RNA–Protein interactions for RNA: ENST00000438745.1

HMGB3P12-201, Transcript of high mobility group box 3 pseudogene 12, humanhuman

BASIC

Gene HMGB3P12, Length 556 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P12-201ENST00000438745 SEPT3Q9UH03 358 aa6.61□□□□□ -1.35
HMGB3P12-201ENST00000438745 USP20Q9Y2K6 914 aa6.61□□□□□ -1.35
HMGB3P12-201ENST00000438745 M0R082 166 aa6.6□□□□□ -1.35
HMGB3P12-201ENST00000438745 SUPT5HO00267 1087 aaKnown RBP6.6□□□□□ -1.35
HMGB3P12-201ENST00000438745 MSTNO14793 375 aa6.6□□□□□ -1.35
HMGB3P12-201ENST00000438745 ZBTB39O15060 712 aa6.6□□□□□ -1.35
HMGB3P12-201ENST00000438745 SASH3O75995 380 aa6.6□□□□□ -1.35
HMGB3P12-201ENST00000438745 ZNF417Q8TAU3 575 aa6.6□□□□□ -1.35
HMGB3P12-201ENST00000438745 PNMA5Q96PV4 448 aa6.6□□□□□ -1.35
HMGB3P12-201ENST00000438745 ZNF587Q96SQ5 575 aaPredicted RBP6.6□□□□□ -1.35
HMGB3P12-201ENST00000438745 DNAJB12Q9NXW2 375 aaKnown RBP6.6□□□□□ -1.35
HMGB3P12-201ENST00000438745 SLC6A14Q9UN76 642 aa6.6□□□□□ -1.35
HMGB3P12-201ENST00000438745 XYLBO75191 536 aa6.59□□□□□ -1.35
HMGB3P12-201ENST00000438745 NID1P14543 1247 aa6.59□□□□□ -1.35
HMGB3P12-201ENST00000438745 SCNN1AP37088 669 aa6.59□□□□□ -1.35
HMGB3P12-201ENST00000438745 PCSK7Q16549 785 aa6.59□□□□□ -1.35
HMGB3P12-201ENST00000438745 RGL4Q8IZJ4 473 aa6.59□□□□□ -1.35
HMGB3P12-201ENST00000438745 CMTR1Q8N1G2 835 aaKnown RBP6.59□□□□□ -1.35
HMGB3P12-201ENST00000438745 PLVAPQ9BX97 442 aa6.59□□□□□ -1.35
HMGB3P12-201ENST00000438745 UBE2OQ9C0C9 1292 aaKnown RBP6.59□□□□□ -1.35
HMGB3P12-201ENST00000438745 NOP53Q9NZM5 478 aaKnown RBP6.59□□□□□ -1.35
HMGB3P12-201ENST00000438745 CARNS1A5YM72 827 aa6.58□□□□□ -1.36
HMGB3P12-201ENST00000438745 HOXD8P13378 290 aaPredicted RBP6.58□□□□□ -1.36
HMGB3P12-201ENST00000438745 NPR3P17342 541 aa6.58□□□□□ -1.36
HMGB3P12-201ENST00000438745 C8orf86Q6ZUL3 223 aa6.58□□□□□ -1.36
HMGB3P12-201ENST00000438745 DHX32Q7L7V1 743 aaKnown RBP6.58□□□□□ -1.36
HMGB3P12-201ENST00000438745 HELQQ8TDG4 1101 aa6.58□□□□□ -1.36
HMGB3P12-201ENST00000438745 TTC9Q92623 222 aa6.58□□□□□ -1.36
HMGB3P12-201ENST00000438745 FAM13BQ9NYF5 915 aa6.58□□□□□ -1.36
HMGB3P12-201ENST00000438745 TLR7Q9NYK1 1049 aaKnown RBP6.58□□□□□ -1.36
HMGB3P12-201ENST00000438745 USTQ9Y2C2 406 aa6.58□□□□□ -1.36
HMGB3P12-201ENST00000438745 ADAM23O75077 832 aa6.57□□□□□ -1.36
HMGB3P12-201ENST00000438745 RARAP10276 462 aa6.57□□□□□ -1.36
HMGB3P12-201ENST00000438745 ZAP70P43403 619 aa6.57□□□□□ -1.36
HMGB3P12-201ENST00000438745 NRLP54845 237 aa6.57□□□□□ -1.36
HMGB3P12-201ENST00000438745 GPLD1P80108 840 aa6.57□□□□□ -1.36
HMGB3P12-201ENST00000438745 TRIP4Q15650 581 aaPredicted RBP6.57□□□□□ -1.36
HMGB3P12-201ENST00000438745 KRT25Q7Z3Z0 450 aa6.57□□□□□ -1.36
HMGB3P12-201ENST00000438745 ABTB2Q8N961 1025 aa6.57□□□□□ -1.36
HMGB3P12-201ENST00000438745 PIK3R5Q8WYR1 880 aa6.57□□□□□ -1.36
HMGB3P12-201ENST00000438745 IGFLR1Q9H665 355 aa6.57□□□□□ -1.36
HMGB3P12-201ENST00000438745 FRRS1LQ9P0K9 344 aa6.57□□□□□ -1.36
HMGB3P12-201ENST00000438745 NAGPAQ9UK23 515 aa6.57□□□□□ -1.36
HMGB3P12-201ENST00000438745 MMP20O60882 483 aa6.56□□□□□ -1.36
HMGB3P12-201ENST00000438745 LILRB5O75023 590 aa6.56□□□□□ -1.36
HMGB3P12-201ENST00000438745 SOX18P35713 384 aa6.56□□□□□ -1.36
HMGB3P12-201ENST00000438745 GRIK5Q16478 980 aa6.56□□□□□ -1.36
HMGB3P12-201ENST00000438745 NLRP13Q86W25 1043 aa6.56□□□□□ -1.36
HMGB3P12-201ENST00000438745 AFF1P51825 1210 aaKnown RBP6.55□□□□□ -1.36
HMGB3P12-201ENST00000438745 PSAPL1Q6NUJ1 521 aa6.55□□□□□ -1.36
HMGB3P12-201ENST00000438745 GTF3C2Q8WUA4 911 aaPredicted RBP6.55□□□□□ -1.36
HMGB3P12-201ENST00000438745 LPIN3Q9BQK8 851 aa6.55□□□□□ -1.36
HMGB3P12-201ENST00000438745 SPDYE3A6NKU9 549 aa6.54□□□□□ -1.36
HMGB3P12-201ENST00000438745 PLAURQ03405 335 aa6.54□□□□□ -1.36
HMGB3P12-201ENST00000438745 PERM1Q5SV97 790 aa6.54□□□□□ -1.36
HMGB3P12-201ENST00000438745 XKR5Q6UX68 686 aa6.54□□□□□ -1.36
HMGB3P12-201ENST00000438745 FAM35AQ86V20 835 aa6.54□□□□□ -1.36
HMGB3P12-201ENST00000438745 GPR152Q8TDT2 470 aa6.54□□□□□ -1.36
HMGB3P12-201ENST00000438745 FNDC3AQ9Y2H6 1198 aaKnown RBP6.54□□□□□ -1.36
HMGB3P12-201ENST00000438745 LOC102724428A0A0B4J2F2 783 aa6.53□□□□□ -1.36
HMGB3P12-201ENST00000438745 UBAP1LF5GYI3 381 aa6.53□□□□□ -1.36
HMGB3P12-201ENST00000438745 RGS9O75916 674 aaPredicted RBP6.53□□□□□ -1.36
HMGB3P12-201ENST00000438745 SPATA31C1P0DKV0 1188 aa6.53□□□□□ -1.36
HMGB3P12-201ENST00000438745 ARID4AP29374 1257 aaPredicted RBP6.53□□□□□ -1.36
HMGB3P12-201ENST00000438745 SIK1P57059 783 aa6.53□□□□□ -1.36
HMGB3P12-201ENST00000438745 TBC1D8BQ0IIM8 1120 aa6.53□□□□□ -1.36
HMGB3P12-201ENST00000438745 NOM1Q5C9Z4 860 aaKnown RBP6.53□□□□□ -1.36
HMGB3P12-201ENST00000438745 CD163Q86VB7 1156 aa6.53□□□□□ -1.36
HMGB3P12-201ENST00000438745 OR13H1Q8NG92 308 aa6.53□□□□□ -1.36
HMGB3P12-201ENST00000438745 NUDT8Q8WV74 236 aa6.53□□□□□ -1.36
HMGB3P12-201ENST00000438745 C1QTNF9BB2RNN3 333 aa6.52□□□□□ -1.37
HMGB3P12-201ENST00000438745 PSAPP07602 524 aa6.52□□□□□ -1.37
HMGB3P12-201ENST00000438745 FURINP09958 794 aa6.52□□□□□ -1.37
HMGB3P12-201ENST00000438745 CPB1P15086 417 aa6.52□□□□□ -1.37
HMGB3P12-201ENST00000438745 FKBP4Q02790 459 aaKnown RBP eCLIP6.52□□□□□ -1.37
HMGB3P12-201ENST00000438745 XP32Q5T750 250 aa6.52□□□□□ -1.37
HMGB3P12-201ENST00000438745 PDE12Q6L8Q7 609 aaKnown RBP6.52□□□□□ -1.37
HMGB3P12-201ENST00000438745 ATCAYQ86WG3 371 aa6.52□□□□□ -1.37
HMGB3P12-201ENST00000438745 ARID3AQ99856 593 aa6.52□□□□□ -1.37
HMGB3P12-201ENST00000438745 JPH1Q9HDC5 661 aaPredicted RBP6.52□□□□□ -1.37
HMGB3P12-201ENST00000438745 RPLP1P05386 114 aaKnown RBP6.51□□□□□ -1.37
HMGB3P12-201ENST00000438745 MPSTP25325 297 aa6.51□□□□□ -1.37
HMGB3P12-201ENST00000438745 CHRNA4P43681 627 aa6.51□□□□□ -1.37
HMGB3P12-201ENST00000438745 BAG6P46379 1132 aa6.51□□□□□ -1.37
HMGB3P12-201ENST00000438745 EIF1AXP47813 144 aaKnown RBP6.51□□□□□ -1.37
HMGB3P12-201ENST00000438745 TRIM28Q13263 835 aaKnown RBP6.51□□□□□ -1.37
HMGB3P12-201ENST00000438745 SF3B2Q13435 895 aaKnown RBP6.51□□□□□ -1.37
HMGB3P12-201ENST00000438745 ECM1Q16610 540 aa6.51□□□□□ -1.37
HMGB3P12-201ENST00000438745 ALKBH2Q6NS38 261 aa6.51□□□□□ -1.37
HMGB3P12-201ENST00000438745 NUDT16Q96DE0 195 aaKnown RBP6.51□□□□□ -1.37
HMGB3P12-201ENST00000438745 MTMR7Q9Y216 660 aa6.51□□□□□ -1.37
HMGB3P12-201ENST00000438745 A0A0A0MRY4 1105 aa6.5□□□□□ -1.37
HMGB3P12-201ENST00000438745 J3QW42 95 aa6.5□□□□□ -1.37
HMGB3P12-201ENST00000438745 MZF1P28698 734 aaPredicted RBP6.5□□□□□ -1.37
HMGB3P12-201ENST00000438745 MLLT1Q03111 559 aaPredicted RBP6.5□□□□□ -1.37
HMGB3P12-201ENST00000438745 MTMR3Q13615 1198 aa6.5□□□□□ -1.37
HMGB3P12-201ENST00000438745 PRRT3Q5FWE3 981 aa6.5□□□□□ -1.37
HMGB3P12-201ENST00000438745 TRAPPC3LQ5T215 181 aa6.5□□□□□ -1.37
HMGB3P12-201ENST00000438745 MSL1Q68DK7 614 aa6.5□□□□□ -1.37
HMGB3P12-201ENST00000438745 ELMSAN1Q6PJG2 1045 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms