RNA–Protein interactions for RNA: ENST00000439487.5

SEMA3B-206, Transcript of semaphorin 3B, humanhuman

TSL 3

Gene SEMA3B, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-206ENST00000439487 C9orf78Q9NZ63 289 aaPredicted RBP24.65■■□□□ 1.54
SEMA3B-206ENST00000439487 RASSF7Q02833 373 aa24.64■■□□□ 1.54
SEMA3B-206ENST00000439487 ARHGAP45Q92619 1136 aa24.64■■□□□ 1.54
SEMA3B-206ENST00000439487 COL4A1P02462 1669 aa24.64■■□□□ 1.53
SEMA3B-206ENST00000439487 GRM8O00222 908 aa24.63■■□□□ 1.53
SEMA3B-206ENST00000439487 PPEF1O14829 653 aaPredicted RBP24.63■■□□□ 1.53
SEMA3B-206ENST00000439487 GRAPQ13588 217 aa24.63■■□□□ 1.53
SEMA3B-206ENST00000439487 SLC51AQ86UW1 340 aa24.63■■□□□ 1.53
SEMA3B-206ENST00000439487 GRAPLQ8TC17 118 aaPredicted RBP24.63■■□□□ 1.53
SEMA3B-206ENST00000439487 SPEF2Q9C093 1822 aa24.63■■□□□ 1.53
SEMA3B-206ENST00000439487 IPO8O15397 1037 aaKnown RBP24.62■■□□□ 1.53
SEMA3B-206ENST00000439487 CTSWP56202 376 aa24.62■■□□□ 1.53
SEMA3B-206ENST00000439487 CCDC152Q4G0S7 254 aa24.62■■□□□ 1.53
SEMA3B-206ENST00000439487 SOGA3Q5TF21 947 aa24.62■■□□□ 1.53
SEMA3B-206ENST00000439487 PLA2G12BQ9BX93 195 aa24.62■■□□□ 1.53
SEMA3B-206ENST00000439487 SEC31BQ9NQW1 1179 aa24.62■■□□□ 1.53
SEMA3B-206ENST00000439487 TNNQ9UQP3 1299 aa24.62■■□□□ 1.53
SEMA3B-206ENST00000439487 DICER1Q9UPY3 1922 aaKnown RBP24.61■■□□□ 1.53
SEMA3B-206ENST00000439487 NFKBIEO00221 500 aa24.61■■□□□ 1.53
SEMA3B-206ENST00000439487 CCDC93Q567U6 631 aa24.61■■□□□ 1.53
SEMA3B-206ENST00000439487 TTLL11Q8NHH1 800 aa24.61■■□□□ 1.53
SEMA3B-206ENST00000439487 CELF1Q92879 486 aaKnown RBP24.61■■□□□ 1.53
SEMA3B-206ENST00000439487 BBOX1O75936 387 aa24.6■■□□□ 1.53
SEMA3B-206ENST00000439487 ATF7IPQ6VMQ6 1270 aa24.6■■□□□ 1.53
SEMA3B-206ENST00000439487 NBPF7P0C2Y1 421 aaPredicted RBP24.59■■□□□ 1.53
SEMA3B-206ENST00000439487 TRIM27P14373 513 aa24.59■■□□□ 1.53
SEMA3B-206ENST00000439487 CCT4P50991 539 aaKnown RBP24.59■■□□□ 1.53
SEMA3B-206ENST00000439487 PRELPP51888 382 aa24.58■■□□□ 1.53
SEMA3B-206ENST00000439487 ZKSCAN2Q63HK3 967 aa24.58■■□□□ 1.53
SEMA3B-206ENST00000439487 GREM2Q9H772 168 aa24.58■■□□□ 1.53
SEMA3B-206ENST00000439487 ATP6V0A2Q9Y487 856 aa24.58■■□□□ 1.53
SEMA3B-206ENST00000439487 FOXO4P98177 505 aa24.57■■□□□ 1.52
SEMA3B-206ENST00000439487 EPHA10Q5JZY3 1008 aa24.57■■□□□ 1.52
SEMA3B-206ENST00000439487 C9orf131Q5VYM1 1079 aa24.57■■□□□ 1.52
SEMA3B-206ENST00000439487 RTKN2Q8IZC4 609 aa24.57■■□□□ 1.52
SEMA3B-206ENST00000439487 CLUAP1Q96AJ1 413 aa24.57■■□□□ 1.52
SEMA3B-206ENST00000439487 SUCLG2Q96I99 432 aa24.57■■□□□ 1.52
SEMA3B-206ENST00000439487 USP44Q9H0E7 712 aa24.57■■□□□ 1.52
SEMA3B-206ENST00000439487 TAOK3Q9H2K8 898 aa24.57■■□□□ 1.52
SEMA3B-206ENST00000439487 UTYO14607 1347 aa24.57■■□□□ 1.52
SEMA3B-206ENST00000439487 SNED1Q8TER0 1413 aa24.56■■□□□ 1.52
SEMA3B-206ENST00000439487 CSF1RP07333 972 aa24.56■■□□□ 1.52
SEMA3B-206ENST00000439487 RPS8P62241 208 aaKnown RBP24.56■■□□□ 1.52
SEMA3B-206ENST00000439487 CC2D2BQ6DHV5 1058 aa24.56■■□□□ 1.52
SEMA3B-206ENST00000439487 SP8Q8IXZ3 490 aa24.56■■□□□ 1.52
SEMA3B-206ENST00000439487 LRRC37AA6NMS7 1700 aa24.55■■□□□ 1.52
SEMA3B-206ENST00000439487 IFFO2Q5TF58 517 aa24.55■■□□□ 1.52
SEMA3B-206ENST00000439487 TMX4Q9H1E5 349 aaPredicted RBP24.55■■□□□ 1.52
SEMA3B-206ENST00000439487 RNF181Q9P0P0 153 aa24.55■■□□□ 1.52
SEMA3B-206ENST00000439487 RCAN3Q9UKA8 241 aa24.55■■□□□ 1.52
SEMA3B-206ENST00000439487 LMNB1P20700 586 aa24.54■■□□□ 1.52
SEMA3B-206ENST00000439487 FKBP4Q02790 459 aaKnown RBP eCLIP24.54■■□□□ 1.52
SEMA3B-206ENST00000439487 FAM161AQ3B820 660 aa24.54■■□□□ 1.52
SEMA3B-206ENST00000439487 INTS3Q68E01 1043 aaKnown RBP24.54■■□□□ 1.52
SEMA3B-206ENST00000439487 TMC4Q7Z404 712 aa24.54■■□□□ 1.52
SEMA3B-206ENST00000439487 KAZALD1Q96I82 304 aa24.54■■□□□ 1.52
SEMA3B-206ENST00000439487 LTBP3Q9NS15 1303 aa24.54■■□□□ 1.52
SEMA3B-206ENST00000439487 RTL9Q8NET4 1388 aa24.54■■□□□ 1.52
SEMA3B-206ENST00000439487 LMBR1LQ6UX01 489 aa24.53■■□□□ 1.52
SEMA3B-206ENST00000439487 ANKRD18AQ8IVF6 992 aa24.53■■□□□ 1.52
SEMA3B-206ENST00000439487 CHMP3Q9Y3E7 222 aa24.53■■□□□ 1.52
SEMA3B-206ENST00000439487 ITGA6P23229 1130 aa24.52■■□□□ 1.52
SEMA3B-206ENST00000439487 ZNF784Q8NCA9 323 aaPredicted RBP24.52■■□□□ 1.52
SEMA3B-206ENST00000439487 CDC5LQ99459 802 aaKnown RBP24.52■■□□□ 1.52
SEMA3B-206ENST00000439487 ZNF277Q9NRM2 450 aaPredicted RBP24.52■■□□□ 1.52
SEMA3B-206ENST00000439487 TIAM2Q8IVF5 1701 aa24.52■■□□□ 1.52
SEMA3B-206ENST00000439487 GRIPAP1Q4V328 841 aa24.51■■□□□ 1.51
SEMA3B-206ENST00000439487 MPNDQ8N594 471 aa24.5■■□□□ 1.51
SEMA3B-206ENST00000439487 TMEM57Q8N5G2 664 aa24.5■■□□□ 1.51
SEMA3B-206ENST00000439487 PSMD1Q99460 953 aa24.5■■□□□ 1.51
SEMA3B-206ENST00000439487 BICC1Q9H694 974 aaKnown RBP24.5■■□□□ 1.51
SEMA3B-206ENST00000439487 ANKRD18BA2A2Z9 1011 aa24.49■■□□□ 1.51
SEMA3B-206ENST00000439487 DZIP1LQ8IYY4 767 aaKnown RBP24.49■■□□□ 1.51
SEMA3B-206ENST00000439487 UBTFL1P0CB47 393 aaPredicted RBP24.48■■□□□ 1.51
SEMA3B-206ENST00000439487 IFIT5Q13325 482 aaKnown RBP24.48■■□□□ 1.51
SEMA3B-206ENST00000439487 DPP8Q6V1X1 898 aaPredicted RBP24.48■■□□□ 1.51
SEMA3B-206ENST00000439487 FTSJ3Q8IY81 847 aaKnown RBP24.48■■□□□ 1.51
SEMA3B-206ENST00000439487 ANKRD44Q8N8A2 993 aa24.48■■□□□ 1.51
SEMA3B-206ENST00000439487 MEIS3Q99687 375 aa24.48■■□□□ 1.51
SEMA3B-206ENST00000439487 RLBP1P12271 317 aa24.47■■□□□ 1.51
SEMA3B-206ENST00000439487 IGHMBP2P38935 993 aaKnown RBP24.47■■□□□ 1.51
SEMA3B-206ENST00000439487 GPSM2P81274 684 aa24.47■■□□□ 1.51
SEMA3B-206ENST00000439487 NSFL1CQ9UNZ2 370 aaKnown RBP24.47■■□□□ 1.51
SEMA3B-206ENST00000439487 LTBP1Q14766 1721 aa24.47■■□□□ 1.51
SEMA3B-206ENST00000439487 PLIN1O60240 522 aa24.46■■□□□ 1.51
SEMA3B-206ENST00000439487 IARSP41252 1262 aaKnown RBP24.46■■□□□ 1.51
SEMA3B-206ENST00000439487 BSDC1Q9NW68 430 aaPredicted RBP24.46■■□□□ 1.51
SEMA3B-206ENST00000439487 DUOX1Q9NRD9 1551 aa24.46■■□□□ 1.51
SEMA3B-206ENST00000439487 CCDC57Q2TAC2 916 aa24.45■■□□□ 1.5
SEMA3B-206ENST00000439487 RABL6Q3YEC7 729 aaPredicted RBP24.45■■□□□ 1.5
SEMA3B-206ENST00000439487 RTFDC1Q9BY42 306 aaPredicted RBP24.45■■□□□ 1.5
SEMA3B-206ENST00000439487 ZNF594Q96JF6 807 aaPredicted RBP24.44■■□□□ 1.5
SEMA3B-206ENST00000439487 MPHOSPH8Q99549 860 aa24.44■■□□□ 1.5
SEMA3B-206ENST00000439487 A0A1B0GUL6 1792 aa24.44■■□□□ 1.5
SEMA3B-206ENST00000439487 GNAI3P08754 354 aa24.43■■□□□ 1.5
SEMA3B-206ENST00000439487 SUPT20HQ8NEM7 779 aa24.43■■□□□ 1.5
SEMA3B-206ENST00000439487 PANK1Q8TE04 598 aa24.43■■□□□ 1.5
SEMA3B-206ENST00000439487 MINPP1Q9UNW1 487 aa24.43■■□□□ 1.5
SEMA3B-206ENST00000439487 LRRFIP2Q9Y608 721 aaKnown RBP24.43■■□□□ 1.5
SEMA3B-206ENST00000439487 CEP350Q5VT06 3117 aa24.42■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms