RNA–Protein interactions for RNA: ENST00000429650.1

SNRNP200-202, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 2

Gene SNRNP200, Length 2,637 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-202ENST00000429650 RPS6KB1P23443 525 aa15.86■□□□□ 0.13
SNRNP200-202ENST00000429650 ANKRD1Q15327 319 aa15.86■□□□□ 0.13
SNRNP200-202ENST00000429650 ALDH8A1Q9H2A2 487 aaPredicted RBP15.86■□□□□ 0.13
SNRNP200-202ENST00000429650 GIMAP6Q6P9H5 292 aa15.86■□□□□ 0.13
SNRNP200-202ENST00000429650 ANKRD13DQ6ZTN6 518 aa15.86■□□□□ 0.13
SNRNP200-202ENST00000429650 EDC3Q96F86 508 aaKnown RBP15.86■□□□□ 0.13
SNRNP200-202ENST00000429650 TCEANC2Q96MN5 208 aa15.86■□□□□ 0.13
SNRNP200-202ENST00000429650 RFX5P48382 616 aaPredicted RBP15.85■□□□□ 0.13
SNRNP200-202ENST00000429650 AFDNP55196 1824 aaKnown RBP15.85■□□□□ 0.13
SNRNP200-202ENST00000429650 CDC37L1Q7L3B6 337 aa15.85■□□□□ 0.13
SNRNP200-202ENST00000429650 HMG20BQ9P0W2 317 aa15.85■□□□□ 0.13
SNRNP200-202ENST00000429650 DBNLQ9UJU6 430 aaKnown RBP15.85■□□□□ 0.13
SNRNP200-202ENST00000429650 TAF5LO75529 589 aa15.85■□□□□ 0.13
SNRNP200-202ENST00000429650 TOB2Q14106 344 aaPredicted RBP15.85■□□□□ 0.13
SNRNP200-202ENST00000429650 TSGA10IPQ3SY00 556 aa15.85■□□□□ 0.13
SNRNP200-202ENST00000429650 PROSER2Q86WR7 435 aaPredicted RBP15.85■□□□□ 0.13
SNRNP200-202ENST00000429650 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.85■□□□□ 0.131e-8■□□□□ 8.5
SNRNP200-202ENST00000429650 USP16Q9Y5T5 823 aa15.85■□□□□ 0.13
SNRNP200-202ENST00000429650 ADCY5O95622 1261 aa15.84■□□□□ 0.13
SNRNP200-202ENST00000429650 ATP5JP18859 108 aa15.84■□□□□ 0.13
SNRNP200-202ENST00000429650 PTPN12Q05209 780 aaKnown RBP15.84■□□□□ 0.13
SNRNP200-202ENST00000429650 IFNL2Q8IZJ0 200 aa15.84■□□□□ 0.13
SNRNP200-202ENST00000429650 JARID2Q92833 1246 aaPredicted RBP15.84■□□□□ 0.13
SNRNP200-202ENST00000429650 DDX17Q92841 729 aaKnown RBP15.84■□□□□ 0.13
SNRNP200-202ENST00000429650 ADAMTSL3P82987 1691 aa15.84■□□□□ 0.13
SNRNP200-202ENST00000429650 SNRPA1P09661 255 aaKnown RBP15.84■□□□□ 0.13
SNRNP200-202ENST00000429650 PDCP20941 246 aa15.84■□□□□ 0.13
SNRNP200-202ENST00000429650 PIP4K2AP48426 406 aaPredicted RBP15.84■□□□□ 0.13
SNRNP200-202ENST00000429650 TNNI3KQ59H18 835 aa15.84■□□□□ 0.13
SNRNP200-202ENST00000429650 FPGT-TNNI3KV9GXZ4 949 aa15.84■□□□□ 0.13
SNRNP200-202ENST00000429650 COL15A1P39059 1388 aa15.84■□□□□ 0.13
SNRNP200-202ENST00000429650 KRT85P78386 507 aa15.83■□□□□ 0.13
SNRNP200-202ENST00000429650 KIAA2012Q0VF49 1180 aa15.83■□□□□ 0.13
SNRNP200-202ENST00000429650 USPL1Q5W0Q7 1092 aa15.83■□□□□ 0.13
SNRNP200-202ENST00000429650 TTC6Q86TZ1 520 aa15.83■□□□□ 0.13
SNRNP200-202ENST00000429650 TFCP2Q12800 502 aa15.83■□□□□ 0.12
SNRNP200-202ENST00000429650 RABL6Q3YEC7 729 aaPredicted RBP15.83■□□□□ 0.12
SNRNP200-202ENST00000429650 FERMT3Q86UX7 667 aa15.83■□□□□ 0.12
SNRNP200-202ENST00000429650 ABCC6O95255 1503 aa15.83■□□□□ 0.12
SNRNP200-202ENST00000429650 COL18A1P39060 1754 aa15.83■□□□□ 0.12
SNRNP200-202ENST00000429650 ARFGEF2Q9Y6D5 1785 aa15.83■□□□□ 0.12
SNRNP200-202ENST00000429650 KDM4AO75164 1064 aa15.82■□□□□ 0.12
SNRNP200-202ENST00000429650 UBE3BQ7Z3V4 1068 aa15.82■□□□□ 0.12
SNRNP200-202ENST00000429650 TTC5Q8N0Z6 440 aa15.82■□□□□ 0.12
SNRNP200-202ENST00000429650 C19orf44Q9H6X5 657 aa15.82■□□□□ 0.12
SNRNP200-202ENST00000429650 ELP1O95163 1332 aa15.82■□□□□ 0.12
SNRNP200-202ENST00000429650 MPNDQ8N594 471 aa15.82■□□□□ 0.12
SNRNP200-202ENST00000429650 FAM173BQ6P4H8 233 aa15.81■□□□□ 0.12
SNRNP200-202ENST00000429650 DCAF5Q96JK2 942 aa15.81■□□□□ 0.12
SNRNP200-202ENST00000429650 RFX7Q2KHR2 1363 aa15.81■□□□□ 0.12
SNRNP200-202ENST00000429650 CYP27B1O15528 508 aa15.81■□□□□ 0.12
SNRNP200-202ENST00000429650 KRT32Q14532 448 aa15.81■□□□□ 0.12
SNRNP200-202ENST00000429650 FMNL2Q96PY5 1086 aa15.81■□□□□ 0.12
SNRNP200-202ENST00000429650 ZNF609O15014 1411 aa15.81■□□□□ 0.12
SNRNP200-202ENST00000429650 NDUFB9Q9Y6M9 179 aa15.81■□□□□ 0.12
SNRNP200-202ENST00000429650 UQCRHLA0A096LP55 91 aa15.8■□□□□ 0.12
SNRNP200-202ENST00000429650 ATP5J2-PTCD1G3V325 749 aa15.8■□□□□ 0.12
SNRNP200-202ENST00000429650 PTCD1O75127 700 aaKnown RBP15.8■□□□□ 0.12
SNRNP200-202ENST00000429650 UQCRHP07919 91 aa15.8■□□□□ 0.12
SNRNP200-202ENST00000429650 STK3Q13188 491 aa15.8■□□□□ 0.12
SNRNP200-202ENST00000429650 ZNF830Q96NB3 372 aaPredicted RBP15.8■□□□□ 0.12
SNRNP200-202ENST00000429650 A0A087WZG4 1122 aa15.8■□□□□ 0.12
SNRNP200-202ENST00000429650 CSB-PGBD3P0DP91 1061 aa15.8■□□□□ 0.12
SNRNP200-202ENST00000429650 CASP7P55210 303 aa15.8■□□□□ 0.12
SNRNP200-202ENST00000429650 DBNDD2Q9BQY9 259 aa15.8■□□□□ 0.12
SNRNP200-202ENST00000429650 PKD1L3Q7Z443 1732 aa15.79■□□□□ 0.12
SNRNP200-202ENST00000429650 CHGBP05060 677 aa15.79■□□□□ 0.12
SNRNP200-202ENST00000429650 CCDC192P0DO97 292 aa15.79■□□□□ 0.12
SNRNP200-202ENST00000429650 TMEM132AQ24JP5 1023 aa15.79■□□□□ 0.12
SNRNP200-202ENST00000429650 NEK1Q96PY6 1258 aa15.79■□□□□ 0.12
SNRNP200-202ENST00000429650 DNAJC2Q99543 621 aaKnown RBP15.79■□□□□ 0.12
SNRNP200-202ENST00000429650 HAUS7Q99871 368 aa15.79■□□□□ 0.12
SNRNP200-202ENST00000429650 GLI3P10071 1580 aa15.79■□□□□ 0.12
SNRNP200-202ENST00000429650 PLEKHG2Q9H7P9 1386 aa15.79■□□□□ 0.12
SNRNP200-202ENST00000429650 LIG1P18858 919 aa15.79■□□□□ 0.12
SNRNP200-202ENST00000429650 SASS6Q6UVJ0 657 aa15.79■□□□□ 0.12
SNRNP200-202ENST00000429650 CCDC129Q6ZRS4 1044 aa15.79■□□□□ 0.12
SNRNP200-202ENST00000429650 PIBF1Q8WXW3 757 aa15.79■□□□□ 0.12
SNRNP200-202ENST00000429650 TTC12Q9H892 705 aaPredicted RBP15.79■□□□□ 0.12
SNRNP200-202ENST00000429650 AP5Z1O43299 807 aa15.78■□□□□ 0.12
SNRNP200-202ENST00000429650 GTF3C6Q969F1 213 aa15.78■□□□□ 0.12
SNRNP200-202ENST00000429650 SEC62Q99442 399 aaKnown RBP15.78■□□□□ 0.12
SNRNP200-202ENST00000429650 SCAND2PQ9GZW5 306 aaPredicted RBP15.78■□□□□ 0.12
SNRNP200-202ENST00000429650 U3KPZ7 1027 aaPredicted RBP15.78■□□□□ 0.12
SNRNP200-202ENST00000429650 LAMB4A4D0S4 1761 aa15.78■□□□□ 0.12
SNRNP200-202ENST00000429650 VSIG10Q8N0Z9 540 aa15.78■□□□□ 0.12
SNRNP200-202ENST00000429650 PLBD2Q8NHP8 589 aa15.78■□□□□ 0.12
SNRNP200-202ENST00000429650 NUP62CLQ9H1M0 184 aa15.78■□□□□ 0.12
SNRNP200-202ENST00000429650 CHMP3Q9Y3E7 222 aa15.78■□□□□ 0.12
SNRNP200-202ENST00000429650 MAP3K11Q16584 847 aa15.77■□□□□ 0.12
SNRNP200-202ENST00000429650 MCMDC2Q4G0Z9 681 aa15.77■□□□□ 0.12
SNRNP200-202ENST00000429650 JAK2O60674 1132 aa15.77■□□□□ 0.11
SNRNP200-202ENST00000429650 CYP21A2P08686 494 aa15.77■□□□□ 0.11
SNRNP200-202ENST00000429650 PLCB2Q00722 1185 aa15.77■□□□□ 0.11
SNRNP200-202ENST00000429650 CHRNA2Q15822 529 aa15.77■□□□□ 0.11
SNRNP200-202ENST00000429650 CABLES1Q8TDN4 633 aa15.77■□□□□ 0.11
SNRNP200-202ENST00000429650 SPATA32Q96LK8 384 aa15.77■□□□□ 0.11
SNRNP200-202ENST00000429650 PDCL3Q9H2J4 239 aa15.77■□□□□ 0.11
SNRNP200-202ENST00000429650 TFIP11Q9UBB9 837 aaKnown RBP15.77■□□□□ 0.11
SNRNP200-202ENST00000429650 HSP90B1P14625 803 aaKnown RBP15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms