RNA–Protein interactions for RNA: ENST00000428894.1

HMGB3P5-201, Transcript of high mobility group box 3 pseudogene 5, humanhuman

BASIC

Gene HMGB3P5, Length 612 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P5-201ENST00000428894 PRDM6Q9NQX0 595 aa9.8□□□□□ -0.84
HMGB3P5-201ENST00000428894 SPDYE3A6NKU9 549 aa9.79□□□□□ -0.84
HMGB3P5-201ENST00000428894 TNFRSF10BO14763 440 aa9.79□□□□□ -0.84
HMGB3P5-201ENST00000428894 MAP3K6O95382 1288 aa9.79□□□□□ -0.84
HMGB3P5-201ENST00000428894 RARAP10276 462 aa9.79□□□□□ -0.84
HMGB3P5-201ENST00000428894 FAM26DQ5JW98 314 aa9.79□□□□□ -0.84
HMGB3P5-201ENST00000428894 LILRB5O75023 590 aa9.78□□□□□ -0.84
HMGB3P5-201ENST00000428894 XYLBO75191 536 aa9.78□□□□□ -0.84
HMGB3P5-201ENST00000428894 NUDT8Q8WV74 236 aa9.78□□□□□ -0.84
HMGB3P5-201ENST00000428894 EGFRP00533 1210 aa9.77□□□□□ -0.85
HMGB3P5-201ENST00000428894 PCSK7Q16549 785 aa9.77□□□□□ -0.85
HMGB3P5-201ENST00000428894 PSAPL1Q6NUJ1 521 aa9.77□□□□□ -0.85
HMGB3P5-201ENST00000428894 DHX32Q7L7V1 743 aaKnown RBP9.77□□□□□ -0.85
HMGB3P5-201ENST00000428894 JPH1Q9HDC5 661 aaPredicted RBP9.77□□□□□ -0.85
HMGB3P5-201ENST00000428894 KCNMB2Q9Y691 235 aa9.77□□□□□ -0.85
HMGB3P5-201ENST00000428894 C1QTNF9BB2RNN3 333 aa9.76□□□□□ -0.85
HMGB3P5-201ENST00000428894 ZBTB42B2RXF5 422 aa9.76□□□□□ -0.85
HMGB3P5-201ENST00000428894 PROCP04070 461 aa9.76□□□□□ -0.85
HMGB3P5-201ENST00000428894 NID1P14543 1247 aa9.76□□□□□ -0.85
HMGB3P5-201ENST00000428894 PRRT3Q5FWE3 981 aa9.76□□□□□ -0.85
HMGB3P5-201ENST00000428894 FAM35AQ86V20 835 aa9.76□□□□□ -0.85
HMGB3P5-201ENST00000428894 STIM2Q9P246 746 aa9.76□□□□□ -0.85
HMGB3P5-201ENST00000428894 SEPT3Q9UH03 358 aa9.76□□□□□ -0.85
HMGB3P5-201ENST00000428894 NAGPAQ9UK23 515 aa9.76□□□□□ -0.85
HMGB3P5-201ENST00000428894 SPATA31C1P0DKV0 1188 aa9.75□□□□□ -0.85
HMGB3P5-201ENST00000428894 CPB1P15086 417 aa9.75□□□□□ -0.85
HMGB3P5-201ENST00000428894 MLLT1Q03111 559 aaPredicted RBP9.75□□□□□ -0.85
HMGB3P5-201ENST00000428894 CD163Q86VB7 1156 aa9.75□□□□□ -0.85
HMGB3P5-201ENST00000428894 TMEM88BA6NKF7 163 aa9.74□□□□□ -0.85
HMGB3P5-201ENST00000428894 FAM229AH3BQW9 127 aa9.74□□□□□ -0.85
HMGB3P5-201ENST00000428894 RGS9O75916 674 aaPredicted RBP9.74□□□□□ -0.85
HMGB3P5-201ENST00000428894 TRIM28Q13263 835 aaKnown RBP9.74□□□□□ -0.85
HMGB3P5-201ENST00000428894 TRAPPC3LQ5T215 181 aa9.74□□□□□ -0.85
HMGB3P5-201ENST00000428894 TRPM4Q8TD43 1214 aa9.74□□□□□ -0.85
HMGB3P5-201ENST00000428894 PIK3R5Q8WYR1 880 aa9.74□□□□□ -0.85
HMGB3P5-201ENST00000428894 FAM13BQ9NYF5 915 aa9.74□□□□□ -0.85
HMGB3P5-201ENST00000428894 TLR7Q9NYK1 1049 aaKnown RBP9.74□□□□□ -0.85
HMGB3P5-201ENST00000428894 ARID4AP29374 1257 aaPredicted RBP9.73□□□□□ -0.85
HMGB3P5-201ENST00000428894 ZAP70P43403 619 aa9.73□□□□□ -0.85
HMGB3P5-201ENST00000428894 CHRNA4P43681 627 aa9.73□□□□□ -0.85
HMGB3P5-201ENST00000428894 GPLD1P80108 840 aa9.73□□□□□ -0.85
HMGB3P5-201ENST00000428894 ZBTB39O15060 712 aa9.72□□□□□ -0.85
HMGB3P5-201ENST00000428894 SCNN1AP37088 669 aa9.72□□□□□ -0.85
HMGB3P5-201ENST00000428894 AFF1P51825 1210 aaKnown RBP9.72□□□□□ -0.85
HMGB3P5-201ENST00000428894 HFE2Q6ZVN8 426 aa9.72□□□□□ -0.85
HMGB3P5-201ENST00000428894 ABTB2Q8N961 1025 aa9.72□□□□□ -0.85
HMGB3P5-201ENST00000428894 MMP20O60882 483 aa9.71□□□□□ -0.86
HMGB3P5-201ENST00000428894 PSAPP07602 524 aa9.71□□□□□ -0.86
HMGB3P5-201ENST00000428894 NRLP54845 237 aa9.71□□□□□ -0.86
HMGB3P5-201ENST00000428894 TRIP4Q15650 581 aaPredicted RBP9.71□□□□□ -0.86
HMGB3P5-201ENST00000428894 PERM1Q5SV97 790 aa9.71□□□□□ -0.86
HMGB3P5-201ENST00000428894 ERICH6Q7L0X2 663 aa9.71□□□□□ -0.86
HMGB3P5-201ENST00000428894 GPR152Q8TDT2 470 aa9.71□□□□□ -0.86
HMGB3P5-201ENST00000428894 LPIN3Q9BQK8 851 aa9.71□□□□□ -0.86
HMGB3P5-201ENST00000428894 UBAP1LF5GYI3 381 aa9.7□□□□□ -0.86
HMGB3P5-201ENST00000428894 SSFA2P28290 1259 aa9.7□□□□□ -0.86
HMGB3P5-201ENST00000428894 PLAURQ03405 335 aa9.7□□□□□ -0.86
HMGB3P5-201ENST00000428894 SUZ12Q15022 739 aaKnown RBP9.7□□□□□ -0.86
HMGB3P5-201ENST00000428894 ELMSAN1Q6PJG2 1045 aa9.7□□□□□ -0.86
HMGB3P5-201ENST00000428894 NLRP13Q86W25 1043 aa9.7□□□□□ -0.86
HMGB3P5-201ENST00000428894 FRRS1LQ9P0K9 344 aa9.7□□□□□ -0.86
HMGB3P5-201ENST00000428894 CARNS1A5YM72 827 aa9.69□□□□□ -0.86
HMGB3P5-201ENST00000428894 APBA3O96018 575 aa9.69□□□□□ -0.86
HMGB3P5-201ENST00000428894 BAG6P46379 1132 aa9.69□□□□□ -0.86
HMGB3P5-201ENST00000428894 J3QW42 95 aa9.68□□□□□ -0.86
HMGB3P5-201ENST00000428894 DMRTC2Q8IXT2 367 aaPredicted RBP9.68□□□□□ -0.86
HMGB3P5-201ENST00000428894 FNDC3AQ9Y2H6 1198 aaKnown RBP9.68□□□□□ -0.86
HMGB3P5-201ENST00000428894 A0A0A0MRY4 1105 aa9.67□□□□□ -0.86
HMGB3P5-201ENST00000428894 LOC102724428A0A0B4J2F2 783 aa9.67□□□□□ -0.86
HMGB3P5-201ENST00000428894 SUPT5HO00267 1087 aaKnown RBP9.67□□□□□ -0.86
HMGB3P5-201ENST00000428894 EIF2AK2P19525 551 aaKnown RBP9.67□□□□□ -0.86
HMGB3P5-201ENST00000428894 SIK1P57059 783 aa9.67□□□□□ -0.86
HMGB3P5-201ENST00000428894 GRIK4Q16099 956 aa9.67□□□□□ -0.86
HMGB3P5-201ENST00000428894 HELQQ8TDG4 1101 aa9.67□□□□□ -0.86
HMGB3P5-201ENST00000428894 NSUN5Q96P11 429 aaKnown RBP9.67□□□□□ -0.86
HMGB3P5-201ENST00000428894 SMG9Q9H0W8 520 aaKnown RBP9.67□□□□□ -0.86
HMGB3P5-201ENST00000428894 RAC1P63000 192 aa9.66□□□□□ -0.86
HMGB3P5-201ENST00000428894 GRIK5Q16478 980 aa9.66□□□□□ -0.86
HMGB3P5-201ENST00000428894 MSL1Q68DK7 614 aa9.66□□□□□ -0.86
HMGB3P5-201ENST00000428894 ATCAYQ86WG3 371 aa9.66□□□□□ -0.86
HMGB3P5-201ENST00000428894 GTF3C2Q8WUA4 911 aaPredicted RBP9.66□□□□□ -0.86
HMGB3P5-201ENST00000428894 TTC9Q92623 222 aa9.66□□□□□ -0.86
HMGB3P5-201ENST00000428894 ARID3AQ99856 593 aa9.66□□□□□ -0.86
HMGB3P5-201ENST00000428894 GHRHP01286 108 aa9.65□□□□□ -0.86
HMGB3P5-201ENST00000428894 SOX18P35713 384 aa9.65□□□□□ -0.86
HMGB3P5-201ENST00000428894 GATA4P43694 442 aa9.65□□□□□ -0.86
HMGB3P5-201ENST00000428894 NACC1Q96RE7 527 aa9.65□□□□□ -0.86
HMGB3P5-201ENST00000428894 NOM1Q5C9Z4 860 aaKnown RBP9.64□□□□□ -0.87
HMGB3P5-201ENST00000428894 TTC39BQ5VTQ0 682 aaPredicted RBP9.64□□□□□ -0.87
HMGB3P5-201ENST00000428894 ILDR2Q71H61 639 aa9.64□□□□□ -0.87
HMGB3P5-201ENST00000428894 PLD4Q96BZ4 506 aa9.64□□□□□ -0.87
HMGB3P5-201ENST00000428894 HOXD8P13378 290 aaPredicted RBP9.63□□□□□ -0.87
HMGB3P5-201ENST00000428894 WFDC8Q8IUA0 241 aa9.63□□□□□ -0.87
HMGB3P5-201ENST00000428894 OR13H1Q8NG92 308 aa9.63□□□□□ -0.87
HMGB3P5-201ENST00000428894 NUDT16Q96DE0 195 aaKnown RBP9.63□□□□□ -0.87
HMGB3P5-201ENST00000428894 RBSNQ9H1K0 784 aa9.63□□□□□ -0.87
HMGB3P5-201ENST00000428894 FURINP09958 794 aa9.62□□□□□ -0.87
HMGB3P5-201ENST00000428894 ELNP15502 786 aa9.62□□□□□ -0.87
HMGB3P5-201ENST00000428894 MPSTP25325 297 aa9.62□□□□□ -0.87
HMGB3P5-201ENST00000428894 MTMR3Q13615 1198 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms