RNA–Protein interactions for RNA: ENST00000456581.1

LINC00959-201, Transcript of HCG1648656, isoform CRA_a, humanhuman

TSL 2

Gene LINC00959, Length 2,843 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959-201ENST00000456581 LMBR1LQ6UX01 489 aa14.88□□□□□ -0.03
LINC00959-201ENST00000456581 BOLA2Q9H3K6 86 aa14.88□□□□□ -0.03
LINC00959-201ENST00000456581 TOGARAM1Q9Y4F4 1720 aa14.88□□□□□ -0.03
LINC00959-201ENST00000456581 ARFGEF2Q9Y6D5 1785 aa14.88□□□□□ -0.03
LINC00959-201ENST00000456581 RFX5P48382 616 aaPredicted RBP14.88□□□□□ -0.03
LINC00959-201ENST00000456581 CASP7P55210 303 aa14.88□□□□□ -0.03
LINC00959-201ENST00000456581 CNTROBQ8N137 903 aa14.88□□□□□ -0.03
LINC00959-201ENST00000456581 GLRX3O76003 335 aaKnown RBP14.88□□□□□ -0.03
LINC00959-201ENST00000456581 PTH1RQ03431 593 aa14.88□□□□□ -0.03
LINC00959-201ENST00000456581 CASTP20810 708 aaKnown RBP14.87□□□□□ -0.03
LINC00959-201ENST00000456581 MCM2P49736 904 aa14.87□□□□□ -0.03
LINC00959-201ENST00000456581 TFCP2Q12800 502 aa14.87□□□□□ -0.03
LINC00959-201ENST00000456581 BCL11BQ9C0K0 894 aaPredicted RBP14.87□□□□□ -0.03
LINC00959-201ENST00000456581 ATG3Q9NT62 314 aa14.87□□□□□ -0.03
LINC00959-201ENST00000456581 ROBO1Q9Y6N7 1651 aa14.87□□□□□ -0.03
LINC00959-201ENST00000456581 SGSM2O43147 1006 aa14.87□□□□□ -0.03
LINC00959-201ENST00000456581 CHGBP05060 677 aa14.87□□□□□ -0.03
LINC00959-201ENST00000456581 SYT1P21579 422 aa14.87□□□□□ -0.03
LINC00959-201ENST00000456581 ERC1Q8IUD2 1116 aa14.87□□□□□ -0.03
LINC00959-201ENST00000456581 CCDC83Q8IWF9 413 aa14.87□□□□□ -0.03
LINC00959-201ENST00000456581 TCEANC2Q96MN5 208 aa14.87□□□□□ -0.03
LINC00959-201ENST00000456581 CCDC85AQ96PX6 553 aaPredicted RBP14.87□□□□□ -0.03
LINC00959-201ENST00000456581 LSG1Q9H089 658 aaKnown RBP14.87□□□□□ -0.03
LINC00959-201ENST00000456581 HDAC5Q9UQL6 1122 aa14.87□□□□□ -0.03
LINC00959-201ENST00000456581 NUTM2BA6NNL0 878 aaPredicted RBP14.86□□□□□ -0.03
LINC00959-201ENST00000456581 NUTM2EB1AL46 878 aaPredicted RBP14.86□□□□□ -0.03
LINC00959-201ENST00000456581 ANAPC15P60006 121 aa14.86□□□□□ -0.03
LINC00959-201ENST00000456581 GIMAP6Q6P9H5 292 aa14.86□□□□□ -0.03
LINC00959-201ENST00000456581 NUTM2AQ8IVF1 878 aaPredicted RBP14.86□□□□□ -0.03
LINC00959-201ENST00000456581 NECAB1Q8N987 351 aa14.86□□□□□ -0.03
LINC00959-201ENST00000456581 INTS4Q96HW7 963 aaKnown RBP14.86□□□□□ -0.03
LINC00959-201ENST00000456581 SLC4A9Q96Q91 983 aa14.86□□□□□ -0.03
LINC00959-201ENST00000456581 FAM173BQ6P4H8 233 aa14.86□□□□□ -0.03
LINC00959-201ENST00000456581 ZNF594Q96JF6 807 aaPredicted RBP14.86□□□□□ -0.03
LINC00959-201ENST00000456581 TTC41PQ6P2S7 1318 aa14.86□□□□□ -0.03
LINC00959-201ENST00000456581 USP42Q9H9J4 1324 aaKnown RBP14.86□□□□□ -0.03
LINC00959-201ENST00000456581 PIP4K2BP78356 416 aa14.85□□□□□ -0.03
LINC00959-201ENST00000456581 HS1BP3Q53T59 392 aa14.85□□□□□ -0.03
LINC00959-201ENST00000456581 SYNE4Q8N205 404 aa14.85□□□□□ -0.03
LINC00959-201ENST00000456581 FAM227BQ96M60 508 aa14.85□□□□□ -0.03
LINC00959-201ENST00000456581 CCDC39Q9UFE4 941 aa14.85□□□□□ -0.03
LINC00959-201ENST00000456581 RAD50Q92878 1312 aa14.85□□□□□ -0.03
LINC00959-201ENST00000456581 PLEKHG2Q9H7P9 1386 aa14.85□□□□□ -0.03
LINC00959-201ENST00000456581 FOXO4P98177 505 aa14.85□□□□□ -0.03
LINC00959-201ENST00000456581 PRPF40BQ6NWY9 871 aaKnown RBP14.85□□□□□ -0.03
LINC00959-201ENST00000456581 WDR33Q9C0J8 1336 aaKnown RBP14.85□□□□□ -0.03
LINC00959-201ENST00000456581 UBR2Q8IWV8 1755 aa14.85□□□□□ -0.03
LINC00959-201ENST00000456581 DNM1Q05193 864 aaKnown RBP14.84□□□□□ -0.03
LINC00959-201ENST00000456581 TTC14Q96N46 770 aa14.84□□□□□ -0.03
LINC00959-201ENST00000456581 DBNLQ9UJU6 430 aaKnown RBP14.84□□□□□ -0.03
LINC00959-201ENST00000456581 COL22A1Q8NFW1 1626 aaPredicted RBP14.84□□□□□ -0.03
LINC00959-201ENST00000456581 RABL6Q3YEC7 729 aaPredicted RBP14.84□□□□□ -0.03
LINC00959-201ENST00000456581 DIAPH3Q9NSV4 1193 aa14.84□□□□□ -0.03
LINC00959-201ENST00000456581 CWC25Q9NXE8 425 aaPredicted RBP14.84□□□□□ -0.03
LINC00959-201ENST00000456581 LAMB4A4D0S4 1761 aa14.84□□□□□ -0.03
LINC00959-201ENST00000456581 H7C1W4 665 aa14.84□□□□□ -0.03
LINC00959-201ENST00000456581 FERMT3Q86UX7 667 aa14.84□□□□□ -0.03
LINC00959-201ENST00000456581 COPRSQ9NQ92 184 aa14.84□□□□□ -0.03
LINC00959-201ENST00000456581 TNS2Q63HR2 1409 aa14.83□□□□□ -0.04
LINC00959-201ENST00000456581 STX6O43752 255 aa14.83□□□□□ -0.04
LINC00959-201ENST00000456581 ZSCAN22P10073 491 aaPredicted RBP14.83□□□□□ -0.04
LINC00959-201ENST00000456581 DNTTIP2Q5QJE6 756 aaKnown RBP14.83□□□□□ -0.04
LINC00959-201ENST00000456581 TAF6LQ9Y6J9 622 aa14.83□□□□□ -0.04
LINC00959-201ENST00000456581 COL16A1Q07092 1604 aaPredicted RBP14.83□□□□□ -0.04
LINC00959-201ENST00000456581 ADCY5O95622 1261 aa14.83□□□□□ -0.04
LINC00959-201ENST00000456581 ST3GAL1Q11201 340 aa14.83□□□□□ -0.04
LINC00959-201ENST00000456581 JAKMIP1Q96N16 626 aaKnown RBP14.83□□□□□ -0.04
LINC00959-201ENST00000456581 DBNDD2Q9BQY9 259 aa14.83□□□□□ -0.04
LINC00959-201ENST00000456581 VPS37CA5D8V6 355 aaPredicted RBP14.82□□□□□ -0.04
LINC00959-201ENST00000456581 GPTP24298 496 aa14.82□□□□□ -0.04
LINC00959-201ENST00000456581 FAM89AQ96GI7 184 aa14.82□□□□□ -0.04
LINC00959-201ENST00000456581 ACSBG1Q96GR2 724 aa14.82□□□□□ -0.04
LINC00959-201ENST00000456581 GPATCH3Q96I76 525 aa14.82□□□□□ -0.04
LINC00959-201ENST00000456581 EXOC5O00471 708 aa14.82□□□□□ -0.04
LINC00959-201ENST00000456581 GJB2P29033 226 aa14.82□□□□□ -0.04
LINC00959-201ENST00000456581 HLFQ16534 295 aa14.82□□□□□ -0.04
LINC00959-201ENST00000456581 LRRC24Q50LG9 513 aa14.82□□□□□ -0.04
LINC00959-201ENST00000456581 TNNI3KQ59H18 835 aa14.82□□□□□ -0.04
LINC00959-201ENST00000456581 SMC3Q9UQE7 1217 aa14.82□□□□□ -0.04
LINC00959-201ENST00000456581 FPGT-TNNI3KV9GXZ4 949 aa14.82□□□□□ -0.04
LINC00959-201ENST00000456581 NMIQ13287 307 aaPredicted RBP14.81□□□□□ -0.04
LINC00959-201ENST00000456581 ZNF710Q8N1W2 664 aa14.81□□□□□ -0.04
LINC00959-201ENST00000456581 SPC24Q8NBT2 197 aa14.81□□□□□ -0.04
LINC00959-201ENST00000456581 PUS3Q9BZE2 481 aaKnown RBP14.81□□□□□ -0.04
LINC00959-201ENST00000456581 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.81□□□□□ -0.04
LINC00959-201ENST00000456581 A0A0D9SFI3 127 aa14.81□□□□□ -0.04
LINC00959-201ENST00000456581 TIMM10P62072 90 aa14.81□□□□□ -0.04
LINC00959-201ENST00000456581 SLFNL1Q499Z3 407 aa14.81□□□□□ -0.04
LINC00959-201ENST00000456581 LIMCH1Q9UPQ0 1083 aa14.81□□□□□ -0.04
LINC00959-201ENST00000456581 ITGB4P16144 1822 aa14.81□□□□□ -0.04
LINC00959-201ENST00000456581 F13A1P00488 732 aa14.8□□□□□ -0.04
LINC00959-201ENST00000456581 ILDR1Q86SU0 546 aaPredicted RBP14.8□□□□□ -0.04
LINC00959-201ENST00000456581 SYAP1Q96A49 352 aaPredicted RBP14.8□□□□□ -0.04
LINC00959-201ENST00000456581 FSD1Q9BTV5 496 aa14.8□□□□□ -0.04
LINC00959-201ENST00000456581 PAPPAQ13219 1627 aa14.8□□□□□ -0.04
LINC00959-201ENST00000456581 ATG9AQ7Z3C6 839 aa14.8□□□□□ -0.04
LINC00959-201ENST00000456581 EVI5LQ96CN4 794 aa14.8□□□□□ -0.04
LINC00959-201ENST00000456581 ZBTB1Q9Y2K1 713 aa14.8□□□□□ -0.04
LINC00959-201ENST00000456581 DISP2A7MBM2 1401 aa14.8□□□□□ -0.04
LINC00959-201ENST00000456581 KIAA2012Q0VF49 1180 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms