RNA–Protein interactions for RNA: ENST00000453553.1

USP25-206, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 3

Gene USP25, Length 611 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-206ENST00000453553 ADAMTS2O95450 1211 aa8.31□□□□□ -1.08
USP25-206ENST00000453553 MAPK1P28482 360 aa8.31□□□□□ -1.08
USP25-206ENST00000453553 TRIP4Q15650 581 aaPredicted RBP8.31□□□□□ -1.08
USP25-206ENST00000453553 C8orf34Q49A92 452 aa8.31□□□□□ -1.08
USP25-206ENST00000453553 XKR5Q6UX68 686 aa8.31□□□□□ -1.08
USP25-206ENST00000453553 GJD3Q8N144 294 aa8.31□□□□□ -1.08
USP25-206ENST00000453553 PRR12Q9ULL5 1215 aa8.31□□□□□ -1.08
USP25-206ENST00000453553 SASH3O75995 380 aa8.3□□□□□ -1.08
USP25-206ENST00000453553 TARSP26639 723 aaKnown RBP8.3□□□□□ -1.08
USP25-206ENST00000453553 MAP2K3P46734 347 aa8.3□□□□□ -1.08
USP25-206ENST00000453553 EHHADHQ08426 723 aa8.3□□□□□ -1.08
USP25-206ENST00000453553 SCARF2Q96GP6 870 aaPredicted RBP8.3□□□□□ -1.08
USP25-206ENST00000453553 ITGB2P05107 769 aa8.29□□□□□ -1.08
USP25-206ENST00000453553 SRSF11Q05519 484 aaKnown RBP8.29□□□□□ -1.08
USP25-206ENST00000453553 PDE3BQ13370 1112 aa8.29□□□□□ -1.08
USP25-206ENST00000453553 NEUROD1Q13562 356 aa8.29□□□□□ -1.08
USP25-206ENST00000453553 PDE12Q6L8Q7 609 aaKnown RBP8.29□□□□□ -1.08
USP25-206ENST00000453553 NLRP13Q86W25 1043 aa8.29□□□□□ -1.08
USP25-206ENST00000453553 TMC1Q8TDI8 760 aa8.29□□□□□ -1.08
USP25-206ENST00000453553 BHMTQ93088 406 aa8.29□□□□□ -1.08
USP25-206ENST00000453553 PNMA5Q96PV4 448 aa8.29□□□□□ -1.08
USP25-206ENST00000453553 FAM129BQ96TA1 746 aa8.29□□□□□ -1.08
USP25-206ENST00000453553 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.29□□□□□ -1.08
USP25-206ENST00000453553 IGF1RP08069 1367 aa8.29□□□□□ -1.08
USP25-206ENST00000453553 A6NHS1 94 aa8.28□□□□□ -1.08
USP25-206ENST00000453553 CELA2BP08218 269 aaPredicted RBP8.28□□□□□ -1.08
USP25-206ENST00000453553 KRT25Q7Z3Z0 450 aa8.28□□□□□ -1.08
USP25-206ENST00000453553 ZSCAN29Q8IWY8 852 aaPredicted RBP8.28□□□□□ -1.08
USP25-206ENST00000453553 ELP3Q9H9T3 547 aa8.28□□□□□ -1.08
USP25-206ENST00000453553 AVENQ9NQS1 362 aaPredicted RBP8.28□□□□□ -1.08
USP25-206ENST00000453553 ZNF468Q5VIY5 522 aaPredicted RBP8.27□□□□□ -1.09
USP25-206ENST00000453553 TMC7Q7Z402 723 aa8.27□□□□□ -1.09
USP25-206ENST00000453553 ZNF438Q7Z4V0 828 aa8.27□□□□□ -1.09
USP25-206ENST00000453553 RAB44Q7Z6P3 723 aaPredicted RBP8.27□□□□□ -1.09
USP25-206ENST00000453553 SYT9Q86SS6 491 aa8.27□□□□□ -1.09
USP25-206ENST00000453553 DMRTB1Q96MA1 342 aa8.27□□□□□ -1.09
USP25-206ENST00000453553 ASB16Q96NS5 453 aa8.27□□□□□ -1.09
USP25-206ENST00000453553 ZFATQ9P243 1243 aa8.27□□□□□ -1.09
USP25-206ENST00000453553 IGHA2P01877 340 aa8.26□□□□□ -1.09
USP25-206ENST00000453553 RARAP10276 462 aa8.26□□□□□ -1.09
USP25-206ENST00000453553 ARAFP10398 606 aa8.26□□□□□ -1.09
USP25-206ENST00000453553 NFKB1P19838 968 aa8.26□□□□□ -1.09
USP25-206ENST00000453553 MFAP1P55081 439 aaKnown RBP8.26□□□□□ -1.09
USP25-206ENST00000453553 PLA2G4EQ3MJ16 856 aa8.26□□□□□ -1.09
USP25-206ENST00000453553 KLF15Q9UIH9 416 aa8.26□□□□□ -1.09
USP25-206ENST00000453553 ADAM23O75077 832 aa8.25□□□□□ -1.09
USP25-206ENST00000453553 SIN3BO75182 1162 aa8.25□□□□□ -1.09
USP25-206ENST00000453553 MAP3K6O95382 1288 aa8.25□□□□□ -1.09
USP25-206ENST00000453553 PCBP4P57723 403 aaKnown RBP8.25□□□□□ -1.09
USP25-206ENST00000453553 TTC39BQ5VTQ0 682 aaPredicted RBP8.25□□□□□ -1.09
USP25-206ENST00000453553 NIF3L1Q9GZT8 377 aa8.25□□□□□ -1.09
USP25-206ENST00000453553 PODXL2Q9NZ53 605 aa8.25□□□□□ -1.09
USP25-206ENST00000453553 TMEM63CQ9P1W3 806 aa8.25□□□□□ -1.09
USP25-206ENST00000453553 CNTNAP5Q8WYK1 1306 aa8.25□□□□□ -1.09
USP25-206ENST00000453553 MMP20O60882 483 aa8.24□□□□□ -1.09
USP25-206ENST00000453553 PLCB3Q01970 1234 aa8.24□□□□□ -1.09
USP25-206ENST00000453553 DNAJC14Q6Y2X3 702 aaPredicted RBP8.24□□□□□ -1.09
USP25-206ENST00000453553 ABI2Q9NYB9 513 aaPredicted RBP8.24□□□□□ -1.09
USP25-206ENST00000453553 TLR7Q9NYK1 1049 aaKnown RBP8.24□□□□□ -1.09
USP25-206ENST00000453553 GPR182O15218 404 aa8.23□□□□□ -1.09
USP25-206ENST00000453553 TNFRSF21O75509 655 aa8.23□□□□□ -1.09
USP25-206ENST00000453553 NEFLP07196 543 aa8.23□□□□□ -1.09
USP25-206ENST00000453553 ADH6P28332 368 aa8.23□□□□□ -1.09
USP25-206ENST00000453553 DSC3Q14574 896 aa8.23□□□□□ -1.09
USP25-206ENST00000453553 ALKBH8Q96BT7 664 aaKnown RBP8.23□□□□□ -1.09
USP25-206ENST00000453553 DCAF5Q96JK2 942 aa8.23□□□□□ -1.09
USP25-206ENST00000453553 SPOCK3Q9BQ16 436 aa8.23□□□□□ -1.09
USP25-206ENST00000453553 OXCT2Q9BYC2 517 aaPredicted RBP8.23□□□□□ -1.09
USP25-206ENST00000453553 CNTN3Q9P232 1028 aa8.23□□□□□ -1.09
USP25-206ENST00000453553 GGA1Q9UJY5 639 aa8.23□□□□□ -1.09
USP25-206ENST00000453553 GDF2Q9UK05 429 aaPredicted RBP8.23□□□□□ -1.09
USP25-206ENST00000453553 ANKRD33BA6NCL7 494 aa8.22□□□□□ -1.09
USP25-206ENST00000453553 NEURL1BA8MQ27 555 aa8.22□□□□□ -1.09
USP25-206ENST00000453553 MSTNO14793 375 aa8.22□□□□□ -1.09
USP25-206ENST00000453553 TREHO43280 583 aa8.22□□□□□ -1.09
USP25-206ENST00000453553 PSAPP07602 524 aa8.22□□□□□ -1.09
USP25-206ENST00000453553 ERCC3P19447 782 aa8.22□□□□□ -1.09
USP25-206ENST00000453553 MAP3K10Q02779 954 aa8.22□□□□□ -1.09
USP25-206ENST00000453553 DHX32Q7L7V1 743 aaKnown RBP8.22□□□□□ -1.09
USP25-206ENST00000453553 GOLGA6L1Q8N7Z2 621 aa8.22□□□□□ -1.09
USP25-206ENST00000453553 C1orf127Q8N9H9 656 aa8.22□□□□□ -1.09
USP25-206ENST00000453553 OR13H1Q8NG92 308 aa8.22□□□□□ -1.09
USP25-206ENST00000453553 ACDQ96AP0 544 aa8.22□□□□□ -1.09
USP25-206ENST00000453553 SNX29Q8TEQ0 813 aa8.21□□□□□ -1.1
USP25-206ENST00000453553 TNFRSF25Q93038 417 aa8.21□□□□□ -1.1
USP25-206ENST00000453553 PMEPA1Q969W9 287 aa8.21□□□□□ -1.1
USP25-206ENST00000453553 IGFLR1Q9H665 355 aa8.21□□□□□ -1.1
USP25-206ENST00000453553 ZFYVE28Q9HCC9 887 aa8.21□□□□□ -1.1
USP25-206ENST00000453553 FOXD3Q9UJU5 478 aaPredicted RBP8.21□□□□□ -1.1
USP25-206ENST00000453553 ADARB2-AS1A8MUL3 147 aa8.2□□□□□ -1.1
USP25-206ENST00000453553 ZBTB42B2RXF5 422 aa8.2□□□□□ -1.1
USP25-206ENST00000453553 PHACTR2O75167 634 aa8.2□□□□□ -1.1
USP25-206ENST00000453553 PROCP04070 461 aa8.2□□□□□ -1.1
USP25-206ENST00000453553 SOX18P35713 384 aa8.2□□□□□ -1.1
USP25-206ENST00000453553 PLAURQ03405 335 aa8.2□□□□□ -1.1
USP25-206ENST00000453553 PCSK7Q16549 785 aa8.2□□□□□ -1.1
USP25-206ENST00000453553 FCHSD1Q86WN1 690 aa8.2□□□□□ -1.1
USP25-206ENST00000453553 UBE2OQ9C0C9 1292 aaKnown RBP8.2□□□□□ -1.1
USP25-206ENST00000453553 CHRDQ9H2X0 955 aa8.2□□□□□ -1.1
USP25-206ENST00000453553 CCDC9Q9Y3X0 531 aaKnown RBP8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 200.3 ms