RNA–Protein interactions for RNA: ENST00000436786.1

LINC01239-202, Transcript of long intergenic non-protein coding RNA 1239, humanhuman

TSL 2 BASIC

Gene LINC01239, Length 2,347 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01239-202ENST00000436786 DDNO94850 711 aaPredicted RBP5.88□□□□□ -1.47
LINC01239-202ENST00000436786 TAF7Q15545 349 aaPredicted RBP5.88□□□□□ -1.47
LINC01239-202ENST00000436786 C7orf43Q8WVR3 580 aa5.88□□□□□ -1.47
LINC01239-202ENST00000436786 NIP7Q9Y221 180 aaKnown RBP eCLIP5.88□□□□□ -1.47
LINC01239-202ENST00000436786 KLRG2A4D1S0 409 aaPredicted RBP5.88□□□□□ -1.47
LINC01239-202ENST00000436786 NPR1P16066 1061 aa5.88□□□□□ -1.47
LINC01239-202ENST00000436786 HLFQ16534 295 aa5.88□□□□□ -1.47
LINC01239-202ENST00000436786 SOGA3Q5TF21 947 aa5.88□□□□□ -1.47
LINC01239-202ENST00000436786 TPTE2Q6XPS3 522 aa5.88□□□□□ -1.47
LINC01239-202ENST00000436786 WNT2BQ93097 391 aa5.88□□□□□ -1.47
LINC01239-202ENST00000436786 ZNF652Q9Y2D9 606 aa5.88□□□□□ -1.47
LINC01239-202ENST00000436786 LOC100996750A0A140TA64 210 aa5.87□□□□□ -1.47
LINC01239-202ENST00000436786 PSEN2P49810 448 aa5.87□□□□□ -1.47
LINC01239-202ENST00000436786 OLFM4Q6UX06 510 aa5.87□□□□□ -1.47
LINC01239-202ENST00000436786 BCORQ6W2J9 1755 aa5.87□□□□□ -1.47
LINC01239-202ENST00000436786 SLX4Q8IY92 1834 aa5.87□□□□□ -1.47
LINC01239-202ENST00000436786 KRTAP4-6Q9BYQ5 205 aa5.87□□□□□ -1.47
LINC01239-202ENST00000436786 FER1L6Q2WGJ9 1857 aa5.87□□□□□ -1.47
LINC01239-202ENST00000436786 CCDC93Q567U6 631 aa5.87□□□□□ -1.47
LINC01239-202ENST00000436786 NGEFQ8N5V2 710 aa5.87□□□□□ -1.47
LINC01239-202ENST00000436786 ZNF277Q9NRM2 450 aaPredicted RBP5.87□□□□□ -1.47
LINC01239-202ENST00000436786 FBXO3Q9UK99 471 aa5.87□□□□□ -1.47
LINC01239-202ENST00000436786 CCDC88AQ3V6T2 1871 aa5.87□□□□□ -1.47
LINC01239-202ENST00000436786 RGL2O15211 777 aa5.86□□□□□ -1.47
LINC01239-202ENST00000436786 FKBP4Q02790 459 aaKnown RBP eCLIP5.86□□□□□ -1.47
LINC01239-202ENST00000436786 THUMPD2Q9BTF0 503 aaKnown RBP5.86□□□□□ -1.47
LINC01239-202ENST00000436786 VPS9D1Q9Y2B5 631 aa5.86□□□□□ -1.47
LINC01239-202ENST00000436786 ZNF541Q9H0D2 1346 aa5.86□□□□□ -1.47
LINC01239-202ENST00000436786 LCE2BO14633 110 aa5.86□□□□□ -1.47
LINC01239-202ENST00000436786 HSPA1AP0DMV8 641 aaKnown RBP5.86□□□□□ -1.47
LINC01239-202ENST00000436786 HSPA1BP0DMV9 641 aaKnown RBP5.86□□□□□ -1.47
LINC01239-202ENST00000436786 GTF2E1P29083 439 aaPredicted RBP5.86□□□□□ -1.47
LINC01239-202ENST00000436786 NYAP1Q6ZVC0 841 aa5.86□□□□□ -1.47
LINC01239-202ENST00000436786 RTKN2Q8IZC4 609 aa5.86□□□□□ -1.47
LINC01239-202ENST00000436786 PNISRQ8TF01 805 aaKnown RBP5.86□□□□□ -1.47
LINC01239-202ENST00000436786 PLEKHF1Q96S99 279 aa5.86□□□□□ -1.47
LINC01239-202ENST00000436786 TAF1DQ9H5J8 278 aaPredicted RBP5.86□□□□□ -1.47
LINC01239-202ENST00000436786 RRP7AQ9Y3A4 280 aaKnown RBP5.86□□□□□ -1.47
LINC01239-202ENST00000436786 IQCA1LA6NCM1 817 aa5.85□□□□□ -1.47
LINC01239-202ENST00000436786 ERVV-1B6SEH8 477 aa5.85□□□□□ -1.47
LINC01239-202ENST00000436786 EIF4A1P60842 406 aaKnown RBP5.85□□□□□ -1.47
LINC01239-202ENST00000436786 NFE2L2Q16236 605 aa5.85□□□□□ -1.47
LINC01239-202ENST00000436786 TTLL7Q6ZT98 887 aa5.85□□□□□ -1.47
LINC01239-202ENST00000436786 NUTM1Q86Y26 1132 aa5.85□□□□□ -1.47
LINC01239-202ENST00000436786 TNS4Q8IZW8 715 aa5.85□□□□□ -1.47
LINC01239-202ENST00000436786 SYNE4Q8N205 404 aa5.85□□□□□ -1.47
LINC01239-202ENST00000436786 STK17AQ9UEE5 414 aa5.85□□□□□ -1.47
LINC01239-202ENST00000436786 MKRN1Q9UHC7 482 aaKnown RBP5.85□□□□□ -1.47
LINC01239-202ENST00000436786 DICER1Q9UPY3 1922 aaKnown RBP5.85□□□□□ -1.47
LINC01239-202ENST00000436786 MAP3K15Q6ZN16 1313 aa5.85□□□□□ -1.47
LINC01239-202ENST00000436786 PASKQ96RG2 1323 aa5.85□□□□□ -1.47
LINC01239-202ENST00000436786 NEFMP07197 916 aa5.85□□□□□ -1.47
LINC01239-202ENST00000436786 MYL6BP14649 208 aa5.85□□□□□ -1.47
LINC01239-202ENST00000436786 GPTP24298 496 aa5.85□□□□□ -1.47
LINC01239-202ENST00000436786 ALDH1B1P30837 517 aa5.85□□□□□ -1.47
LINC01239-202ENST00000436786 LDHDQ86WU2 507 aa5.85□□□□□ -1.47
LINC01239-202ENST00000436786 ZBTB3Q9H5J0 574 aa5.85□□□□□ -1.47
LINC01239-202ENST00000436786 ARFGEF2Q9Y6D5 1785 aa5.85□□□□□ -1.47
LINC01239-202ENST00000436786 CACNA1SQ13698 1873 aa5.84□□□□□ -1.47
LINC01239-202ENST00000436786 ABCC12Q96J65 1359 aa5.84□□□□□ -1.47
LINC01239-202ENST00000436786 FZD9O00144 591 aa5.84□□□□□ -1.47
LINC01239-202ENST00000436786 IARSP41252 1262 aaKnown RBP5.84□□□□□ -1.47
LINC01239-202ENST00000436786 CRY2Q49AN0 593 aa5.84□□□□□ -1.47
LINC01239-202ENST00000436786 EAPPQ56P03 285 aaPredicted RBP5.84□□□□□ -1.47
LINC01239-202ENST00000436786 SUSD4Q5VX71 490 aa5.84□□□□□ -1.47
LINC01239-202ENST00000436786 KIF6Q6ZMV9 814 aa5.84□□□□□ -1.47
LINC01239-202ENST00000436786 SLC51AQ86UW1 340 aa5.84□□□□□ -1.47
LINC01239-202ENST00000436786 NYXQ9GZU5 481 aa5.84□□□□□ -1.47
LINC01239-202ENST00000436786 HACL1Q9UJ83 578 aa5.84□□□□□ -1.47
LINC01239-202ENST00000436786 UBN2Q6ZU65 1347 aa5.84□□□□□ -1.48
LINC01239-202ENST00000436786 HOXA10P31260 410 aaPredicted RBP5.83□□□□□ -1.48
LINC01239-202ENST00000436786 KCNC4Q03721 635 aa5.83□□□□□ -1.48
LINC01239-202ENST00000436786 ZNF34Q8IZ26 560 aa5.83□□□□□ -1.48
LINC01239-202ENST00000436786 RPGRQ92834 1020 aaKnown RBP5.83□□□□□ -1.48
LINC01239-202ENST00000436786 TCERG1O14776 1098 aaKnown RBP5.83□□□□□ -1.48
LINC01239-202ENST00000436786 EPHX2P34913 555 aa5.83□□□□□ -1.48
LINC01239-202ENST00000436786 GPC2Q8N158 579 aa5.83□□□□□ -1.48
LINC01239-202ENST00000436786 MRPL50Q8N5N7 158 aaKnown RBP5.83□□□□□ -1.48
LINC01239-202ENST00000436786 PSMD1Q99460 953 aa5.83□□□□□ -1.48
LINC01239-202ENST00000436786 SNED1Q8TER0 1413 aa5.83□□□□□ -1.48
LINC01239-202ENST00000436786 CNTNAP1P78357 1384 aa5.83□□□□□ -1.48
LINC01239-202ENST00000436786 LAMB4A4D0S4 1761 aa5.83□□□□□ -1.48
LINC01239-202ENST00000436786 KDM3BQ7LBC6 1761 aa5.83□□□□□ -1.48
LINC01239-202ENST00000436786 RNF123Q5XPI4 1314 aa5.83□□□□□ -1.48
LINC01239-202ENST00000436786 MAPK8IP3Q9UPT6 1336 aa5.83□□□□□ -1.48
LINC01239-202ENST00000436786 TMEM88BA6NKF7 163 aa5.82□□□□□ -1.48
LINC01239-202ENST00000436786 NTSR2O95665 410 aa5.82□□□□□ -1.48
LINC01239-202ENST00000436786 VEGFBP49765 207 aa5.82□□□□□ -1.48
LINC01239-202ENST00000436786 PDIA6Q15084 440 aa5.82□□□□□ -1.48
LINC01239-202ENST00000436786 MAP1SQ66K74 1059 aaPredicted RBP5.82□□□□□ -1.48
LINC01239-202ENST00000436786 GIGYF2Q6Y7W6 1299 aaKnown RBP5.82□□□□□ -1.48
LINC01239-202ENST00000436786 PNMA8AQ86V59 439 aaPredicted RBP5.82□□□□□ -1.48
LINC01239-202ENST00000436786 JDP2Q8WYK2 163 aa5.82□□□□□ -1.48
LINC01239-202ENST00000436786 RBM17Q96I25 401 aaKnown RBP5.82□□□□□ -1.48
LINC01239-202ENST00000436786 PNNQ9H307 717 aaKnown RBP5.82□□□□□ -1.48
LINC01239-202ENST00000436786 TSPYL4Q9UJ04 414 aa5.82□□□□□ -1.48
LINC01239-202ENST00000436786 GJA3Q9Y6H8 435 aa5.82□□□□□ -1.48
LINC01239-202ENST00000436786 COL4A5P29400 1685 aa5.82□□□□□ -1.48
LINC01239-202ENST00000436786 PPEF1O14829 653 aaPredicted RBP5.82□□□□□ -1.48
LINC01239-202ENST00000436786 EIF2S2P20042 333 aaKnown RBP5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms