RNA–Protein interactions for RNA: ENST00000438362.6

CSDE1-205, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-205ENST00000438362 CUL4AQ13619 759 aa7.78□□□□□ -1.16
CSDE1-205ENST00000438362 FAM173BQ6P4H8 233 aa7.78□□□□□ -1.16
CSDE1-205ENST00000438362 TMCO3Q6UWJ1 677 aa7.78□□□□□ -1.16
CSDE1-205ENST00000438362 AIDAQ96BJ3 306 aa7.78□□□□□ -1.16
CSDE1-205ENST00000438362 CCDC94Q9BW85 323 aaPredicted RBP7.78□□□□□ -1.16
CSDE1-205ENST00000438362 TM6SF1Q9BZW5 370 aa7.78□□□□□ -1.16
CSDE1-205ENST00000438362 STRN4Q9NRL3 753 aa7.78□□□□□ -1.16
CSDE1-205ENST00000438362 RNF17Q9BXT8 1623 aaKnown RBP7.78□□□□□ -1.16
CSDE1-205ENST00000438362 ABCA6Q8N139 1617 aa7.78□□□□□ -1.16
CSDE1-205ENST00000438362 URI1O94763 535 aaPredicted RBP7.78□□□□□ -1.16
CSDE1-205ENST00000438362 HAND2P61296 217 aa7.78□□□□□ -1.16
CSDE1-205ENST00000438362 MYRIPQ8NFW9 859 aa7.78□□□□□ -1.16
CSDE1-205ENST00000438362 IP6K1Q92551 441 aa7.78□□□□□ -1.16
CSDE1-205ENST00000438362 NOL10Q9BSC4 688 aaKnown RBP7.78□□□□□ -1.16
CSDE1-205ENST00000438362 SNRKQ9NRH2 765 aa7.78□□□□□ -1.16
CSDE1-205ENST00000438362 TBX22Q9Y458 520 aa7.78□□□□□ -1.16
CSDE1-205ENST00000438362 SLC27A2O14975 620 aa7.77□□□□□ -1.17
CSDE1-205ENST00000438362 TXLNAP40222 546 aa7.77□□□□□ -1.17
CSDE1-205ENST00000438362 TDO2P48775 406 aa7.77□□□□□ -1.17
CSDE1-205ENST00000438362 SNW1Q13573 536 aaKnown RBP7.77□□□□□ -1.17
CSDE1-205ENST00000438362 MRPS27Q92552 414 aaKnown RBP7.77□□□□□ -1.17
CSDE1-205ENST00000438362 ERCC4Q92889 916 aaPredicted RBP7.77□□□□□ -1.17
CSDE1-205ENST00000438362 BICC1Q9H694 974 aaKnown RBP7.77□□□□□ -1.17
CSDE1-205ENST00000438362 DDX21Q9NR30 783 aaKnown RBP eCLIP7.77□□□□□ -1.17
CSDE1-205ENST00000438362 CWC25Q9NXE8 425 aaPredicted RBP7.77□□□□□ -1.17
CSDE1-205ENST00000438362 RGS12O14924 1447 aa7.77□□□□□ -1.17
CSDE1-205ENST00000438362 RPS6KB1P23443 525 aa7.77□□□□□ -1.17
CSDE1-205ENST00000438362 IFIT5Q13325 482 aaKnown RBP7.77□□□□□ -1.17
CSDE1-205ENST00000438362 LMBR1LQ6UX01 489 aa7.77□□□□□ -1.17
CSDE1-205ENST00000438362 FAM227BQ96M60 508 aa7.77□□□□□ -1.17
CSDE1-205ENST00000438362 MPHOSPH8Q99549 860 aa7.77□□□□□ -1.17
CSDE1-205ENST00000438362 ZBTB3Q9H5J0 574 aa7.77□□□□□ -1.17
CSDE1-205ENST00000438362 CWC15Q9P013 229 aaKnown RBP7.77□□□□□ -1.17
CSDE1-205ENST00000438362 DTNBO60941 627 aa7.77□□□□□ -1.17
CSDE1-205ENST00000438362 C17orf53Q8N3J3 647 aaPredicted RBP7.77□□□□□ -1.17
CSDE1-205ENST00000438362 CCDC150Q8NCX0 1101 aa7.77□□□□□ -1.17
CSDE1-205ENST00000438362 IL17REQ8NFR9 667 aa7.77□□□□□ -1.17
CSDE1-205ENST00000438362 KCNG4Q8TDN1 519 aa7.77□□□□□ -1.17
CSDE1-205ENST00000438362 UBAC1Q9BSL1 405 aa7.77□□□□□ -1.17
CSDE1-205ENST00000438362 ZHX1Q9UKY1 873 aaPredicted RBP7.77□□□□□ -1.17
CSDE1-205ENST00000438362 YEATS2Q9ULM3 1422 aa7.77□□□□□ -1.17
CSDE1-205ENST00000438362 RNMTO43148 476 aaKnown RBP7.76□□□□□ -1.17
CSDE1-205ENST00000438362 DHX32Q7L7V1 743 aaKnown RBP7.76□□□□□ -1.17
CSDE1-205ENST00000438362 KRT28Q7Z3Y7 464 aa7.76□□□□□ -1.17
CSDE1-205ENST00000438362 UNC5CLQ8IV45 518 aa7.76□□□□□ -1.17
CSDE1-205ENST00000438362 CNNM3Q8NE01 707 aa7.76□□□□□ -1.17
CSDE1-205ENST00000438362 KIF2CQ99661 725 aa7.76□□□□□ -1.17
CSDE1-205ENST00000438362 LGR6Q9HBX8 967 aa7.76□□□□□ -1.17
CSDE1-205ENST00000438362 CDK12Q9NYV4 1490 aaPredicted RBP7.76□□□□□ -1.17
CSDE1-205ENST00000438362 CHD1O14646 1710 aa7.76□□□□□ -1.17
CSDE1-205ENST00000438362 KLF18A0A0U1RQI7 1052 aa7.76□□□□□ -1.17
CSDE1-205ENST00000438362 AOPEPQ8N6M6 819 aa7.76□□□□□ -1.17
CSDE1-205ENST00000438362 NCOA7Q8NI08 942 aa7.76□□□□□ -1.17
CSDE1-205ENST00000438362 PNPLA6Q8IY17 1366 aa7.76□□□□□ -1.17
CSDE1-205ENST00000438362 ERLIN1O75477 346 aa7.76□□□□□ -1.17
CSDE1-205ENST00000438362 EIF4A1P60842 406 aaKnown RBP7.76□□□□□ -1.17
CSDE1-205ENST00000438362 CLEC17AQ6ZS10 378 aa7.76□□□□□ -1.17
CSDE1-205ENST00000438362 NAPBQ9H115 298 aa7.76□□□□□ -1.17
CSDE1-205ENST00000438362 CEP131Q9UPN4 1083 aa7.76□□□□□ -1.17
CSDE1-205ENST00000438362 ABCC3O15438 1527 aa7.76□□□□□ -1.17
CSDE1-205ENST00000438362 ERBB4Q15303 1308 aa7.76□□□□□ -1.17
CSDE1-205ENST00000438362 PTPDC1A2A3K4 754 aa7.75□□□□□ -1.17
CSDE1-205ENST00000438362 RAB11FIP4Q86YS3 637 aa7.75□□□□□ -1.17
CSDE1-205ENST00000438362 CAGE1Q8TC20 777 aa7.75□□□□□ -1.17
CSDE1-205ENST00000438362 AK7Q96M32 723 aa7.75□□□□□ -1.17
CSDE1-205ENST00000438362 RNF39Q9H2S5 420 aa7.75□□□□□ -1.17
CSDE1-205ENST00000438362 SETBP1Q9Y6X0 1596 aa7.75□□□□□ -1.17
CSDE1-205ENST00000438362 CPSF1Q10570 1443 aaKnown RBP7.75□□□□□ -1.17
CSDE1-205ENST00000438362 ZFYP08048 801 aaPredicted RBP7.75□□□□□ -1.17
CSDE1-205ENST00000438362 KCNA6P17658 529 aa7.75□□□□□ -1.17
CSDE1-205ENST00000438362 IL15P40933 162 aaPredicted RBP7.75□□□□□ -1.17
CSDE1-205ENST00000438362 ISM2Q6H9L7 571 aa7.75□□□□□ -1.17
CSDE1-205ENST00000438362 GNL3LQ9NVN8 582 aaKnown RBP7.75□□□□□ -1.17
CSDE1-205ENST00000438362 MTMR6Q9Y217 621 aa7.75□□□□□ -1.17
CSDE1-205ENST00000438362 METP08581 1390 aa7.75□□□□□ -1.17
CSDE1-205ENST00000438362 CCDC196A0A1B0GTZ2 297 aa7.75□□□□□ -1.17
CSDE1-205ENST00000438362 ERICH4A6NGS2 130 aa7.75□□□□□ -1.17
CSDE1-205ENST00000438362 GOLGA8AA7E2F4 631 aa7.75□□□□□ -1.17
CSDE1-205ENST00000438362 STARD3NLO95772 234 aa7.75□□□□□ -1.17
CSDE1-205ENST00000438362 IARSP41252 1262 aaKnown RBP7.75□□□□□ -1.17
CSDE1-205ENST00000438362 APOBRQ0VD83 1088 aa7.75□□□□□ -1.17
CSDE1-205ENST00000438362 TFCP2Q12800 502 aa7.75□□□□□ -1.17
CSDE1-205ENST00000438362 ME3Q16798 604 aa7.75□□□□□ -1.17
CSDE1-205ENST00000438362 TAF3Q5VWG9 929 aa7.75□□□□□ -1.17
CSDE1-205ENST00000438362 CDC37L1Q7L3B6 337 aa7.75□□□□□ -1.17
CSDE1-205ENST00000438362 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.75□□□□□ -1.17
CSDE1-205ENST00000438362 LEO1Q8WVC0 666 aaPredicted RBP7.75□□□□□ -1.17
CSDE1-205ENST00000438362 CLSTN2Q9H4D0 955 aa7.75□□□□□ -1.17
CSDE1-205ENST00000438362 PAG1Q9NWQ8 432 aa7.75□□□□□ -1.17
CSDE1-205ENST00000438362 MAGEC2Q9UBF1 373 aaPredicted RBP7.75□□□□□ -1.17
CSDE1-205ENST00000438362 SYKP43405 635 aa7.74□□□□□ -1.17
CSDE1-205ENST00000438362 ARHGAP29Q52LW3 1261 aa7.74□□□□□ -1.17
CSDE1-205ENST00000438362 CCDC102BQ68D86 513 aa7.74□□□□□ -1.17
CSDE1-205ENST00000438362 RASEFQ8IZ41 740 aa7.74□□□□□ -1.17
CSDE1-205ENST00000438362 CBX8Q9HC52 389 aa7.74□□□□□ -1.17
CSDE1-205ENST00000438362 SLC12A7Q9Y666 1083 aa7.74□□□□□ -1.17
CSDE1-205ENST00000438362 GLI2P10070 1586 aa7.74□□□□□ -1.17
CSDE1-205ENST00000438362 CFAP74Q9C0B2 1584 aa7.74□□□□□ -1.17
CSDE1-205ENST00000438362 IFIT3O14879 490 aaKnown RBP7.74□□□□□ -1.17
CSDE1-205ENST00000438362 EIF3JO75822 258 aaKnown RBP7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms