RNA–Protein interactions for RNA: ENST00000446349.5

PTPN3-204, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,630 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-204ENST00000446349 MAGI2Q86UL8 1455 aa9.84□□□□□ -0.83
PTPN3-204ENST00000446349 GOLGA6L9A6NEM1 432 aa9.84□□□□□ -0.83
PTPN3-204ENST00000446349 DKC1O60832 514 aaKnown RBP eCLIP9.84□□□□□ -0.83
PTPN3-204ENST00000446349 WTAPQ15007 396 aa9.84□□□□□ -0.83
PTPN3-204ENST00000446349 ZNF771Q7L3S4 317 aaPredicted RBP9.84□□□□□ -0.83
PTPN3-204ENST00000446349 STX6O43752 255 aa9.84□□□□□ -0.83
PTPN3-204ENST00000446349 KDM4AO75164 1064 aa9.84□□□□□ -0.83
PTPN3-204ENST00000446349 DDX19AQ9NUU7 478 aaKnown RBP9.84□□□□□ -0.83
PTPN3-204ENST00000446349 PI4KAP2A4QPH2 592 aa9.84□□□□□ -0.83
PTPN3-204ENST00000446349 TBCAO75347 108 aaKnown RBP9.84□□□□□ -0.83
PTPN3-204ENST00000446349 PI4KAP1Q8N8J0 262 aa9.84□□□□□ -0.83
PTPN3-204ENST00000446349 PNMA2Q9UL42 364 aa9.84□□□□□ -0.83
PTPN3-204ENST00000446349 METAP2P50579 478 aaKnown RBP eCLIP9.83□□□□□ -0.84
PTPN3-204ENST00000446349 C6orf50Q9HD87 102 aa9.83□□□□□ -0.84
PTPN3-204ENST00000446349 ARHGAP29Q52LW3 1261 aa9.83□□□□□ -0.84
PTPN3-204ENST00000446349 LINS1Q8NG48 757 aa9.83□□□□□ -0.84
PTPN3-204ENST00000446349 SIRT1Q96EB6 747 aa9.83□□□□□ -0.84
PTPN3-204ENST00000446349 TRAPPC8Q9Y2L5 1435 aa9.83□□□□□ -0.84
PTPN3-204ENST00000446349 TTC41PQ6P2S7 1318 aa9.83□□□□□ -0.84
PTPN3-204ENST00000446349 IFIT1BQ5T764 474 aaKnown RBP9.83□□□□□ -0.84
PTPN3-204ENST00000446349 TTLL5Q6EMB2 1281 aa9.83□□□□□ -0.84
PTPN3-204ENST00000446349 SPINK5Q9NQ38 1064 aaPredicted RBP9.83□□□□□ -0.84
PTPN3-204ENST00000446349 BAG6P46379 1132 aa9.83□□□□□ -0.84
PTPN3-204ENST00000446349 TTC6Q86TZ1 520 aa9.83□□□□□ -0.84
PTPN3-204ENST00000446349 SYCP3Q8IZU3 236 aa9.83□□□□□ -0.84
PTPN3-204ENST00000446349 POLR3AO14802 1390 aaPredicted RBP9.83□□□□□ -0.84
PTPN3-204ENST00000446349 PABPN1LA6NDY0 278 aaKnown RBP9.83□□□□□ -0.84
PTPN3-204ENST00000446349 MIS18AQ9NYP9 233 aa9.83□□□□□ -0.84
PTPN3-204ENST00000446349 DENND2AQ9ULE3 1009 aa9.83□□□□□ -0.84
PTPN3-204ENST00000446349 EIF6P56537 245 aaKnown RBP9.83□□□□□ -0.84
PTPN3-204ENST00000446349 BMP2KLQ5H9B9 411 aa9.82□□□□□ -0.84
PTPN3-204ENST00000446349 MSANTD4Q8NCY6 345 aa9.82□□□□□ -0.84
PTPN3-204ENST00000446349 BEGAINQ9BUH8 593 aa9.82□□□□□ -0.84
PTPN3-204ENST00000446349 NAA15Q9BXJ9 866 aaKnown RBP9.82□□□□□ -0.84
PTPN3-204ENST00000446349 PRPHP41219 470 aa9.82□□□□□ -0.84
PTPN3-204ENST00000446349 CCDC183Q5T5S1 534 aa9.82□□□□□ -0.84
PTPN3-204ENST00000446349 PRPF40BQ6NWY9 871 aaKnown RBP9.82□□□□□ -0.84
PTPN3-204ENST00000446349 LEKR1Q6ZMV7 388 aa9.82□□□□□ -0.84
PTPN3-204ENST00000446349 CCDC87Q9NVE4 849 aa9.82□□□□□ -0.84
PTPN3-204ENST00000446349 NEK1Q96PY6 1258 aa9.82□□□□□ -0.84
PTPN3-204ENST00000446349 SSR1P43307 286 aaKnown RBP9.82□□□□□ -0.84
PTPN3-204ENST00000446349 ARHGEF6Q15052 776 aa9.82□□□□□ -0.84
PTPN3-204ENST00000446349 KCNG1Q9UIX4 513 aa9.82□□□□□ -0.84
PTPN3-204ENST00000446349 SAMM50Q9Y512 469 aa9.82□□□□□ -0.84
PTPN3-204ENST00000446349 ALDH1B1P30837 517 aa9.82□□□□□ -0.84
PTPN3-204ENST00000446349 CNNM3Q8NE01 707 aa9.82□□□□□ -0.84
PTPN3-204ENST00000446349 KDM5AP29375 1690 aaKnown RBP9.82□□□□□ -0.84
PTPN3-204ENST00000446349 GNA11P29992 359 aa9.82□□□□□ -0.84
PTPN3-204ENST00000446349 PPP1R2P41236 205 aa9.82□□□□□ -0.84
PTPN3-204ENST00000446349 RBM25P49756 843 aaKnown RBP9.82□□□□□ -0.84
PTPN3-204ENST00000446349 TBC1D5Q92609 795 aa9.82□□□□□ -0.84
PTPN3-204ENST00000446349 GCP02774 474 aa9.82□□□□□ -0.84
PTPN3-204ENST00000446349 NFKBIBQ15653 356 aa9.82□□□□□ -0.84
PTPN3-204ENST00000446349 EHBP1Q8NDI1 1231 aa9.82□□□□□ -0.84
PTPN3-204ENST00000446349 RBM28Q9NW13 759 aaKnown RBP9.82□□□□□ -0.84
PTPN3-204ENST00000446349 SPDYE3A6NKU9 549 aa9.81□□□□□ -0.84
PTPN3-204ENST00000446349 YEATS4O95619 227 aa9.81□□□□□ -0.84
PTPN3-204ENST00000446349 CYP7A1P22680 504 aa9.81□□□□□ -0.84
PTPN3-204ENST00000446349 CHRNA2Q15822 529 aa9.81□□□□□ -0.84
PTPN3-204ENST00000446349 CFAP100Q494V2 611 aa9.81□□□□□ -0.84
PTPN3-204ENST00000446349 DDX11Q96FC9 970 aa9.81□□□□□ -0.84
PTPN3-204ENST00000446349 SBNO1A3KN83 1393 aa9.81□□□□□ -0.84
PTPN3-204ENST00000446349 YEATS2Q9ULM3 1422 aa9.81□□□□□ -0.84
PTPN3-204ENST00000446349 STAMBPO95630 424 aa9.81□□□□□ -0.84
PTPN3-204ENST00000446349 CALRP27797 417 aaKnown RBP9.81□□□□□ -0.84
PTPN3-204ENST00000446349 GSDMDP57764 484 aa9.81□□□□□ -0.84
PTPN3-204ENST00000446349 BACH2Q9BYV9 841 aa9.81□□□□□ -0.84
PTPN3-204ENST00000446349 CCDC8Q9H0W5 538 aaPredicted RBP9.81□□□□□ -0.84
PTPN3-204ENST00000446349 CEP170Q5SW79 1584 aa9.81□□□□□ -0.84
PTPN3-204ENST00000446349 AXDND1Q5T1B0 1012 aaPredicted RBP9.81□□□□□ -0.84
PTPN3-204ENST00000446349 IMPG2Q9BZV3 1241 aa9.81□□□□□ -0.84
PTPN3-204ENST00000446349 MAGEB6P1A0A0J9YX57 407 aa9.81□□□□□ -0.84
PTPN3-204ENST00000446349 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.81□□□□□ -0.84
PTPN3-204ENST00000446349 LDHBP07195 334 aaKnown RBP9.81□□□□□ -0.84
PTPN3-204ENST00000446349 ENOX2Q16206 610 aaKnown RBP9.81□□□□□ -0.84
PTPN3-204ENST00000446349 MCMDC2Q4G0Z9 681 aa9.81□□□□□ -0.84
PTPN3-204ENST00000446349 ARHGEF5Q12774 1597 aa9.81□□□□□ -0.84
PTPN3-204ENST00000446349 CNBD1Q8NA66 436 aa9.81□□□□□ -0.84
PTPN3-204ENST00000446349 CTAGE1Q96RT6 745 aa9.81□□□□□ -0.84
PTPN3-204ENST00000446349 PICK1Q9NRD5 415 aa9.81□□□□□ -0.84
PTPN3-204ENST00000446349 H0YHG0 523 aa9.8□□□□□ -0.84
PTPN3-204ENST00000446349 KIF5CO60282 957 aa9.8□□□□□ -0.84
PTPN3-204ENST00000446349 XAGE3Q8WTP9 111 aa9.8□□□□□ -0.84
PTPN3-204ENST00000446349 GCOM1H8Y6P7 765 aaPredicted RBP9.8□□□□□ -0.84
PTPN3-204ENST00000446349 MYZAPP0CAP1 466 aa9.8□□□□□ -0.84
PTPN3-204ENST00000446349 TMOD4Q9NZQ9 345 aa9.8□□□□□ -0.84
PTPN3-204ENST00000446349 ZBTB43O43298 467 aa9.8□□□□□ -0.84
PTPN3-204ENST00000446349 TSPOAP1O95153 1857 aa9.8□□□□□ -0.84
PTPN3-204ENST00000446349 PAFAH1B1P43034 410 aa9.8□□□□□ -0.84
PTPN3-204ENST00000446349 ALS2CR12Q96Q35 445 aa9.8□□□□□ -0.84
PTPN3-204ENST00000446349 ARHGEF10LQ9HCE6 1279 aa9.8□□□□□ -0.84
PTPN3-204ENST00000446349 MBIPQ9NS73 344 aa9.8□□□□□ -0.84
PTPN3-204ENST00000446349 H0YIN7 160 aa9.8□□□□□ -0.84
PTPN3-204ENST00000446349 MAP3K9P80192 1104 aa9.8□□□□□ -0.84
PTPN3-204ENST00000446349 PDCL2Q8N4E4 241 aa9.8□□□□□ -0.84
PTPN3-204ENST00000446349 CCDC171Q6TFL3 1326 aa9.8□□□□□ -0.84
PTPN3-204ENST00000446349 SFPQP23246 707 aaKnown RBP eCLIP9.8□□□□□ -0.84
PTPN3-204ENST00000446349 SPAG1Q07617 926 aa9.8□□□□□ -0.84
PTPN3-204ENST00000446349 WDR66Q8TBY9 1149 aa9.8□□□□□ -0.84
PTPN3-204ENST00000446349 RRP36Q96EU6 259 aaKnown RBP9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 129 ms