RNA–Protein interactions for RNA: ENST00000436949.5

SEMA3A-204, Transcript of semaphorin 3A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SEMA3A, Length 2,550 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3A-204ENST00000436949 ONECUT3O60422 494 aaPredicted RBP7.97□□□□□ -1.13
SEMA3A-204ENST00000436949 U2AF2P26368 475 aaKnown RBP eCLIP7.97□□□□□ -1.13
SEMA3A-204ENST00000436949 FOSBP53539 338 aa7.97□□□□□ -1.13
SEMA3A-204ENST00000436949 TYRO3Q06418 890 aa7.97□□□□□ -1.13
SEMA3A-204ENST00000436949 ANO6Q4KMQ2 910 aa7.97□□□□□ -1.13
SEMA3A-204ENST00000436949 SMAP1Q8IYB5 467 aaPredicted RBP7.97□□□□□ -1.13
SEMA3A-204ENST00000436949 EAF2Q96CJ1 260 aaPredicted RBP7.97□□□□□ -1.13
SEMA3A-204ENST00000436949 NPHP3Q7Z494 1330 aa7.97□□□□□ -1.13
SEMA3A-204ENST00000436949 SLC27A2O14975 620 aa7.97□□□□□ -1.13
SEMA3A-204ENST00000436949 EPB41L2O43491 1005 aaKnown RBP7.97□□□□□ -1.13
SEMA3A-204ENST00000436949 CEBPZQ03701 1054 aaKnown RBP7.97□□□□□ -1.13
SEMA3A-204ENST00000436949 AIMP1Q12904 312 aaKnown RBP7.97□□□□□ -1.13
SEMA3A-204ENST00000436949 ZNF589Q86UQ0 364 aaPredicted RBP7.97□□□□□ -1.13
SEMA3A-204ENST00000436949 DRC7Q8IY82 874 aa7.97□□□□□ -1.13
SEMA3A-204ENST00000436949 C16orf45Q96MC5 204 aaPredicted RBP7.97□□□□□ -1.13
SEMA3A-204ENST00000436949 NUP62CLQ9H1M0 184 aa7.97□□□□□ -1.13
SEMA3A-204ENST00000436949 CBX8Q9HC52 389 aa7.97□□□□□ -1.13
SEMA3A-204ENST00000436949 BTBD11A6QL63 1104 aa7.96□□□□□ -1.13
SEMA3A-204ENST00000436949 JAK2O60674 1132 aa7.96□□□□□ -1.13
SEMA3A-204ENST00000436949 NR1I2O75469 434 aa7.96□□□□□ -1.13
SEMA3A-204ENST00000436949 SASH1O94885 1247 aa7.96□□□□□ -1.13
SEMA3A-204ENST00000436949 ZKSCAN1P17029 563 aaPredicted RBP7.96□□□□□ -1.13
SEMA3A-204ENST00000436949 KRT85P78386 507 aa7.96□□□□□ -1.13
SEMA3A-204ENST00000436949 MAP3K11Q16584 847 aa7.96□□□□□ -1.13
SEMA3A-204ENST00000436949 FAM200AQ8TCP9 573 aa7.96□□□□□ -1.13
SEMA3A-204ENST00000436949 RUFY2Q8WXA3 655 aa7.96□□□□□ -1.13
SEMA3A-204ENST00000436949 TNMDQ9H2S6 317 aa7.96□□□□□ -1.13
SEMA3A-204ENST00000436949 TTC41PQ6P2S7 1318 aa7.96□□□□□ -1.13
SEMA3A-204ENST00000436949 PDCL2Q8N4E4 241 aa7.96□□□□□ -1.14
SEMA3A-204ENST00000436949 KAZALD1Q96I82 304 aa7.96□□□□□ -1.14
SEMA3A-204ENST00000436949 SUCLG2Q96I99 432 aa7.96□□□□□ -1.14
SEMA3A-204ENST00000436949 SH2B1Q9NRF2 756 aaPredicted RBP7.96□□□□□ -1.14
SEMA3A-204ENST00000436949 PLCH1Q4KWH8 1693 aa7.95□□□□□ -1.14
SEMA3A-204ENST00000436949 USP42Q9H9J4 1324 aaKnown RBP7.95□□□□□ -1.14
SEMA3A-204ENST00000436949 GOLGA6L4A6NEF3 574 aa7.95□□□□□ -1.14
SEMA3A-204ENST00000436949 SF3B2Q13435 895 aaKnown RBP7.95□□□□□ -1.14
SEMA3A-204ENST00000436949 TOB2Q14106 344 aaPredicted RBP7.95□□□□□ -1.14
SEMA3A-204ENST00000436949 ARID5BQ14865 1188 aa7.95□□□□□ -1.14
SEMA3A-204ENST00000436949 HSP90AB4PQ58FF6 505 aa7.95□□□□□ -1.14
SEMA3A-204ENST00000436949 MAP4K1Q92918 833 aa7.95□□□□□ -1.14
SEMA3A-204ENST00000436949 EVI5LQ96CN4 794 aa7.95□□□□□ -1.14
SEMA3A-204ENST00000436949 PGBD1Q96JS3 809 aa7.95□□□□□ -1.14
SEMA3A-204ENST00000436949 SPATA32Q96LK8 384 aa7.95□□□□□ -1.14
SEMA3A-204ENST00000436949 ZSCAN31Q96LW9 406 aaPredicted RBP7.95□□□□□ -1.14
SEMA3A-204ENST00000436949 LRRC2Q9BYS8 371 aa7.95□□□□□ -1.14
SEMA3A-204ENST00000436949 TRIM5Q9C035 493 aa7.95□□□□□ -1.14
SEMA3A-204ENST00000436949 DNAJC25Q9H1X3 360 aa7.95□□□□□ -1.14
SEMA3A-204ENST00000436949 CCDC9Q9Y3X0 531 aaKnown RBP7.95□□□□□ -1.14
SEMA3A-204ENST00000436949 ABCA3Q99758 1704 aa7.95□□□□□ -1.14
SEMA3A-204ENST00000436949 TEFQ10587 303 aa7.95□□□□□ -1.14
SEMA3A-204ENST00000436949 LEO1Q8WVC0 666 aaPredicted RBP7.95□□□□□ -1.14
SEMA3A-204ENST00000436949 FSD1Q9BTV5 496 aa7.95□□□□□ -1.14
SEMA3A-204ENST00000436949 TM6SF1Q9BZW5 370 aa7.95□□□□□ -1.14
SEMA3A-204ENST00000436949 FTOQ9C0B1 505 aaKnown RBP eCLIP7.95□□□□□ -1.14
SEMA3A-204ENST00000436949 BICC1Q9H694 974 aaKnown RBP7.95□□□□□ -1.14
SEMA3A-204ENST00000436949 TOPAZ1Q8N9V7 1692 aa7.95□□□□□ -1.14
SEMA3A-204ENST00000436949 PXDNLA1KZ92 1463 aa7.94□□□□□ -1.14
SEMA3A-204ENST00000436949 CCDC144BQ3MJ40 725 aa7.94□□□□□ -1.14
SEMA3A-204ENST00000436949 BLOC1S2Q6QNY1 142 aa7.94□□□□□ -1.14
SEMA3A-204ENST00000436949 CCDC129Q6ZRS4 1044 aa7.94□□□□□ -1.14
SEMA3A-204ENST00000436949 CCDC144CPQ8IYA2 1237 aa7.94□□□□□ -1.14
SEMA3A-204ENST00000436949 BICD2Q8TD16 824 aa7.94□□□□□ -1.14
SEMA3A-204ENST00000436949 ERCC4Q92889 916 aaPredicted RBP7.94□□□□□ -1.14
SEMA3A-204ENST00000436949 KCNB2Q92953 911 aa7.94□□□□□ -1.14
SEMA3A-204ENST00000436949 FBXW7Q969H0 707 aa7.94□□□□□ -1.14
SEMA3A-204ENST00000436949 NRAPQ86VF7 1730 aa7.94□□□□□ -1.14
SEMA3A-204ENST00000436949 TNS1Q9HBL0 1735 aaKnown RBP7.94□□□□□ -1.14
SEMA3A-204ENST00000436949 FMN2Q9NZ56 1722 aa7.94□□□□□ -1.14
SEMA3A-204ENST00000436949 PIP4K2AP48426 406 aaPredicted RBP7.94□□□□□ -1.14
SEMA3A-204ENST00000436949 DMTNQ08495 405 aa7.94□□□□□ -1.14
SEMA3A-204ENST00000436949 CHAF1AQ13111 956 aaPredicted RBP7.94□□□□□ -1.14
SEMA3A-204ENST00000436949 VPS72Q15906 364 aa7.94□□□□□ -1.14
SEMA3A-204ENST00000436949 SLFNL1Q499Z3 407 aa7.94□□□□□ -1.14
SEMA3A-204ENST00000436949 ZNF530Q6P9A1 599 aaPredicted RBP7.94□□□□□ -1.14
SEMA3A-204ENST00000436949 SEC62Q99442 399 aaKnown RBP7.94□□□□□ -1.14
SEMA3A-204ENST00000436949 LRRC37A3O60309 1634 aa7.94□□□□□ -1.14
SEMA3A-204ENST00000436949 RGPD8O14715 1765 aaPredicted RBP7.93□□□□□ -1.14
SEMA3A-204ENST00000436949 CEMIPQ8WUJ3 1361 aa7.93□□□□□ -1.14
SEMA3A-204ENST00000436949 PIK3C2AO00443 1686 aa7.93□□□□□ -1.14
SEMA3A-204ENST00000436949 GOLGA6L6A8MZA4 724 aa7.93□□□□□ -1.14
SEMA3A-204ENST00000436949 ADAMTS2O95450 1211 aa7.93□□□□□ -1.14
SEMA3A-204ENST00000436949 RPS6KB1P23443 525 aa7.93□□□□□ -1.14
SEMA3A-204ENST00000436949 ZNF165P49910 485 aa7.93□□□□□ -1.14
SEMA3A-204ENST00000436949 ZNF75DP51815 510 aa7.93□□□□□ -1.14
SEMA3A-204ENST00000436949 ZSCAN25Q6NSZ9 544 aa7.93□□□□□ -1.14
SEMA3A-204ENST00000436949 CACTINQ8WUQ7 758 aaKnown RBP7.93□□□□□ -1.14
SEMA3A-204ENST00000436949 ZNF592Q92610 1267 aa7.93□□□□□ -1.14
SEMA3A-204ENST00000436949 GPATCH3Q96I76 525 aa7.93□□□□□ -1.14
SEMA3A-204ENST00000436949 RREB1Q92766 1687 aa7.93□□□□□ -1.14
SEMA3A-204ENST00000436949 USP27XA6NNY8 438 aa7.93□□□□□ -1.14
SEMA3A-204ENST00000436949 BAG6P46379 1132 aa7.93□□□□□ -1.14
SEMA3A-204ENST00000436949 NCBP1Q09161 790 aaKnown RBP7.93□□□□□ -1.14
SEMA3A-204ENST00000436949 G3BP1Q13283 466 aaKnown RBP eCLIP7.93□□□□□ -1.14
SEMA3A-204ENST00000436949 MTX1Q13505 466 aa7.93□□□□□ -1.14
SEMA3A-204ENST00000436949 EPHA10Q5JZY3 1008 aa7.93□□□□□ -1.14
SEMA3A-204ENST00000436949 DBF4Q9UBU7 674 aaPredicted RBP7.93□□□□□ -1.14
SEMA3A-204ENST00000436949 USP16Q9Y5T5 823 aa7.93□□□□□ -1.14
SEMA3A-204ENST00000436949 THSD7AQ9UPZ6 1657 aa7.93□□□□□ -1.14
SEMA3A-204ENST00000436949 COL15A1P39059 1388 aa7.92□□□□□ -1.14
SEMA3A-204ENST00000436949 TNNT1P13805 278 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms