RNA–Protein interactions for RNA: ENST00000449190.5

RFX3-207, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-207ENST00000449190 DNAAF4Q8WXU2 420 aa11.63□□□□□ -0.55
RFX3-207ENST00000449190 ARHGAP45Q92619 1136 aa11.63□□□□□ -0.55
RFX3-207ENST00000449190 RBM17Q96I25 401 aaKnown RBP11.63□□□□□ -0.55
RFX3-207ENST00000449190 CRAMP1Q96RY5 1269 aa11.63□□□□□ -0.55
RFX3-207ENST00000449190 GPBP1L1Q9HC44 474 aaPredicted RBP11.63□□□□□ -0.55
RFX3-207ENST00000449190 RNF181Q9P0P0 153 aa11.63□□□□□ -0.55
RFX3-207ENST00000449190 TRMT112Q9UI30 125 aaKnown RBP11.63□□□□□ -0.55
RFX3-207ENST00000449190 ZKSCAN2Q63HK3 967 aa11.62□□□□□ -0.55
RFX3-207ENST00000449190 SLC4A10Q6U841 1118 aa11.62□□□□□ -0.55
RFX3-207ENST00000449190 RPGRQ92834 1020 aaKnown RBP11.62□□□□□ -0.55
RFX3-207ENST00000449190 MYD88Q99836 296 aa11.62□□□□□ -0.55
RFX3-207ENST00000449190 METTL22Q9BUU2 404 aaPredicted RBP11.62□□□□□ -0.55
RFX3-207ENST00000449190 SH3TC1Q8TE82 1336 aa11.61□□□□□ -0.55
RFX3-207ENST00000449190 LTBP3Q9NS15 1303 aa11.61□□□□□ -0.55
RFX3-207ENST00000449190 BRCA1P38398 1863 aaKnown RBP11.61□□□□□ -0.55
RFX3-207ENST00000449190 RIC1Q4ADV7 1423 aa11.61□□□□□ -0.55
RFX3-207ENST00000449190 NUP98P52948 1817 aa11.61□□□□□ -0.55
RFX3-207ENST00000449190 ATP5J2-PTCD1G3V325 749 aa11.61□□□□□ -0.55
RFX3-207ENST00000449190 NFKBIEO00221 500 aa11.61□□□□□ -0.55
RFX3-207ENST00000449190 RASSF7Q02833 373 aa11.61□□□□□ -0.55
RFX3-207ENST00000449190 GRIPAP1Q4V328 841 aa11.61□□□□□ -0.55
RFX3-207ENST00000449190 CC2D2BQ6DHV5 1058 aa11.61□□□□□ -0.55
RFX3-207ENST00000449190 RTKN2Q8IZC4 609 aa11.61□□□□□ -0.55
RFX3-207ENST00000449190 ABCC12Q96J65 1359 aa11.61□□□□□ -0.55
RFX3-207ENST00000449190 ANKRD31Q8N7Z5 1873 aa11.61□□□□□ -0.55
RFX3-207ENST00000449190 ARFGEF1Q9Y6D6 1849 aa11.6□□□□□ -0.55
RFX3-207ENST00000449190 F6X3S4 739 aa11.6□□□□□ -0.55
RFX3-207ENST00000449190 CENPBP07199 599 aaPredicted RBP11.6□□□□□ -0.55
RFX3-207ENST00000449190 PRELPP51888 382 aa11.6□□□□□ -0.55
RFX3-207ENST00000449190 CCDC93Q567U6 631 aa11.6□□□□□ -0.55
RFX3-207ENST00000449190 ATF7IPQ6VMQ6 1270 aa11.6□□□□□ -0.55
RFX3-207ENST00000449190 SYNE4Q8N205 404 aa11.6□□□□□ -0.55
RFX3-207ENST00000449190 CCDC191Q8NCU4 936 aa11.6□□□□□ -0.55
RFX3-207ENST00000449190 TAOK3Q9H2K8 898 aa11.6□□□□□ -0.55
RFX3-207ENST00000449190 ZC3H4Q9UPT8 1303 aaKnown RBP11.6□□□□□ -0.55
RFX3-207ENST00000449190 BBOX1O75936 387 aa11.59□□□□□ -0.55
RFX3-207ENST00000449190 HCLS1P14317 486 aaPredicted RBP11.59□□□□□ -0.55
RFX3-207ENST00000449190 HSP90B1P14625 803 aaKnown RBP11.59□□□□□ -0.55
RFX3-207ENST00000449190 CCT4P50991 539 aaKnown RBP11.59□□□□□ -0.55
RFX3-207ENST00000449190 C3orf67Q6ZVT6 689 aa11.59□□□□□ -0.55
RFX3-207ENST00000449190 FTSJ3Q8IY81 847 aaKnown RBP11.59□□□□□ -0.55
RFX3-207ENST00000449190 ZBTB38Q8NAP3 1195 aaPredicted RBP11.59□□□□□ -0.55
RFX3-207ENST00000449190 LINS1Q8NG48 757 aa11.59□□□□□ -0.55
RFX3-207ENST00000449190 ZNF526Q8TF50 670 aaPredicted RBP11.59□□□□□ -0.55
RFX3-207ENST00000449190 FAM89AQ96GI7 184 aa11.59□□□□□ -0.55
RFX3-207ENST00000449190 SRCIN1Q9C0H9 1055 aa11.59□□□□□ -0.55
RFX3-207ENST00000449190 CWC25Q9NXE8 425 aaPredicted RBP11.59□□□□□ -0.55
RFX3-207ENST00000449190 C1QTNF8P60827 252 aa11.58□□□□□ -0.56
RFX3-207ENST00000449190 FKBP4Q02790 459 aaKnown RBP eCLIP11.58□□□□□ -0.56
RFX3-207ENST00000449190 SF3B3Q15393 1217 aaKnown RBP11.58□□□□□ -0.56
RFX3-207ENST00000449190 DPY19L2Q6NUT2 758 aa11.58□□□□□ -0.56
RFX3-207ENST00000449190 DDX46Q7L014 1031 aaKnown RBP11.58□□□□□ -0.56
RFX3-207ENST00000449190 DZIP1LQ8IYY4 767 aaKnown RBP11.58□□□□□ -0.56
RFX3-207ENST00000449190 TMX4Q9H1E5 349 aaPredicted RBP11.58□□□□□ -0.56
RFX3-207ENST00000449190 CREBZFQ9NS37 354 aa11.58□□□□□ -0.56
RFX3-207ENST00000449190 KDM2BQ8NHM5 1336 aa11.58□□□□□ -0.56
RFX3-207ENST00000449190 DLEC1Q9Y238 1755 aa11.57□□□□□ -0.56
RFX3-207ENST00000449190 GLTPD2A6NH11 291 aa11.57□□□□□ -0.56
RFX3-207ENST00000449190 IRS4O14654 1257 aaPredicted RBP11.57□□□□□ -0.56
RFX3-207ENST00000449190 KIF3CO14782 793 aa11.57□□□□□ -0.56
RFX3-207ENST00000449190 ALDH1L1O75891 902 aa11.57□□□□□ -0.56
RFX3-207ENST00000449190 PCCAP05165 728 aaPredicted RBP11.57□□□□□ -0.56
RFX3-207ENST00000449190 BEND3Q5T5X7 828 aa11.57□□□□□ -0.56
RFX3-207ENST00000449190 POTEGQ6S5H5 508 aa11.57□□□□□ -0.56
RFX3-207ENST00000449190 SP8Q8IXZ3 490 aa11.57□□□□□ -0.56
RFX3-207ENST00000449190 CLUAP1Q96AJ1 413 aa11.57□□□□□ -0.56
RFX3-207ENST00000449190 PSMD1Q99460 953 aa11.57□□□□□ -0.56
RFX3-207ENST00000449190 C9orf78Q9NZ63 289 aaPredicted RBP11.57□□□□□ -0.56
RFX3-207ENST00000449190 SLX4Q8IY92 1834 aa11.56□□□□□ -0.56
RFX3-207ENST00000449190 NEURL1BA8MQ27 555 aa11.56□□□□□ -0.56
RFX3-207ENST00000449190 IGKV5-2P06315 115 aa11.56□□□□□ -0.56
RFX3-207ENST00000449190 TRIM27P14373 513 aa11.56□□□□□ -0.56
RFX3-207ENST00000449190 HDAC5Q9UQL6 1122 aa11.56□□□□□ -0.56
RFX3-207ENST00000449190 ATP6V0A2Q9Y487 856 aa11.56□□□□□ -0.56
RFX3-207ENST00000449190 PPEF1O14829 653 aaPredicted RBP11.55□□□□□ -0.56
RFX3-207ENST00000449190 PLIN1O60240 522 aa11.55□□□□□ -0.56
RFX3-207ENST00000449190 GRAPQ13588 217 aa11.55□□□□□ -0.56
RFX3-207ENST00000449190 GCKRQ14397 625 aa11.55□□□□□ -0.56
RFX3-207ENST00000449190 CWF19L2Q2TBE0 894 aaKnown RBP11.55□□□□□ -0.56
RFX3-207ENST00000449190 OLFM4Q6UX06 510 aa11.55□□□□□ -0.56
RFX3-207ENST00000449190 TMC4Q7Z404 712 aa11.55□□□□□ -0.56
RFX3-207ENST00000449190 GRAPLQ8TC17 118 aaPredicted RBP11.55□□□□□ -0.56
RFX3-207ENST00000449190 VPS33BQ9H267 617 aa11.55□□□□□ -0.56
RFX3-207ENST00000449190 RRAGCQ9HB90 399 aa11.55□□□□□ -0.56
RFX3-207ENST00000449190 H7C1W4 665 aa11.54□□□□□ -0.56
RFX3-207ENST00000449190 PDE8AO60658 829 aa11.54□□□□□ -0.56
RFX3-207ENST00000449190 IARSP41252 1262 aaKnown RBP11.54□□□□□ -0.56
RFX3-207ENST00000449190 PDE3AQ14432 1141 aa11.54□□□□□ -0.56
RFX3-207ENST00000449190 RTL5Q5HYW3 569 aaPredicted RBP11.54□□□□□ -0.56
RFX3-207ENST00000449190 INTS3Q68E01 1043 aaKnown RBP11.54□□□□□ -0.56
RFX3-207ENST00000449190 CHMP4BQ9H444 224 aaKnown RBP11.54□□□□□ -0.56
RFX3-207ENST00000449190 NMRK2Q9NPI5 230 aa11.54□□□□□ -0.56
RFX3-207ENST00000449190 ZNF277Q9NRM2 450 aaPredicted RBP11.54□□□□□ -0.56
RFX3-207ENST00000449190 SUPT16HQ9Y5B9 1047 aaKnown RBP11.54□□□□□ -0.56
RFX3-207ENST00000449190 COL11A2P13942 1736 aaPredicted RBP11.54□□□□□ -0.56
RFX3-207ENST00000449190 ABCC4O15439 1325 aa11.54□□□□□ -0.56
RFX3-207ENST00000449190 CDHR2Q9BYE9 1310 aa11.54□□□□□ -0.56
RFX3-207ENST00000449190 GRM8O00222 908 aa11.53□□□□□ -0.56
RFX3-207ENST00000449190 TOMM70O94826 608 aa11.53□□□□□ -0.56
RFX3-207ENST00000449190 VEGFAP15692 232 aaPredicted RBP11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms