RNA–Protein interactions for RNA: ENST00000453163.6

PDCD2-204, Transcript of programmed cell death 2, humanhuman

TSL 1 (best) BASIC

Gene PDCD2, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD2-204ENST00000453163 COL16A1Q07092 1604 aaPredicted RBP24.29■■□□□ 1.48
PDCD2-204ENST00000453163 NCLP19338 710 aaKnown RBP24.29■■□□□ 1.48
PDCD2-204ENST00000453163 CYP46A1Q9Y6A2 500 aa24.29■■□□□ 1.48
PDCD2-204ENST00000453163 SLC27A2O14975 620 aa24.28■■□□□ 1.48
PDCD2-204ENST00000453163 CHGBP05060 677 aa24.28■■□□□ 1.48
PDCD2-204ENST00000453163 VPS53Q5VIR6 699 aa24.28■■□□□ 1.48
PDCD2-204ENST00000453163 RPAP1Q9BWH6 1393 aaPredicted RBP24.28■■□□□ 1.48
PDCD2-204ENST00000453163 LRRC24Q50LG9 513 aa24.28■■□□□ 1.48
PDCD2-204ENST00000453163 TCIRG1Q13488 830 aa24.28■■□□□ 1.48
PDCD2-204ENST00000453163 COL9A3Q14050 684 aaPredicted RBP24.28■■□□□ 1.48
PDCD2-204ENST00000453163 CAVIN1Q6NZI2 390 aaKnown RBP24.28■■□□□ 1.48
PDCD2-204ENST00000453163 VSIG10Q8N0Z9 540 aa24.28■■□□□ 1.48
PDCD2-204ENST00000453163 HAUS7Q99871 368 aa24.28■■□□□ 1.48
PDCD2-204ENST00000453163 JCADQ9P266 1359 aa24.27■■□□□ 1.48
PDCD2-204ENST00000453163 GPT2Q8TD30 523 aa24.27■■□□□ 1.48
PDCD2-204ENST00000453163 NEUROD6Q96NK8 337 aa24.27■■□□□ 1.48
PDCD2-204ENST00000453163 PLCH1Q4KWH8 1693 aa24.26■■□□□ 1.47
PDCD2-204ENST00000453163 IL15P40933 162 aaPredicted RBP24.26■■□□□ 1.47
PDCD2-204ENST00000453163 DDX46Q7L014 1031 aaKnown RBP24.26■■□□□ 1.47
PDCD2-204ENST00000453163 TAF6LQ9Y6J9 622 aa24.26■■□□□ 1.47
PDCD2-204ENST00000453163 TCHHQ07283 1943 aa24.26■■□□□ 1.47
PDCD2-204ENST00000453163 ZNF609O15014 1411 aa24.26■■□□□ 1.47
PDCD2-204ENST00000453163 TIMM10P62072 90 aa24.26■■□□□ 1.47
PDCD2-204ENST00000453163 TEX13AQ9BXU3 409 aaPredicted RBP24.26■■□□□ 1.47
PDCD2-204ENST00000453163 EYA2O00167 538 aa24.25■■□□□ 1.47
PDCD2-204ENST00000453163 KIF6Q6ZMV9 814 aa24.25■■□□□ 1.47
PDCD2-204ENST00000453163 TAF5LO75529 589 aa24.25■■□□□ 1.47
PDCD2-204ENST00000453163 BCL9O00512 1426 aa24.24■■□□□ 1.47
PDCD2-204ENST00000453163 RFX7Q2KHR2 1363 aa24.24■■□□□ 1.47
PDCD2-204ENST00000453163 WNK3Q9BYP7 1800 aa24.24■■□□□ 1.47
PDCD2-204ENST00000453163 STARD3NLO95772 234 aa24.24■■□□□ 1.47
PDCD2-204ENST00000453163 FOXD4L6Q3SYB3 417 aaPredicted RBP24.24■■□□□ 1.47
PDCD2-204ENST00000453163 FOXD4L3Q6VB84 417 aaPredicted RBP24.24■■□□□ 1.47
PDCD2-204ENST00000453163 PUS3Q9BZE2 481 aaKnown RBP24.24■■□□□ 1.47
PDCD2-204ENST00000453163 COL22A1Q8NFW1 1626 aaPredicted RBP24.24■■□□□ 1.47
PDCD2-204ENST00000453163 WDR33Q9C0J8 1336 aaKnown RBP24.24■■□□□ 1.47
PDCD2-204ENST00000453163 ZSCAN21Q9Y5A6 473 aaPredicted RBP24.24■■□□□ 1.47
PDCD2-204ENST00000453163 CCDC83Q8IWF9 413 aa24.23■■□□□ 1.47
PDCD2-204ENST00000453163 SLC4A9Q96Q91 983 aa24.23■■□□□ 1.47
PDCD2-204ENST00000453163 SEC62Q99442 399 aaKnown RBP24.23■■□□□ 1.47
PDCD2-204ENST00000453163 RNF20Q5VTR2 975 aa24.23■■□□□ 1.47
PDCD2-204ENST00000453163 CCDC129Q6ZRS4 1044 aa24.23■■□□□ 1.47
PDCD2-204ENST00000453163 FAM89AQ96GI7 184 aa24.23■■□□□ 1.47
PDCD2-204ENST00000453163 GPR108Q9NPR9 543 aa24.23■■□□□ 1.47
PDCD2-204ENST00000453163 AHDC1Q5TGY3 1603 aaPredicted RBP24.23■■□□□ 1.47
PDCD2-204ENST00000453163 DTNBO60941 627 aa24.22■■□□□ 1.47
PDCD2-204ENST00000453163 ZSCAN23Q3MJ62 389 aa24.22■■□□□ 1.47
PDCD2-204ENST00000453163 SYTL4Q96C24 671 aaPredicted RBP24.22■■□□□ 1.47
PDCD2-204ENST00000453163 CCDC85AQ96PX6 553 aaPredicted RBP24.22■■□□□ 1.47
PDCD2-204ENST00000453163 RBM27Q9P2N5 1060 aaKnown RBP24.22■■□□□ 1.47
PDCD2-204ENST00000453163 NSFL1CQ9UNZ2 370 aaKnown RBP24.22■■□□□ 1.47
PDCD2-204ENST00000453163 LRP6O75581 1613 aa24.21■■□□□ 1.47
PDCD2-204ENST00000453163 SMC3Q9UQE7 1217 aa24.21■■□□□ 1.47
PDCD2-204ENST00000453163 ST3GAL1Q11201 340 aa24.21■■□□□ 1.47
PDCD2-204ENST00000453163 TRIM28Q13263 835 aaKnown RBP24.21■■□□□ 1.47
PDCD2-204ENST00000453163 KBTBD3Q8NAB2 608 aa24.21■■□□□ 1.47
PDCD2-204ENST00000453163 CIAO1O76071 339 aa24.2■■□□□ 1.47
PDCD2-204ENST00000453163 PSMA5P28066 241 aa24.2■■□□□ 1.47
PDCD2-204ENST00000453163 ME3Q16798 604 aa24.2■■□□□ 1.47
PDCD2-204ENST00000453163 TCEANC2Q96MN5 208 aa24.2■■□□□ 1.47
PDCD2-204ENST00000453163 MAP3K15Q6ZN16 1313 aa24.2■■□□□ 1.47
PDCD2-204ENST00000453163 A0A1B0GUL7 405 aa24.2■■□□□ 1.46
PDCD2-204ENST00000453163 GOLIM4O00461 696 aa24.2■■□□□ 1.46
PDCD2-204ENST00000453163 HLFQ16534 295 aa24.2■■□□□ 1.46
PDCD2-204ENST00000453163 CCDC57Q2TAC2 916 aa24.2■■□□□ 1.46
PDCD2-204ENST00000453163 SH2B1Q9NRF2 756 aaPredicted RBP24.2■■□□□ 1.46
PDCD2-204ENST00000453163 EXOC5O00471 708 aa24.19■■□□□ 1.46
PDCD2-204ENST00000453163 PCCAP05165 728 aaPredicted RBP24.19■■□□□ 1.46
PDCD2-204ENST00000453163 SYT1P21579 422 aa24.19■■□□□ 1.46
PDCD2-204ENST00000453163 ZSCAN31Q96LW9 406 aaPredicted RBP24.19■■□□□ 1.46
PDCD2-204ENST00000453163 TPCN1Q9ULQ1 816 aa24.19■■□□□ 1.46
PDCD2-204ENST00000453163 DOT1LQ8TEK3 1739 aa24.19■■□□□ 1.46
PDCD2-204ENST00000453163 BLOC1S2Q6QNY1 142 aa24.19■■□□□ 1.46
PDCD2-204ENST00000453163 PAG1Q9NWQ8 432 aa24.19■■□□□ 1.46
PDCD2-204ENST00000453163 HMG20BQ9P0W2 317 aa24.19■■□□□ 1.46
PDCD2-204ENST00000453163 PALLDQ8WX93 1383 aa24.18■■□□□ 1.46
PDCD2-204ENST00000453163 CYP19A1P11511 503 aaPredicted RBP24.18■■□□□ 1.46
PDCD2-204ENST00000453163 GPTP24298 496 aa24.18■■□□□ 1.46
PDCD2-204ENST00000453163 ZNF445P59923 1031 aa24.18■■□□□ 1.46
PDCD2-204ENST00000453163 USPL1Q5W0Q7 1092 aa24.18■■□□□ 1.46
PDCD2-204ENST00000453163 GIGYF2Q6Y7W6 1299 aaKnown RBP24.18■■□□□ 1.46
PDCD2-204ENST00000453163 SYNE4Q8N205 404 aa24.18■■□□□ 1.46
PDCD2-204ENST00000453163 GDPD2Q9HCC8 539 aa24.18■■□□□ 1.46
PDCD2-204ENST00000453163 ANKRD36CQ5JPF3 1778 aa24.18■■□□□ 1.46
PDCD2-204ENST00000453163 SLFNL1Q499Z3 407 aa24.18■■□□□ 1.46
PDCD2-204ENST00000453163 MCMDC2Q4G0Z9 681 aa24.18■■□□□ 1.46
PDCD2-204ENST00000453163 NECAB1Q8N987 351 aa24.18■■□□□ 1.46
PDCD2-204ENST00000453163 ZBTB1Q9Y2K1 713 aa24.18■■□□□ 1.46
PDCD2-204ENST00000453163 STX6O43752 255 aa24.18■■□□□ 1.46
PDCD2-204ENST00000453163 GJB2P29033 226 aa24.18■■□□□ 1.46
PDCD2-204ENST00000453163 ZBTB38Q8NAP3 1195 aaPredicted RBP24.18■■□□□ 1.46
PDCD2-204ENST00000453163 ZSCAN22P10073 491 aaPredicted RBP24.17■■□□□ 1.46
PDCD2-204ENST00000453163 RPS6KB1P23443 525 aa24.17■■□□□ 1.46
PDCD2-204ENST00000453163 NAP1L5Q96NT1 182 aaPredicted RBP24.17■■□□□ 1.46
PDCD2-204ENST00000453163 TMEM63CQ9P1W3 806 aa24.17■■□□□ 1.46
PDCD2-204ENST00000453163 SH3TC1Q8TE82 1336 aa24.16■■□□□ 1.46
PDCD2-204ENST00000453163 TSGA10IPQ3SY00 556 aa24.16■■□□□ 1.46
PDCD2-204ENST00000453163 PLA2G12BQ9BX93 195 aa24.16■■□□□ 1.46
PDCD2-204ENST00000453163 CEP126Q9P2H0 1117 aa24.16■■□□□ 1.46
PDCD2-204ENST00000453163 NUP98P52948 1817 aa24.16■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms