RNA–Protein interactions for RNA: ENST00000434316.6

TMCO3-202, Transcript of transmembrane and coiled-coil domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMCO3, Length 3,050 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO3-202ENST00000434316 RNF20Q5VTR2 975 aa17.68■□□□□ 0.42
TMCO3-202ENST00000434316 RBM43Q6ZSC3 357 aaKnown RBP17.68■□□□□ 0.42
TMCO3-202ENST00000434316 SNRKQ9NRH2 765 aa17.68■□□□□ 0.42
TMCO3-202ENST00000434316 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.67■□□□□ 0.42
TMCO3-202ENST00000434316 GIGYF1O75420 1035 aaPredicted RBP17.67■□□□□ 0.42
TMCO3-202ENST00000434316 ZNF165P49910 485 aa17.67■□□□□ 0.42
TMCO3-202ENST00000434316 TDRD7Q8NHU6 1098 aaKnown RBP17.67■□□□□ 0.42
TMCO3-202ENST00000434316 LTN1O94822 1766 aa17.67■□□□□ 0.42
TMCO3-202ENST00000434316 CHGBP05060 677 aa17.67■□□□□ 0.42
TMCO3-202ENST00000434316 CCDC144BQ3MJ40 725 aa17.67■□□□□ 0.42
TMCO3-202ENST00000434316 UTP14CQ5TAP6 766 aaKnown RBP17.67■□□□□ 0.42
TMCO3-202ENST00000434316 CCDC144CPQ8IYA2 1237 aa17.67■□□□□ 0.42
TMCO3-202ENST00000434316 KCNA6P17658 529 aa17.66■□□□□ 0.42
TMCO3-202ENST00000434316 AKAP4Q5JQC9 854 aa17.66■□□□□ 0.42
TMCO3-202ENST00000434316 NCBP1Q09161 790 aaKnown RBP17.66■□□□□ 0.42
TMCO3-202ENST00000434316 NAA30Q147X3 362 aaPredicted RBP17.66■□□□□ 0.42
TMCO3-202ENST00000434316 CACTINQ8WUQ7 758 aaKnown RBP17.66■□□□□ 0.42
TMCO3-202ENST00000434316 BRF1Q92994 677 aa17.66■□□□□ 0.42
TMCO3-202ENST00000434316 BCL11BQ9C0K0 894 aaPredicted RBP17.66■□□□□ 0.42
TMCO3-202ENST00000434316 NDUFB9Q9Y6M9 179 aa17.66■□□□□ 0.42
TMCO3-202ENST00000434316 RGPD2P0DJD1 1756 aa17.66■□□□□ 0.42
TMCO3-202ENST00000434316 RNMTO43148 476 aaKnown RBP17.66■□□□□ 0.42
TMCO3-202ENST00000434316 COL15A1P39059 1388 aa17.65■□□□□ 0.42
TMCO3-202ENST00000434316 TNNT1P13805 278 aa17.65■□□□□ 0.42
TMCO3-202ENST00000434316 CEBPZQ03701 1054 aaKnown RBP17.65■□□□□ 0.42
TMCO3-202ENST00000434316 RESTQ13127 1097 aa17.65■□□□□ 0.42
TMCO3-202ENST00000434316 CHMP4AQ9BY43 222 aa17.65■□□□□ 0.42
TMCO3-202ENST00000434316 CLIP2Q9UDT6 1046 aa17.65■□□□□ 0.42
TMCO3-202ENST00000434316 TAF5LO75529 589 aa17.65■□□□□ 0.42
TMCO3-202ENST00000434316 LINS1Q8NG48 757 aa17.65■□□□□ 0.42
TMCO3-202ENST00000434316 PXDNQ92626 1479 aa17.64■□□□□ 0.42
TMCO3-202ENST00000434316 PDIA4P13667 645 aaKnown RBP17.64■□□□□ 0.41
TMCO3-202ENST00000434316 FOSBP53539 338 aa17.64■□□□□ 0.41
TMCO3-202ENST00000434316 ADGRL3Q9HAR2 1447 aa17.64■□□□□ 0.41
TMCO3-202ENST00000434316 CCDC129Q6ZRS4 1044 aa17.64■□□□□ 0.41
TMCO3-202ENST00000434316 LRRC2Q9BYS8 371 aa17.64■□□□□ 0.41
TMCO3-202ENST00000434316 ALDH8A1Q9H2A2 487 aaPredicted RBP17.64■□□□□ 0.41
TMCO3-202ENST00000434316 ANKARQ7Z5J8 1434 aa17.64■□□□□ 0.41
TMCO3-202ENST00000434316 A0A087WWV3 80 aa17.63■□□□□ 0.41
TMCO3-202ENST00000434316 ARID5BQ14865 1188 aa17.63■□□□□ 0.41
TMCO3-202ENST00000434316 GTF3C6Q969F1 213 aa17.63■□□□□ 0.41
TMCO3-202ENST00000434316 IGKV5-2P06315 115 aa17.63■□□□□ 0.41
TMCO3-202ENST00000434316 PLEKHO1Q53GL0 409 aaPredicted RBP17.63■□□□□ 0.41
TMCO3-202ENST00000434316 EPHA10Q5JZY3 1008 aa17.63■□□□□ 0.41
TMCO3-202ENST00000434316 C11orf57Q6ZUT1 292 aaPredicted RBP17.63■□□□□ 0.41
TMCO3-202ENST00000434316 FTOQ9C0B1 505 aaKnown RBP eCLIP17.63■□□□□ 0.413e-6■□□□□ 11.1
TMCO3-202ENST00000434316 SMTNL1A8MU46 457 aa17.62■□□□□ 0.41
TMCO3-202ENST00000434316 IGSF3O75054 1194 aa17.62■□□□□ 0.41
TMCO3-202ENST00000434316 Q6ZUG5 572 aa17.62■□□□□ 0.41
TMCO3-202ENST00000434316 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.62■□□□□ 0.41
TMCO3-202ENST00000434316 RBM33Q96EV2 1170 aaKnown RBP17.62■□□□□ 0.41
TMCO3-202ENST00000434316 HSP90B1P14625 803 aaKnown RBP17.62■□□□□ 0.41
TMCO3-202ENST00000434316 SEC62Q99442 399 aaKnown RBP17.62■□□□□ 0.41
TMCO3-202ENST00000434316 HMG20BQ9P0W2 317 aa17.62■□□□□ 0.41
TMCO3-202ENST00000434316 HDAC5Q9UQL6 1122 aa17.62■□□□□ 0.41
TMCO3-202ENST00000434316 JCADQ9P266 1359 aa17.62■□□□□ 0.41
TMCO3-202ENST00000434316 H3BQV1 296 aa17.61■□□□□ 0.41
TMCO3-202ENST00000434316 TPD52L1Q16890 204 aaPredicted RBP17.61■□□□□ 0.41
TMCO3-202ENST00000434316 TSGA10IPQ3SY00 556 aa17.61■□□□□ 0.41
TMCO3-202ENST00000434316 IFFO2Q5TF58 517 aa17.61■□□□□ 0.41
TMCO3-202ENST00000434316 NEK1Q96PY6 1258 aa17.61■□□□□ 0.41
TMCO3-202ENST00000434316 USP54Q70EL1 1684 aa17.61■□□□□ 0.41
TMCO3-202ENST00000434316 UTYO14607 1347 aa17.61■□□□□ 0.41
TMCO3-202ENST00000434316 C1orf141Q5JVX7 400 aa17.61■□□□□ 0.41
TMCO3-202ENST00000434316 PHF8Q9UPP1 1060 aa17.61■□□□□ 0.41
TMCO3-202ENST00000434316 LMO7Q8WWI1 1683 aa17.61■□□□□ 0.41
TMCO3-202ENST00000434316 IQCB1Q15051 598 aa17.61■□□□□ 0.41
TMCO3-202ENST00000434316 ZNF592Q92610 1267 aa17.6■□□□□ 0.41
TMCO3-202ENST00000434316 USP27XA6NNY8 438 aa17.6■□□□□ 0.41
TMCO3-202ENST00000434316 USPL1Q5W0Q7 1092 aa17.6■□□□□ 0.41
TMCO3-202ENST00000434316 GTPBP4Q9BZE4 634 aaKnown RBP17.6■□□□□ 0.41
TMCO3-202ENST00000434316 HEG1Q9ULI3 1381 aa17.59■□□□□ 0.41
TMCO3-202ENST00000434316 NFAT5O94916 1531 aa17.59■□□□□ 0.41
TMCO3-202ENST00000434316 PPFIA3O75145 1194 aa17.59■□□□□ 0.41
TMCO3-202ENST00000434316 SCRN1Q12765 414 aa17.59■□□□□ 0.41
TMCO3-202ENST00000434316 PDIA6Q15084 440 aa17.59■□□□□ 0.41
TMCO3-202ENST00000434316 RIC3Q7Z5B4 369 aa17.59■□□□□ 0.41
TMCO3-202ENST00000434316 DBNLQ9UJU6 430 aaKnown RBP17.59■□□□□ 0.41
TMCO3-202ENST00000434316 ARHGAP23Q9P227 1491 aa17.59■□□□□ 0.41
TMCO3-202ENST00000434316 SLIT1O75093 1534 aa17.59■□□□□ 0.41
TMCO3-202ENST00000434316 CYP21A2P08686 494 aa17.58■□□□□ 0.41
TMCO3-202ENST00000434316 GOLPH3LQ9H4A5 285 aa17.58■□□□□ 0.41
TMCO3-202ENST00000434316 GOLGA6L19H0YKK7 550 aa17.58■□□□□ 0.4
TMCO3-202ENST00000434316 MYL6BP14649 208 aa17.58■□□□□ 0.4
TMCO3-202ENST00000434316 ADD1P35611 737 aaKnown RBP17.58■□□□□ 0.4
TMCO3-202ENST00000434316 CCDC112Q8NEF3 446 aa17.58■□□□□ 0.4
TMCO3-202ENST00000434316 DDX21Q9NR30 783 aaKnown RBP eCLIP17.58■□□□□ 0.4
TMCO3-202ENST00000434316 ZNF609O15014 1411 aa17.58■□□□□ 0.4
TMCO3-202ENST00000434316 DDX58O95786 925 aaKnown RBP17.58■□□□□ 0.4
TMCO3-202ENST00000434316 LRRC8AQ8IWT6 810 aa17.58■□□□□ 0.4
TMCO3-202ENST00000434316 DNAJC2Q99543 621 aaKnown RBP17.58■□□□□ 0.4
TMCO3-202ENST00000434316 KRT32Q14532 448 aa17.57■□□□□ 0.4
TMCO3-202ENST00000434316 CCAR1Q8IX12 1150 aaKnown RBP17.57■□□□□ 0.4
TMCO3-202ENST00000434316 ERCC4Q92889 916 aaPredicted RBP17.57■□□□□ 0.4
TMCO3-202ENST00000434316 CCDC9Q9Y3X0 531 aaKnown RBP17.57■□□□□ 0.4
TMCO3-202ENST00000434316 USP16Q9Y5T5 823 aa17.57■□□□□ 0.4
TMCO3-202ENST00000434316 SLC39A6Q13433 755 aa17.57■□□□□ 0.4
TMCO3-202ENST00000434316 CEP135Q66GS9 1140 aa17.57■□□□□ 0.4
TMCO3-202ENST00000434316 STOX1Q6ZVD7 989 aa17.57■□□□□ 0.4
TMCO3-202ENST00000434316 CTNNA3Q9UI47 895 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms