RNA–Protein interactions for RNA: ENST00000437600.8

CUX1-206, Transcript of cut like homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CUX1, Length 3,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-206ENST00000437600 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.43□□□□□ -0.58
CUX1-206ENST00000437600 KCPQ6ZWJ8 1503 aa11.43□□□□□ -0.58
CUX1-206ENST00000437600 LARGE1O95461 756 aa11.43□□□□□ -0.58
CUX1-206ENST00000437600 CDCA7Q9BWT1 371 aaPredicted RBP11.43□□□□□ -0.58
CUX1-206ENST00000437600 ATRNO75882 1429 aa11.43□□□□□ -0.58
CUX1-206ENST00000437600 HSPA4P34932 840 aa11.43□□□□□ -0.58
CUX1-206ENST00000437600 KCNJ4P48050 445 aa11.43□□□□□ -0.58
CUX1-206ENST00000437600 AK2P54819 239 aa11.43□□□□□ -0.58
CUX1-206ENST00000437600 RNF214Q8ND24 703 aa11.43□□□□□ -0.58
CUX1-206ENST00000437600 LSG1Q9H089 658 aaKnown RBP11.43□□□□□ -0.58
CUX1-206ENST00000437600 ECHDC1Q9NTX5 307 aa11.43□□□□□ -0.58
CUX1-206ENST00000437600 TAF7LQ5H9L4 462 aa11.42□□□□□ -0.58
CUX1-206ENST00000437600 MPNDQ8N594 471 aa11.42□□□□□ -0.58
CUX1-206ENST00000437600 FBXO41Q8TF61 875 aa11.42□□□□□ -0.58
CUX1-206ENST00000437600 PPFIA3O75145 1194 aa11.42□□□□□ -0.58
CUX1-206ENST00000437600 GADD45BO75293 160 aaPredicted RBP11.42□□□□□ -0.58
CUX1-206ENST00000437600 NECAB1Q8N987 351 aa11.42□□□□□ -0.58
CUX1-206ENST00000437600 CWC22Q9HCG8 908 aaKnown RBP11.42□□□□□ -0.58
CUX1-206ENST00000437600 RGS17Q9UGC6 210 aaPredicted RBP11.42□□□□□ -0.58
CUX1-206ENST00000437600 UBR2Q8IWV8 1755 aa11.42□□□□□ -0.58
CUX1-206ENST00000437600 SYCE3A1L190 88 aa11.41□□□□□ -0.58
CUX1-206ENST00000437600 GPTP24298 496 aa11.41□□□□□ -0.58
CUX1-206ENST00000437600 KLHL40Q2TBA0 621 aa11.41□□□□□ -0.58
CUX1-206ENST00000437600 SKOR2Q2VWA4 1001 aaPredicted RBP11.41□□□□□ -0.58
CUX1-206ENST00000437600 ZSCAN23Q3MJ62 389 aa11.41□□□□□ -0.58
CUX1-206ENST00000437600 SYNE4Q8N205 404 aa11.41□□□□□ -0.58
CUX1-206ENST00000437600 PLBD2Q8NHP8 589 aa11.41□□□□□ -0.58
CUX1-206ENST00000437600 GLRX3O76003 335 aaKnown RBP11.41□□□□□ -0.58
CUX1-206ENST00000437600 LMBR1LQ6UX01 489 aa11.41□□□□□ -0.58
CUX1-206ENST00000437600 JAKMIP1Q96N16 626 aaKnown RBP11.41□□□□□ -0.58
CUX1-206ENST00000437600 TMEM63CQ9P1W3 806 aa11.41□□□□□ -0.58
CUX1-206ENST00000437600 RUFY3Q7L099 469 aa11.41□□□□□ -0.58
CUX1-206ENST00000437600 SEC62Q99442 399 aaKnown RBP11.41□□□□□ -0.58
CUX1-206ENST00000437600 THSD7AQ9UPZ6 1657 aa11.4□□□□□ -0.58
CUX1-206ENST00000437600 NMIQ13287 307 aaPredicted RBP11.4□□□□□ -0.58
CUX1-206ENST00000437600 MTX1Q13505 466 aa11.4□□□□□ -0.58
CUX1-206ENST00000437600 POTEAQ6S8J7 498 aa11.4□□□□□ -0.58
CUX1-206ENST00000437600 CCDC83Q8IWF9 413 aa11.4□□□□□ -0.58
CUX1-206ENST00000437600 ERBB4Q15303 1308 aa11.4□□□□□ -0.58
CUX1-206ENST00000437600 PAPPAQ13219 1627 aa11.4□□□□□ -0.58
CUX1-206ENST00000437600 TFCP2Q12800 502 aa11.4□□□□□ -0.58
CUX1-206ENST00000437600 HSP90AB4PQ58FF6 505 aa11.4□□□□□ -0.58
CUX1-206ENST00000437600 ZNF594Q96JF6 807 aaPredicted RBP11.4□□□□□ -0.58
CUX1-206ENST00000437600 DNAJC2Q99543 621 aaKnown RBP11.4□□□□□ -0.58
CUX1-206ENST00000437600 RBSNQ9H1K0 784 aa11.4□□□□□ -0.58
CUX1-206ENST00000437600 A0A0D9SFI3 127 aa11.39□□□□□ -0.59
CUX1-206ENST00000437600 ATP6V1AP38606 617 aa11.39□□□□□ -0.59
CUX1-206ENST00000437600 FSD1Q9BTV5 496 aa11.39□□□□□ -0.59
CUX1-206ENST00000437600 FAM177BA6PVY3 158 aa11.39□□□□□ -0.59
CUX1-206ENST00000437600 TRIM37O94972 964 aa11.39□□□□□ -0.59
CUX1-206ENST00000437600 NASPP49321 788 aaPredicted RBP11.39□□□□□ -0.59
CUX1-206ENST00000437600 TIMM10P62072 90 aa11.39□□□□□ -0.59
CUX1-206ENST00000437600 STK3Q13188 491 aa11.39□□□□□ -0.59
CUX1-206ENST00000437600 CCDC129Q6ZRS4 1044 aa11.39□□□□□ -0.59
CUX1-206ENST00000437600 FAM89AQ96GI7 184 aa11.39□□□□□ -0.59
CUX1-206ENST00000437600 NEUROD6Q96NK8 337 aa11.39□□□□□ -0.59
CUX1-206ENST00000437600 NAP1L5Q96NT1 182 aaPredicted RBP11.39□□□□□ -0.59
CUX1-206ENST00000437600 TBC1D2BQ9UPU7 963 aa11.39□□□□□ -0.59
CUX1-206ENST00000437600 ZBTB1Q9Y2K1 713 aa11.39□□□□□ -0.59
CUX1-206ENST00000437600 PLEKHG2Q9H7P9 1386 aa11.39□□□□□ -0.59
CUX1-206ENST00000437600 RAD50Q92878 1312 aa11.38□□□□□ -0.59
CUX1-206ENST00000437600 MYH14Q7Z406 1995 aaKnown RBP11.38□□□□□ -0.59
CUX1-206ENST00000437600 FAM173BQ6P4H8 233 aa11.38□□□□□ -0.59
CUX1-206ENST00000437600 ZNF589Q86UQ0 364 aaPredicted RBP11.38□□□□□ -0.59
CUX1-206ENST00000437600 UTYO14607 1347 aa11.38□□□□□ -0.59
CUX1-206ENST00000437600 BRD1O95696 1058 aa11.38□□□□□ -0.59
CUX1-206ENST00000437600 ITPK1Q13572 414 aa11.38□□□□□ -0.59
CUX1-206ENST00000437600 HLFQ16534 295 aa11.38□□□□□ -0.59
CUX1-206ENST00000437600 PALLDQ8WX93 1383 aa11.38□□□□□ -0.59
CUX1-206ENST00000437600 LOC102724428A0A0B4J2F2 783 aa11.38□□□□□ -0.59
CUX1-206ENST00000437600 SIK1P57059 783 aa11.38□□□□□ -0.59
CUX1-206ENST00000437600 PTPN12Q05209 780 aaKnown RBP11.38□□□□□ -0.59
CUX1-206ENST00000437600 CUL4AQ13619 759 aa11.38□□□□□ -0.59
CUX1-206ENST00000437600 CWC25Q9NXE8 425 aaPredicted RBP11.38□□□□□ -0.59
CUX1-206ENST00000437600 BTAF1O14981 1849 aa11.38□□□□□ -0.59
CUX1-206ENST00000437600 SBF2Q86WG5 1849 aa11.37□□□□□ -0.59
CUX1-206ENST00000437600 CLEC17AQ6ZS10 378 aa11.37□□□□□ -0.59
CUX1-206ENST00000437600 DDX46Q7L014 1031 aaKnown RBP11.37□□□□□ -0.59
CUX1-206ENST00000437600 USP48Q86UV5 1035 aa11.37□□□□□ -0.59
CUX1-206ENST00000437600 FERMT3Q86UX7 667 aa11.37□□□□□ -0.59
CUX1-206ENST00000437600 TRIM44Q96DX7 344 aaPredicted RBP11.37□□□□□ -0.59
CUX1-206ENST00000437600 DBNDD2Q9BQY9 259 aa11.37□□□□□ -0.59
CUX1-206ENST00000437600 CNPY2Q9Y2B0 182 aa11.37□□□□□ -0.59
CUX1-206ENST00000437600 RBM8AQ9Y5S9 174 aaKnown RBP11.37□□□□□ -0.59
CUX1-206ENST00000437600 N4BP2Q86UW6 1770 aaPredicted RBP11.37□□□□□ -0.59
CUX1-206ENST00000437600 ANAPC15P60006 121 aa11.37□□□□□ -0.59
CUX1-206ENST00000437600 KRT27Q7Z3Y8 459 aa11.37□□□□□ -0.59
CUX1-206ENST00000437600 LRRC2Q9BYS8 371 aa11.37□□□□□ -0.59
CUX1-206ENST00000437600 DBNLQ9UJU6 430 aaKnown RBP11.37□□□□□ -0.59
CUX1-206ENST00000437600 LAMB4A4D0S4 1761 aa11.36□□□□□ -0.59
CUX1-206ENST00000437600 ONECUT3O60422 494 aaPredicted RBP11.36□□□□□ -0.59
CUX1-206ENST00000437600 STARD3NLO95772 234 aa11.36□□□□□ -0.59
CUX1-206ENST00000437600 SYT1P21579 422 aa11.36□□□□□ -0.59
CUX1-206ENST00000437600 CASP7P55210 303 aa11.36□□□□□ -0.59
CUX1-206ENST00000437600 ZNF772Q68DY9 489 aaPredicted RBP11.36□□□□□ -0.59
CUX1-206ENST00000437600 TTC14Q96N46 770 aa11.36□□□□□ -0.59
CUX1-206ENST00000437600 PDRG1Q9NUG6 133 aa11.36□□□□□ -0.59
CUX1-206ENST00000437600 HDAC5Q9UQL6 1122 aa11.36□□□□□ -0.59
CUX1-206ENST00000437600 CYP19A1P11511 503 aaPredicted RBP11.35□□□□□ -0.59
CUX1-206ENST00000437600 RBM6P78332 1123 aaKnown RBP11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms