RNA–Protein interactions for RNA: ENST00000440705.6

VRK2-207, Transcript of vaccinia related kinase 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VRK2, Length 1,676 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-207ENST00000440705 AOX1Q06278 1338 aa24.85■■□□□ 1.57
VRK2-207ENST00000440705 RBM19Q9Y4C8 960 aaKnown RBP24.85■■□□□ 1.57
VRK2-207ENST00000440705 ANKRD18BA2A2Z9 1011 aa24.83■■□□□ 1.57
VRK2-207ENST00000440705 IFIT2P09913 472 aaKnown RBP24.83■■□□□ 1.57
VRK2-207ENST00000440705 HCLS1P14317 486 aaPredicted RBP24.83■■□□□ 1.57
VRK2-207ENST00000440705 IL15P40933 162 aaPredicted RBP24.83■■□□□ 1.57
VRK2-207ENST00000440705 TAF7LQ5H9L4 462 aa24.83■■□□□ 1.57
VRK2-207ENST00000440705 NUTM1Q86Y26 1132 aa24.83■■□□□ 1.57
VRK2-207ENST00000440705 LAMB2P55268 1798 aa24.82■■□□□ 1.56
VRK2-207ENST00000440705 EYA2O00167 538 aa24.82■■□□□ 1.56
VRK2-207ENST00000440705 ITGA6P23229 1130 aa24.82■■□□□ 1.56
VRK2-207ENST00000440705 AKT1S1Q96B36 256 aa24.82■■□□□ 1.56
VRK2-207ENST00000440705 GREM2Q9H772 168 aa24.82■■□□□ 1.56
VRK2-207ENST00000440705 TFCP2L1Q9NZI6 479 aa24.82■■□□□ 1.56
VRK2-207ENST00000440705 COL24A1Q17RW2 1714 aa24.82■■□□□ 1.56
VRK2-207ENST00000440705 GSPT1P15170 499 aaKnown RBP24.81■■□□□ 1.56
VRK2-207ENST00000440705 GTF2E1P29083 439 aaPredicted RBP24.81■■□□□ 1.56
VRK2-207ENST00000440705 TPTE2Q6XPS3 522 aa24.81■■□□□ 1.56
VRK2-207ENST00000440705 CCDC85AQ96PX6 553 aaPredicted RBP24.81■■□□□ 1.56
VRK2-207ENST00000440705 DDX60Q8IY21 1712 aaKnown RBP24.81■■□□□ 1.56
VRK2-207ENST00000440705 ATG9AQ7Z3C6 839 aa24.81■■□□□ 1.56
VRK2-207ENST00000440705 AACSQ86V21 672 aa24.81■■□□□ 1.56
VRK2-207ENST00000440705 NBPF5PQ86XG9 351 aaPredicted RBP24.81■■□□□ 1.56
VRK2-207ENST00000440705 ZNF594Q96JF6 807 aaPredicted RBP24.81■■□□□ 1.56
VRK2-207ENST00000440705 CCDC152Q4G0S7 254 aa24.8■■□□□ 1.56
VRK2-207ENST00000440705 SLC10A5Q5PT55 438 aa24.8■■□□□ 1.56
VRK2-207ENST00000440705 GPATCH3Q96I76 525 aa24.8■■□□□ 1.56
VRK2-207ENST00000440705 TTC41PQ6P2S7 1318 aa24.79■■□□□ 1.56
VRK2-207ENST00000440705 TFCP2Q12800 502 aa24.79■■□□□ 1.56
VRK2-207ENST00000440705 ERFEQ4G0M1 354 aa24.79■■□□□ 1.56
VRK2-207ENST00000440705 FLAD1Q8NFF5 587 aa24.79■■□□□ 1.56
VRK2-207ENST00000440705 GYS1P13807 737 aa24.78■■□□□ 1.56
VRK2-207ENST00000440705 SF3B2Q13435 895 aaKnown RBP24.78■■□□□ 1.56
VRK2-207ENST00000440705 ZNF827Q17R98 1081 aa24.78■■□□□ 1.56
VRK2-207ENST00000440705 EAF2Q96CJ1 260 aaPredicted RBP24.78■■□□□ 1.56
VRK2-207ENST00000440705 CARMIL3Q8ND23 1372 aa24.78■■□□□ 1.56
VRK2-207ENST00000440705 LRRC24Q50LG9 513 aa24.78■■□□□ 1.56
VRK2-207ENST00000440705 CAMKK2Q96RR4 588 aa24.78■■□□□ 1.56
VRK2-207ENST00000440705 GPR108Q9NPR9 543 aa24.78■■□□□ 1.56
VRK2-207ENST00000440705 RTL9Q8NET4 1388 aa24.77■■□□□ 1.56
VRK2-207ENST00000440705 NFIXQ14938 502 aa24.77■■□□□ 1.56
VRK2-207ENST00000440705 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP24.77■■□□□ 1.56
VRK2-207ENST00000440705 ERC2O15083 957 aa24.76■■□□□ 1.55
VRK2-207ENST00000440705 TNNI3KQ59H18 835 aa24.76■■□□□ 1.55
VRK2-207ENST00000440705 LDHAL6AQ6ZMR3 332 aa24.76■■□□□ 1.55
VRK2-207ENST00000440705 ECHDC1Q9NTX5 307 aa24.76■■□□□ 1.55
VRK2-207ENST00000440705 FPGT-TNNI3KV9GXZ4 949 aa24.76■■□□□ 1.55
VRK2-207ENST00000440705 SDSP20132 328 aa24.75■■□□□ 1.55
VRK2-207ENST00000440705 TSHZ3Q63HK5 1081 aa24.75■■□□□ 1.55
VRK2-207ENST00000440705 PUS3Q9BZE2 481 aaKnown RBP24.75■■□□□ 1.55
VRK2-207ENST00000440705 CEP126Q9P2H0 1117 aa24.75■■□□□ 1.55
VRK2-207ENST00000440705 EN1Q05925 392 aaPredicted RBP24.75■■□□□ 1.55
VRK2-207ENST00000440705 SF3B3Q15393 1217 aaKnown RBP24.75■■□□□ 1.55
VRK2-207ENST00000440705 ILDR1Q86SU0 546 aaPredicted RBP24.75■■□□□ 1.55
VRK2-207ENST00000440705 CCDC8Q9H0W5 538 aaPredicted RBP24.75■■□□□ 1.55
VRK2-207ENST00000440705 NPHP1O15259 732 aa24.74■■□□□ 1.55
VRK2-207ENST00000440705 CDC45O75419 566 aa24.74■■□□□ 1.55
VRK2-207ENST00000440705 GLRX3O76003 335 aaKnown RBP24.74■■□□□ 1.55
VRK2-207ENST00000440705 BAG6P46379 1132 aa24.74■■□□□ 1.55
VRK2-207ENST00000440705 EZH2Q15910 746 aaKnown RBP24.74■■□□□ 1.55
VRK2-207ENST00000440705 PI4K2BQ8TCG2 481 aa24.74■■□□□ 1.55
VRK2-207ENST00000440705 NLRP3Q96P20 1036 aa24.73■■□□□ 1.55
VRK2-207ENST00000440705 CNNM1Q9NRU3 951 aa24.73■■□□□ 1.55
VRK2-207ENST00000440705 RIPOR2Q9Y4F9 1068 aa24.73■■□□□ 1.55
VRK2-207ENST00000440705 TM4SF1P30408 202 aa24.72■■□□□ 1.55
VRK2-207ENST00000440705 AKAP2Q9Y2D5 859 aa24.72■■□□□ 1.55
VRK2-207ENST00000440705 COL23A1Q86Y22 540 aaPredicted RBP24.72■■□□□ 1.55
VRK2-207ENST00000440705 ABCC12Q96J65 1359 aa24.71■■□□□ 1.55
VRK2-207ENST00000440705 EIF5BO60841 1220 aaKnown RBP24.71■■□□□ 1.55
VRK2-207ENST00000440705 CNBD1Q8NA66 436 aa24.71■■□□□ 1.55
VRK2-207ENST00000440705 CDC5LQ99459 802 aaKnown RBP24.71■■□□□ 1.55
VRK2-207ENST00000440705 MPHOSPH8Q99549 860 aa24.71■■□□□ 1.55
VRK2-207ENST00000440705 TUBGCP6Q96RT7 1819 aa24.71■■□□□ 1.55
VRK2-207ENST00000440705 MSH5O43196 834 aa24.7■■□□□ 1.54
VRK2-207ENST00000440705 CASC1Q6TDU7 716 aa24.7■■□□□ 1.54
VRK2-207ENST00000440705 TBC1D9Q6ZT07 1266 aa24.7■■□□□ 1.54
VRK2-207ENST00000440705 NLGN1Q8N2Q7 840 aa24.7■■□□□ 1.54
VRK2-207ENST00000440705 TRIM6-TRIM34B2RNG4 842 aa24.69■■□□□ 1.54
VRK2-207ENST00000440705 IGHMBP2P38935 993 aaKnown RBP24.69■■□□□ 1.54
VRK2-207ENST00000440705 METTL24Q5JXM2 366 aa24.69■■□□□ 1.54
VRK2-207ENST00000440705 UPF2Q9HAU5 1272 aaKnown RBP24.69■■□□□ 1.54
VRK2-207ENST00000440705 SEC31BQ9NQW1 1179 aa24.69■■□□□ 1.54
VRK2-207ENST00000440705 TLR7Q9NYK1 1049 aaKnown RBP24.69■■□□□ 1.54
VRK2-207ENST00000440705 SEC24BO95487 1268 aa24.69■■□□□ 1.54
VRK2-207ENST00000440705 DBNLQ9UJU6 430 aaKnown RBP24.69■■□□□ 1.54
VRK2-207ENST00000440705 LRP5O75197 1615 aa24.68■■□□□ 1.54
VRK2-207ENST00000440705 SERPINB2P05120 415 aa24.68■■□□□ 1.54
VRK2-207ENST00000440705 CCDC125Q86Z20 511 aa24.68■■□□□ 1.54
VRK2-207ENST00000440705 RILPL2Q969X0 211 aa24.68■■□□□ 1.54
VRK2-207ENST00000440705 NEUROD6Q96NK8 337 aa24.68■■□□□ 1.54
VRK2-207ENST00000440705 STK32BQ9NY57 414 aa24.68■■□□□ 1.54
VRK2-207ENST00000440705 MROH5Q6ZUA9 1318 aa24.68■■□□□ 1.54
VRK2-207ENST00000440705 SLC15A2Q16348 729 aa24.67■■□□□ 1.54
VRK2-207ENST00000440705 C3orf67Q6ZVT6 689 aa24.67■■□□□ 1.54
VRK2-207ENST00000440705 PNPLA7Q6ZV29 1317 aa24.67■■□□□ 1.54
VRK2-207ENST00000440705 ZNF609O15014 1411 aa24.67■■□□□ 1.54
VRK2-207ENST00000440705 CASZ1Q86V15 1759 aa24.66■■□□□ 1.54
VRK2-207ENST00000440705 A0A1B0GUL7 405 aa24.66■■□□□ 1.54
VRK2-207ENST00000440705 TIMM10P62072 90 aa24.66■■□□□ 1.54
VRK2-207ENST00000440705 CNTROBQ8N137 903 aa24.66■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms