RNA–Protein interactions for RNA: ENST00000432796.2

HOXD3-203, Transcript of homeobox D3, humanhuman

TSL 3

Gene HOXD3, Length 428 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD3-203ENST00000432796 KIAA2012Q0VF49 1180 aa13.67□□□□□ -0.22
HOXD3-203ENST00000432796 DPF2Q92785 391 aa13.67□□□□□ -0.22
HOXD3-203ENST00000432796 DCPSQ96C86 337 aaKnown RBP13.67□□□□□ -0.22
HOXD3-203ENST00000432796 GNAT3A8MTJ3 354 aa13.66□□□□□ -0.22
HOXD3-203ENST00000432796 KCNQ3O43525 872 aa13.66□□□□□ -0.22
HOXD3-203ENST00000432796 NEFMP07197 916 aa13.66□□□□□ -0.22
HOXD3-203ENST00000432796 INTS3Q68E01 1043 aaKnown RBP13.66□□□□□ -0.22
HOXD3-203ENST00000432796 SAMD7Q7Z3H4 446 aa13.66□□□□□ -0.22
HOXD3-203ENST00000432796 SLC17A8Q8NDX2 589 aa13.66□□□□□ -0.22
HOXD3-203ENST00000432796 IBTKQ9P2D0 1353 aaPredicted RBP13.66□□□□□ -0.22
HOXD3-203ENST00000432796 AKAP11Q9UKA4 1901 aa13.65□□□□□ -0.22
HOXD3-203ENST00000432796 PRAMEF22A3QJZ6 481 aa13.65□□□□□ -0.22
HOXD3-203ENST00000432796 BTBD11A6QL63 1104 aa13.65□□□□□ -0.22
HOXD3-203ENST00000432796 NBPF26B4DH59 902 aa13.65□□□□□ -0.22
HOXD3-203ENST00000432796 SNRPA1P09661 255 aaKnown RBP13.65□□□□□ -0.22
HOXD3-203ENST00000432796 TBC1D10BQ4KMP7 808 aaPredicted RBP13.65□□□□□ -0.22
HOXD3-203ENST00000432796 NBPF10Q6P3W6 841 aaKnown RBP13.65□□□□□ -0.22
HOXD3-203ENST00000432796 GAS2L2Q8NHY3 880 aa13.65□□□□□ -0.22
HOXD3-203ENST00000432796 CEMIPQ8WUJ3 1361 aa13.65□□□□□ -0.22
HOXD3-203ENST00000432796 YDJCA8MPS7 323 aa13.64□□□□□ -0.23
HOXD3-203ENST00000432796 PER1O15534 1290 aaPredicted RBP13.64□□□□□ -0.23
HOXD3-203ENST00000432796 EGFRP00533 1210 aa13.64□□□□□ -0.23
HOXD3-203ENST00000432796 DPP8Q6V1X1 898 aaPredicted RBP13.64□□□□□ -0.23
HOXD3-203ENST00000432796 SULF1Q8IWU6 871 aa13.64□□□□□ -0.23
HOXD3-203ENST00000432796 ZBTB12Q9Y330 459 aaPredicted RBP13.64□□□□□ -0.23
HOXD3-203ENST00000432796 CENPFP49454 3210 aa13.64□□□□□ -0.23
HOXD3-203ENST00000432796 CUL9Q8IWT3 2517 aa13.64□□□□□ -0.23
HOXD3-203ENST00000432796 FKTNO75072 461 aa13.63□□□□□ -0.23
HOXD3-203ENST00000432796 FKBP1BP68106 108 aa13.63□□□□□ -0.23
HOXD3-203ENST00000432796 C3orf67Q6ZVT6 689 aa13.62□□□□□ -0.23
HOXD3-203ENST00000432796 CDCA5Q96FF9 252 aa13.62□□□□□ -0.23
HOXD3-203ENST00000432796 CFHR5Q9BXR6 569 aa13.62□□□□□ -0.23
HOXD3-203ENST00000432796 SIPA1L3O60292 1781 aaPredicted RBP13.62□□□□□ -0.23
HOXD3-203ENST00000432796 RANBP2P49792 3224 aaKnown RBP13.61□□□□□ -0.23
HOXD3-203ENST00000432796 ERVV-1B6SEH8 477 aa13.61□□□□□ -0.23
HOXD3-203ENST00000432796 RPS12P25398 132 aaKnown RBP13.61□□□□□ -0.23
HOXD3-203ENST00000432796 TM4SF4P48230 202 aa13.61□□□□□ -0.23
HOXD3-203ENST00000432796 MPNDQ8N594 471 aa13.61□□□□□ -0.23
HOXD3-203ENST00000432796 GGA3Q9NZ52 723 aa13.61□□□□□ -0.23
HOXD3-203ENST00000432796 UBN2Q6ZU65 1347 aa13.61□□□□□ -0.23
HOXD3-203ENST00000432796 PSMD14O00487 310 aa13.6□□□□□ -0.23
HOXD3-203ENST00000432796 SP8Q8IXZ3 490 aa13.6□□□□□ -0.23
HOXD3-203ENST00000432796 NLRP3Q96P20 1036 aa13.6□□□□□ -0.23
HOXD3-203ENST00000432796 TRIOBPQ9H2D6 2365 aa13.6□□□□□ -0.23
HOXD3-203ENST00000432796 ABCC4O15439 1325 aa13.6□□□□□ -0.23
HOXD3-203ENST00000432796 COL6A3P12111 3177 aa13.59□□□□□ -0.23
HOXD3-203ENST00000432796 BBOX1O75936 387 aa13.59□□□□□ -0.23
HOXD3-203ENST00000432796 NTSR2O95665 410 aa13.59□□□□□ -0.23
HOXD3-203ENST00000432796 GPTP24298 496 aa13.59□□□□□ -0.23
HOXD3-203ENST00000432796 KIF4BQ2VIQ3 1234 aa13.59□□□□□ -0.23
HOXD3-203ENST00000432796 RBM26Q5T8P6 1007 aaKnown RBP13.59□□□□□ -0.23
HOXD3-203ENST00000432796 SUSD4Q5VX71 490 aa13.59□□□□□ -0.23
HOXD3-203ENST00000432796 RTF1Q92541 710 aaKnown RBP13.59□□□□□ -0.23
HOXD3-203ENST00000432796 OTUD5Q96G74 571 aa13.59□□□□□ -0.23
HOXD3-203ENST00000432796 MAP3K15Q6ZN16 1313 aa13.59□□□□□ -0.23
HOXD3-203ENST00000432796 U2AF1L5P0DN76 240 aaPredicted RBP13.58□□□□□ -0.24
HOXD3-203ENST00000432796 EN2P19622 333 aaPredicted RBP13.58□□□□□ -0.24
HOXD3-203ENST00000432796 U2AF1Q01081 240 aaKnown RBP eCLIP13.58□□□□□ -0.24
HOXD3-203ENST00000432796 TRIM17Q9Y577 477 aa13.58□□□□□ -0.24
HOXD3-203ENST00000432796 SREBF2Q12772 1141 aa13.57□□□□□ -0.24
HOXD3-203ENST00000432796 OTOP1Q7RTM1 612 aa13.57□□□□□ -0.24
HOXD3-203ENST00000432796 PAPPA2Q9BXP8 1791 aa13.57□□□□□ -0.24
HOXD3-203ENST00000432796 COL3A1P02461 1466 aaPredicted RBP13.56□□□□□ -0.24
HOXD3-203ENST00000432796 KIF6Q6ZMV9 814 aa13.56□□□□□ -0.24
HOXD3-203ENST00000432796 ARMC5Q96C12 935 aa13.56□□□□□ -0.24
HOXD3-203ENST00000432796 PNNQ9H307 717 aaKnown RBP13.56□□□□□ -0.24
HOXD3-203ENST00000432796 R3HDMLQ9H3Y0 253 aa13.56□□□□□ -0.24
HOXD3-203ENST00000432796 ASTN2O75129 1339 aaPredicted RBP13.56□□□□□ -0.24
HOXD3-203ENST00000432796 H0YGN5 161 aa13.55□□□□□ -0.24
HOXD3-203ENST00000432796 PRKAR2BP31323 418 aa13.55□□□□□ -0.24
HOXD3-203ENST00000432796 MNX1P50219 401 aaPredicted RBP13.55□□□□□ -0.24
HOXD3-203ENST00000432796 PPP1R42Q7Z4L9 355 aa13.55□□□□□ -0.24
HOXD3-203ENST00000432796 ZNF34Q8IZ26 560 aa13.55□□□□□ -0.24
HOXD3-203ENST00000432796 DUOX1Q9NRD9 1551 aa13.54□□□□□ -0.24
HOXD3-203ENST00000432796 PPP2R1AP30153 589 aa13.54□□□□□ -0.24
HOXD3-203ENST00000432796 WASHC4Q2M389 1173 aa13.54□□□□□ -0.24
HOXD3-203ENST00000432796 PARP10Q53GL7 1025 aa13.54□□□□□ -0.24
HOXD3-203ENST00000432796 SLC10A5Q5PT55 438 aa13.54□□□□□ -0.24
HOXD3-203ENST00000432796 ANGEL2Q5VTE6 544 aaKnown RBP13.54□□□□□ -0.24
HOXD3-203ENST00000432796 CHRDL2Q6WN34 429 aa13.54□□□□□ -0.24
HOXD3-203ENST00000432796 TTLL7Q6ZT98 887 aa13.54□□□□□ -0.24
HOXD3-203ENST00000432796 MOB2Q70IA6 237 aa13.54□□□□□ -0.24
HOXD3-203ENST00000432796 NGEFQ8N5V2 710 aa13.54□□□□□ -0.24
HOXD3-203ENST00000432796 DBNDD1Q9H9R9 158 aa13.54□□□□□ -0.24
HOXD3-203ENST00000432796 RTL9Q8NET4 1388 aa13.54□□□□□ -0.24
HOXD3-203ENST00000432796 RBBP6Q7Z6E9 1792 aaKnown RBP13.53□□□□□ -0.24
HOXD3-203ENST00000432796 UBE2Q2LH0YL09 131 aa13.53□□□□□ -0.24
HOXD3-203ENST00000432796 ALDH1A1P00352 501 aa13.53□□□□□ -0.24
HOXD3-203ENST00000432796 ZBTB3Q9H5J0 574 aa13.53□□□□□ -0.24
HOXD3-203ENST00000432796 PTPN22Q9Y2R2 807 aa13.53□□□□□ -0.24
HOXD3-203ENST00000432796 CEP290O15078 2479 aa13.52□□□□□ -0.24
HOXD3-203ENST00000432796 MKRN3Q13064 507 aaKnown RBP13.52□□□□□ -0.25
HOXD3-203ENST00000432796 GRAPQ13588 217 aa13.52□□□□□ -0.25
HOXD3-203ENST00000432796 SCARF1Q14162 830 aa13.52□□□□□ -0.25
HOXD3-203ENST00000432796 TMC4Q7Z404 712 aa13.52□□□□□ -0.25
HOXD3-203ENST00000432796 GRAPLQ8TC17 118 aaPredicted RBP13.52□□□□□ -0.25
HOXD3-203ENST00000432796 TMEM106CQ9BVX2 250 aa13.52□□□□□ -0.25
HOXD3-203ENST00000432796 PITPNM2Q9BZ72 1349 aa13.52□□□□□ -0.25
HOXD3-203ENST00000432796 MAPK8IP3Q9UPT6 1336 aa13.52□□□□□ -0.25
HOXD3-203ENST00000432796 KIAA0100Q14667 2235 aaKnown RBP13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 128.7 ms