■□□□□ 0.88
CHRD-208ENST00000460627 GCKRQ14397 625 aa20.55■□□□□ 0.88
CHRD-208ENST00000460627 ZNHIT6Q9NWK9 470 aaKnown RBP20.55■□□□□ 0.88
CHRD-208ENST00000460627 HDAC9Q9UKV0 1011 aa20.55■□□□□ 0.88
CHRD-208ENST00000460627 TNIP1Q15025 636 aa20.54■□□□□ 0.88
CHRD-208ENST00000460627 PLCG2P16885 1265 aa20.54■□□□□ 0.88
CHRD-208ENST00000460627 WWC2Q6AWC2 1192 aa20.54■□□□□ 0.88
CHRD-208ENST00000460627 EYA3Q99504 573 aa20.54■□□□□ 0.88
CHRD-208ENST00000460627 GPS2Q13227 327 aa20.54■□□□□ 0.88
CHRD-208ENST00000460627 OGFOD1Q8N543 542 aa20.54■□□□□ 0.88
CHRD-208ENST00000460627 CARD10Q9BWT7 1032 aa20.54■□□□□ 0.88
CHRD-208ENST00000460627 UNC13BO14795 1591 aa20.54■□□□□ 0.88
CHRD-208ENST00000460627 SMTNL1A8MU46 457 aa20.53■□□□□ 0.88
CHRD-208ENST00000460627 MAP3K4Q9Y6R4 1608 aa20.53■□□□□ 0.88
CHRD-208ENST00000460627 SSFA2P28290 1259 aa20.53■□□□□ 0.88
CHRD-208ENST00000460627 CUL5Q93034 780 aa20.53■□□□□ 0.88
CHRD-208ENST00000460627 TMX3Q96JJ7 454 aa20.53■□□□□ 0.88
CHRD-208ENST00000460627 WDHD1O75717 1129 aaPredicted RBP20.53■□□□□ 0.88
CHRD-208ENST00000460627 LARP6Q9BRS8 491 aaKnown RBP20.53■□□□□ 0.88
CHRD-208ENST00000460627 GRPEL1Q9HAV7 217 aa20.53■□□□□ 0.88
CHRD-208ENST00000460627 KLF18A0A0U1RQI7 1052 aa20.53■□□□□ 0.88
CHRD-208ENST00000460627 FEZ1Q99689 392 aa20.53■□□□□ 0.88
CHRD-208ENST00000460627 ANKARQ7Z5J8 1434 aa20.52■□□□□ 0.88
CHRD-208ENST00000460627 MNS1Q8NEH6 495 aa20.52■□□□□ 0.88
CHRD-208ENST00000460627 POLD1P28340 1107 aa20.52■□□□□ 0.88
CHRD-208ENST00000460627 PPFIBP1Q86W92 1011 aa20.52■□□□□ 0.88
CHRD-208ENST00000460627 STX8Q9UNK0 236 aa20.52■□□□□ 0.88
CHRD-208ENST00000460627 ZBTB43O43298 467 aa20.52■□□□□ 0.88
CHRD-208ENST00000460627 ITGA6P23229 1130 aa20.52■□□□□ 0.88
CHRD-208ENST00000460627 TNPO1Q92973 898 aaKnown RBP20.51■□□□□ 0.87
CHRD-208ENST00000460627 PLEKHF1Q96S99 279 aa20.51■□□□□ 0.87
CHRD-208ENST00000460627 MAGEB6P1A0A0J9YX57 407 aa20.51■□□□□ 0.87
CHRD-208ENST00000460627 CHMLP26374 656 aa20.51■□□□□ 0.87
CHRD-208ENST00000460627 GNAQP50148 359 aa20.51■□□□□ 0.87
CHRD-208ENST00000460627 CTAGE5O15320 804 aa20.51■□□□□ 0.87
CHRD-208ENST00000460627 AOX1Q06278 1338 aa20.51■□□□□ 0.87
CHRD-208ENST00000460627 TMEM266Q2M3C6 531 aa20.51■□□□□ 0.87
CHRD-208ENST00000460627 ARID3AQ99856 593 aa20.51■□□□□ 0.87
CHRD-208ENST00000460627 A0A1B0GUL7 405 aa20.5■□□□□ 0.87
CHRD-208ENST00000460627 C8orf34Q49A92 452 aa20.5■□□□□ 0.87
CHRD-208ENST00000460627 CCDC183Q5T5S1 534 aa20.5■□□□□ 0.87
CHRD-208ENST00000460627 ZSCAN16Q9H4T2 348 aaPredicted RBP20.5■□□□□ 0.87
CHRD-208ENST00000460627 EHMT1Q9H9B1 1298 aa20.5■□□□□ 0.87
CHRD-208ENST00000460627 ODF2Q5BJF6 829 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms