RNA–Protein interactions for RNA: ENST00000434667.3

SCAF4-203, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 3,846 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-203ENST00000434667 HAP1P54257 671 aaPredicted RBP12.39□□□□□ -0.43
SCAF4-203ENST00000434667 AIMP1Q12904 312 aaKnown RBP12.39□□□□□ -0.43
SCAF4-203ENST00000434667 CREB3L3Q68CJ9 461 aa12.39□□□□□ -0.43
SCAF4-203ENST00000434667 GOLGA6L6A8MZA4 724 aa12.38□□□□□ -0.43
SCAF4-203ENST00000434667 IFIT2P09913 472 aaKnown RBP12.38□□□□□ -0.43
SCAF4-203ENST00000434667 ZNF589Q86UQ0 364 aaPredicted RBP12.38□□□□□ -0.43
SCAF4-203ENST00000434667 GTPBP4Q9BZE4 634 aaKnown RBP12.38□□□□□ -0.43
SCAF4-203ENST00000434667 KMT5BQ4FZB7 885 aa12.38□□□□□ -0.43
SCAF4-203ENST00000434667 ISM2Q6H9L7 571 aa12.38□□□□□ -0.43
SCAF4-203ENST00000434667 LMOD2Q6P5Q4 547 aa12.38□□□□□ -0.43
SCAF4-203ENST00000434667 ATP6V1DQ9Y5K8 247 aa12.38□□□□□ -0.43
SCAF4-203ENST00000434667 C5P01031 1676 aa12.38□□□□□ -0.43
SCAF4-203ENST00000434667 PROSER3Q2NL68 480 aa12.38□□□□□ -0.43
SCAF4-203ENST00000434667 CREBRFQ8IUR6 639 aa12.38□□□□□ -0.43
SCAF4-203ENST00000434667 IL17RAQ96F46 866 aa12.38□□□□□ -0.43
SCAF4-203ENST00000434667 SEC62Q99442 399 aaKnown RBP12.38□□□□□ -0.43
SCAF4-203ENST00000434667 SCN11AQ9UI33 1791 aa12.38□□□□□ -0.43
SCAF4-203ENST00000434667 LEO1Q8WVC0 666 aaPredicted RBP12.37□□□□□ -0.43
SCAF4-203ENST00000434667 KIF1BPQ96EK5 621 aa12.37□□□□□ -0.43
SCAF4-203ENST00000434667 TMX1Q9H3N1 280 aa12.37□□□□□ -0.43
SCAF4-203ENST00000434667 PLEKHG3A1L390 1219 aa12.37□□□□□ -0.43
SCAF4-203ENST00000434667 PIP4K2AP48426 406 aaPredicted RBP12.37□□□□□ -0.43
SCAF4-203ENST00000434667 GNL2Q13823 731 aaKnown RBP12.37□□□□□ -0.43
SCAF4-203ENST00000434667 STK11IPQ8N1F8 1099 aa12.37□□□□□ -0.43
SCAF4-203ENST00000434667 UBR2Q8IWV8 1755 aa12.37□□□□□ -0.43
SCAF4-203ENST00000434667 CEP135Q66GS9 1140 aa12.37□□□□□ -0.43
SCAF4-203ENST00000434667 FAM177A1Q8N128 213 aaPredicted RBP12.37□□□□□ -0.43
SCAF4-203ENST00000434667 CHST3Q7LGC8 479 aa12.36□□□□□ -0.43
SCAF4-203ENST00000434667 GTF3C6Q969F1 213 aa12.36□□□□□ -0.43
SCAF4-203ENST00000434667 TNRQ92752 1358 aa12.36□□□□□ -0.43
SCAF4-203ENST00000434667 A0A0G2JLW4 131 aa12.36□□□□□ -0.43
SCAF4-203ENST00000434667 RAB11FIP4Q86YS3 637 aa12.36□□□□□ -0.43
SCAF4-203ENST00000434667 ZSWIM6Q9HCJ5 1215 aa12.36□□□□□ -0.43
SCAF4-203ENST00000434667 ARHGEF10O15013 1369 aa12.36□□□□□ -0.43
SCAF4-203ENST00000434667 RGPD5Q99666 1765 aa12.36□□□□□ -0.43
SCAF4-203ENST00000434667 GNAT3A8MTJ3 354 aa12.36□□□□□ -0.43
SCAF4-203ENST00000434667 SLC27A2O14975 620 aa12.36□□□□□ -0.43
SCAF4-203ENST00000434667 EPC1Q9H2F5 836 aa12.36□□□□□ -0.43
SCAF4-203ENST00000434667 FBXO38Q6PIJ6 1188 aa12.35□□□□□ -0.43
SCAF4-203ENST00000434667 NGDNQ8NEJ9 315 aaKnown RBP12.35□□□□□ -0.43
SCAF4-203ENST00000434667 GTF2E1P29083 439 aaPredicted RBP12.35□□□□□ -0.43
SCAF4-203ENST00000434667 NLRP6P59044 892 aa12.35□□□□□ -0.43
SCAF4-203ENST00000434667 NECTIN1Q15223 517 aa12.35□□□□□ -0.43
SCAF4-203ENST00000434667 VPS53Q5VIR6 699 aa12.35□□□□□ -0.43
SCAF4-203ENST00000434667 BRF1Q92994 677 aa12.35□□□□□ -0.43
SCAF4-203ENST00000434667 SLFN14P0C7P3 912 aa12.35□□□□□ -0.43
SCAF4-203ENST00000434667 SKILP12757 684 aa12.35□□□□□ -0.43
SCAF4-203ENST00000434667 GOLGA8FQ08AF8 430 aa12.35□□□□□ -0.43
SCAF4-203ENST00000434667 GOLGA8DPQ0D2H9 430 aa12.35□□□□□ -0.43
SCAF4-203ENST00000434667 CLASRPQ8N2M8 674 aaKnown RBP12.35□□□□□ -0.43
SCAF4-203ENST00000434667 EAF2Q96CJ1 260 aaPredicted RBP12.35□□□□□ -0.43
SCAF4-203ENST00000434667 CCDC171Q6TFL3 1326 aa12.35□□□□□ -0.43
SCAF4-203ENST00000434667 BECN2A8MW95 431 aa12.34□□□□□ -0.43
SCAF4-203ENST00000434667 BIN1O00499 593 aa12.34□□□□□ -0.43
SCAF4-203ENST00000434667 ZKSCAN1P17029 563 aaPredicted RBP12.34□□□□□ -0.43
SCAF4-203ENST00000434667 CCT2P78371 535 aaKnown RBP12.34□□□□□ -0.43
SCAF4-203ENST00000434667 TOB2Q14106 344 aaPredicted RBP12.34□□□□□ -0.43
SCAF4-203ENST00000434667 PLA2G4DQ86XP0 818 aa12.34□□□□□ -0.43
SCAF4-203ENST00000434667 KIF18AQ8NI77 898 aa12.34□□□□□ -0.43
SCAF4-203ENST00000434667 FSD1Q9BTV5 496 aa12.34□□□□□ -0.43
SCAF4-203ENST00000434667 C9orf78Q9NZ63 289 aaPredicted RBP12.34□□□□□ -0.43
SCAF4-203ENST00000434667 OGFRQ9NZT2 677 aa12.34□□□□□ -0.43
SCAF4-203ENST00000434667 SMTNL1A8MU46 457 aa12.34□□□□□ -0.43
SCAF4-203ENST00000434667 OTUD7BQ6GQQ9 843 aa12.34□□□□□ -0.43
SCAF4-203ENST00000434667 MPRIPQ6WCQ1 1025 aa12.34□□□□□ -0.43
SCAF4-203ENST00000434667 TULP1O00294 542 aaPredicted RBP12.34□□□□□ -0.43
SCAF4-203ENST00000434667 POLA2Q14181 598 aa12.34□□□□□ -0.43
SCAF4-203ENST00000434667 GOLPH3LQ9H4A5 285 aa12.34□□□□□ -0.43
SCAF4-203ENST00000434667 NCOA5Q9HCD5 579 aaKnown RBP12.34□□□□□ -0.43
SCAF4-203ENST00000434667 KIF1AQ12756 1690 aa12.34□□□□□ -0.43
SCAF4-203ENST00000434667 ABCA3Q99758 1704 aa12.34□□□□□ -0.43
SCAF4-203ENST00000434667 LAMB4A4D0S4 1761 aa12.34□□□□□ -0.43
SCAF4-203ENST00000434667 BLOC1S2Q6QNY1 142 aa12.33□□□□□ -0.44
SCAF4-203ENST00000434667 SETD1BQ9UPS6 1966 aaKnown RBP12.33□□□□□ -0.44
SCAF4-203ENST00000434667 CCDC69A6NI79 296 aa12.33□□□□□ -0.44
SCAF4-203ENST00000434667 KIF20AO95235 890 aa12.33□□□□□ -0.44
SCAF4-203ENST00000434667 ERCC6LQ2NKX8 1250 aa12.33□□□□□ -0.44
SCAF4-203ENST00000434667 LRRC8AQ8IWT6 810 aa12.33□□□□□ -0.44
SCAF4-203ENST00000434667 DNAAF4Q8WXU2 420 aa12.33□□□□□ -0.44
SCAF4-203ENST00000434667 ECHDC1Q9NTX5 307 aa12.33□□□□□ -0.44
SCAF4-203ENST00000434667 DDX41Q9UJV9 622 aaKnown RBP12.33□□□□□ -0.44
SCAF4-203ENST00000434667 GLRX3O76003 335 aaKnown RBP12.33□□□□□ -0.44
SCAF4-203ENST00000434667 BEND3Q5T5X7 828 aa12.33□□□□□ -0.44
SCAF4-203ENST00000434667 MRC1P22897 1456 aa12.33□□□□□ -0.44
SCAF4-203ENST00000434667 NUP188Q5SRE5 1749 aa12.32□□□□□ -0.44
SCAF4-203ENST00000434667 GOLGA6L19H0YKK7 550 aa12.32□□□□□ -0.44
SCAF4-203ENST00000434667 HSP90AA4PQ58FG1 418 aa12.32□□□□□ -0.44
SCAF4-203ENST00000434667 HOMER1Q86YM7 354 aa12.32□□□□□ -0.44
SCAF4-203ENST00000434667 CLSTN2Q9H4D0 955 aa12.32□□□□□ -0.44
SCAF4-203ENST00000434667 GJB4Q9NTQ9 266 aa12.32□□□□□ -0.44
SCAF4-203ENST00000434667 H3BQV1 296 aa12.32□□□□□ -0.44
SCAF4-203ENST00000434667 RBM6P78332 1123 aaKnown RBP12.32□□□□□ -0.44
SCAF4-203ENST00000434667 IFFO2Q5TF58 517 aa12.32□□□□□ -0.44
SCAF4-203ENST00000434667 MAP3K2Q9Y2U5 619 aa12.32□□□□□ -0.44
SCAF4-203ENST00000434667 A0A0G2JS52 829 aa12.32□□□□□ -0.44
SCAF4-203ENST00000434667 PTPN14Q15678 1187 aa12.32□□□□□ -0.44
SCAF4-203ENST00000434667 AOPEPQ8N6M6 819 aa12.32□□□□□ -0.44
SCAF4-203ENST00000434667 TMEM51Q9NW97 253 aa12.32□□□□□ -0.44
SCAF4-203ENST00000434667 ZNF446Q9NWS9 450 aa12.32□□□□□ -0.44
SCAF4-203ENST00000434667 SASH1O94885 1247 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 222.1 ms